RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 SMIM23A6NLE4 172 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 SIGLEC16A6NMB1 481 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 RBMXL2O75526 392 aaKnown RBP6.07□□□□□ -1.44
NECAP1-220ENST00000639841 CATP04040 527 aaKnown RBP6.07□□□□□ -1.44
NECAP1-220ENST00000639841 OR4E1P0C645 316 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 RANBP1P43487 201 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 DLX5P56178 289 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 DUPD1Q68J44 220 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 ZNF549Q6P9A3 640 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 C16orf82Q7Z2V1 217 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 PHF13Q86YI8 300 aaPredicted RBP6.07□□□□□ -1.44
NECAP1-220ENST00000639841 ZFP82Q8N141 532 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 VOPP1Q96AW1 172 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 FLYWCH2Q96CP2 140 aaKnown RBP6.07□□□□□ -1.44
NECAP1-220ENST00000639841 YIPF6Q96EC8 236 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 MCCC1Q96RQ3 725 aaPredicted RBP6.07□□□□□ -1.44
NECAP1-220ENST00000639841 ULBP3Q9BZM4 244 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 BCL2L14Q9BZR8 327 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 RDH14Q9HBH5 336 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 WDFY3Q8IZQ1 3526 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 ATMQ13315 3056 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 TEX15Q9BXT5 2789 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 INAFM1C9JVW0 142 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 PLPP3O14495 311 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 UTS2O95399 124 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 ACSM4P0C7M7 580 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 SERPINB8P50452 374 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 GP2P55259 537 aaKnown RBP6.06□□□□□ -1.44
NECAP1-220ENST00000639841 RPS27AP62979 156 aaKnown RBP6.06□□□□□ -1.44
NECAP1-220ENST00000639841 PGGHGQ32M88 737 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 PYCR3Q53H96 274 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 SUMO4Q6EEV6 95 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 DNAJC24Q6P3W2 148 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 Q6ZSR9 355 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 IFNEQ86WN2 208 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 TMEM251Q8N6I4 163 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 ZNF114Q8NC26 417 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 OR6F1Q8NGZ6 308 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 OR4C3Q8NH37 302 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 SLC37A2Q8TED4 501 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 HGDQ93099 445 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 CIB1Q99828 191 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 SIX2Q9NPC8 291 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 IFT46Q9NQC8 304 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 OCIAD1Q9NX40 245 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 SPTBN1Q01082 2364 aaKnown RBP6.06□□□□□ -1.44
NECAP1-220ENST00000639841 TRAV8-7A0A075B6U6 113 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 TMEM238C9JI98 176 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 ADAM10O14672 748 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 SPRY3O43610 288 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 TRAPPC6AO75865 159 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 MPZL1O95297 269 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 HBE1P02100 147 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 GSSP48637 474 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 HERV-K104P61576 105 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 NAB1Q13506 487 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 RBM48Q5RL73 367 aaKnown RBP6.06□□□□□ -1.44
NECAP1-220ENST00000639841 OR52E8Q6IFG1 317 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 ZNF66Q6ZN08 573 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 C11orf45Q8TAV5 145 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 COX14Q96I36 57 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 RNF145Q96MT1 663 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 IL17FQ96PD4 163 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 COPS4Q9BT78 406 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 KLK15Q9H2R5 256 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 TMEM38AQ9H6F2 299 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 TMBIM4Q9HC24 238 aa6.06□□□□□ -1.44
NECAP1-220ENST00000639841 SPTAN1Q13813 2472 aaKnown RBP6.05□□□□□ -1.44
NECAP1-220ENST00000639841 ZFC3H1O60293 1989 aaKnown RBP6.05□□□□□ -1.44
NECAP1-220ENST00000639841 IGLV5-52A0A0A0MRZ9 124 aa6.05□□□□□ -1.44
NECAP1-220ENST00000639841 OCM2P0CE71 109 aa6.05□□□□□ -1.44
NECAP1-220ENST00000639841 CDH1P12830 882 aa6.05□□□□□ -1.44
NECAP1-220ENST00000639841 UCHL3P15374 230 aa6.05□□□□□ -1.44
NECAP1-220ENST00000639841 CSNK2A2P19784 350 aaPredicted RBP6.05□□□□□ -1.44
NECAP1-220ENST00000639841 MSNP26038 577 aaKnown RBP6.05□□□□□ -1.44
NECAP1-220ENST00000639841 OR2B8PP59922 312 aa6.05□□□□□ -1.44
NECAP1-220ENST00000639841 LSM6P62312 80 aaKnown RBP6.05□□□□□ -1.44
NECAP1-220ENST00000639841 ARF6P62330 175 aa6.05□□□□□ -1.44
NECAP1-220ENST00000639841 C2orf54Q08AI8 447 aa6.05□□□□□ -1.44
NECAP1-220ENST00000639841 ARL16Q0P5N6 197 aa6.05□□□□□ -1.44
NECAP1-220ENST00000639841 DYNC1I2Q13409 638 aaKnown RBP6.05□□□□□ -1.44
NECAP1-220ENST00000639841 KRTAP21-3Q3LHN1 58 aa6.05□□□□□ -1.44
NECAP1-220ENST00000639841 DCST2Q5T1A1 773 aa6.05□□□□□ -1.44
NECAP1-220ENST00000639841 DCUN1D2Q6PH85 259 aa6.05□□□□□ -1.44
NECAP1-220ENST00000639841 SSX7Q7RTT5 188 aa6.05□□□□□ -1.44
NECAP1-220ENST00000639841 RAB43Q86YS6 212 aa6.05□□□□□ -1.44
NECAP1-220ENST00000639841 Q8N402 240 aa6.05□□□□□ -1.44
NECAP1-220ENST00000639841 LFNGQ8NES3 379 aa6.05□□□□□ -1.44
NECAP1-220ENST00000639841 OR9A4Q8NGU2 314 aa6.05□□□□□ -1.44
NECAP1-220ENST00000639841 RASL10AQ92737 203 aa6.05□□□□□ -1.44
NECAP1-220ENST00000639841 SLC35B4Q969S0 331 aa6.05□□□□□ -1.44
NECAP1-220ENST00000639841 PRAP1Q96NZ9 151 aa6.05□□□□□ -1.44
NECAP1-220ENST00000639841 MCUBQ9NWR8 336 aa6.05□□□□□ -1.44
NECAP1-220ENST00000639841 RARRES3Q9UL19 164 aa6.05□□□□□ -1.44
NECAP1-220ENST00000639841 SLC22A13Q9Y226 551 aa6.05□□□□□ -1.44
NECAP1-220ENST00000639841 HS3ST3B1Q9Y662 390 aa6.05□□□□□ -1.44
NECAP1-220ENST00000639841 ARHGEF17Q96PE2 2063 aaPredicted RBP6.05□□□□□ -1.44
NECAP1-220ENST00000639841 USP9XQ93008 2570 aaPredicted RBP6.04□□□□□ -1.44
NECAP1-220ENST00000639841 E5RI56 91 aa6.04□□□□□ -1.44
NECAP1-220ENST00000639841 FAM72CH0Y354 149 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms