RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 SUPT4H1P63272 117 aaKnown RBP17.77■□□□□ 0.43
SYNGAP1-227ENST00000638142 S100A12P80511 92 aa17.77■□□□□ 0.43
SYNGAP1-227ENST00000638142 PLPPR5Q32ZL2 321 aa17.77■□□□□ 0.43
SYNGAP1-227ENST00000638142 PLEKHN1Q494U1 663 aaPredicted RBP17.77■□□□□ 0.43
SYNGAP1-227ENST00000638142 H3F3CQ6NXT2 135 aa17.77■□□□□ 0.43
SYNGAP1-227ENST00000638142 DOK3Q7L591 496 aa17.77■□□□□ 0.43
SYNGAP1-227ENST00000638142 ARHGAP5-AS1Q96IT6 56 aa17.77■□□□□ 0.43
SYNGAP1-227ENST00000638142 SOX7Q9BT81 388 aa17.77■□□□□ 0.43
SYNGAP1-227ENST00000638142 SEC11CQ9BY50 192 aa17.77■□□□□ 0.43
SYNGAP1-227ENST00000638142 TLNRD1Q9H1K6 362 aa17.77■□□□□ 0.43
SYNGAP1-227ENST00000638142 CRTAPO75718 401 aaPredicted RBP17.76■□□□□ 0.43
SYNGAP1-227ENST00000638142 PIAS2O75928 621 aa17.76■□□□□ 0.43
SYNGAP1-227ENST00000638142 PET100P0DJ07 73 aa17.76■□□□□ 0.43
SYNGAP1-227ENST00000638142 SLC2A1P11166 492 aa17.76■□□□□ 0.43
SYNGAP1-227ENST00000638142 ZNF17P17021 662 aa17.76■□□□□ 0.43
SYNGAP1-227ENST00000638142 AMY2BP19961 511 aa17.76■□□□□ 0.43
SYNGAP1-227ENST00000638142 ZNF585AQ6P3V2 769 aa17.76■□□□□ 0.43
SYNGAP1-227ENST00000638142 SLC25A47Q6Q0C1 308 aa17.76■□□□□ 0.43
SYNGAP1-227ENST00000638142 ROBO4Q8WZ75 1007 aa17.76■□□□□ 0.43
SYNGAP1-227ENST00000638142 FAM71F1Q96KD3 344 aaPredicted RBP17.76■□□□□ 0.43
SYNGAP1-227ENST00000638142 GPER1Q99527 375 aa17.76■□□□□ 0.43
SYNGAP1-227ENST00000638142 RTBDNQ9BSG5 229 aaPredicted RBP17.76■□□□□ 0.43
SYNGAP1-227ENST00000638142 ESRP2Q9H6T0 727 aaKnown RBP17.76■□□□□ 0.43
SYNGAP1-227ENST00000638142 ASH2LQ9UBL3 628 aa17.76■□□□□ 0.43
SYNGAP1-227ENST00000638142 DNAJB11Q9UBS4 358 aa17.76■□□□□ 0.43
SYNGAP1-227ENST00000638142 TRAF3IP2O43734 574 aaPredicted RBP17.76■□□□□ 0.43
SYNGAP1-227ENST00000638142 SRSF3P84103 164 aaKnown RBP17.76■□□□□ 0.43
SYNGAP1-227ENST00000638142 ARFRP1Q13795 201 aa17.76■□□□□ 0.43
SYNGAP1-227ENST00000638142 OR4A4PQ8NGN8 299 aa17.76■□□□□ 0.43
SYNGAP1-227ENST00000638142 SSC4DQ8WTU2 575 aa17.76■□□□□ 0.43
SYNGAP1-227ENST00000638142 ZNF768Q9H5H4 540 aaKnown RBP17.76■□□□□ 0.43
SYNGAP1-227ENST00000638142 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.76■□□□□ 0.43
SYNGAP1-227ENST00000638142 LPAR3Q9UBY5 353 aa17.76■□□□□ 0.43
SYNGAP1-227ENST00000638142 IGLV3-12A0A075B6K2 115 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 MSGN1A6NI15 193 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 HEXAP06865 529 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 CDAP32320 146 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 P2RY4P51582 365 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 TAS2R46P59540 309 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 EIF3IQ13347 325 aaKnown RBP17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 ANKRD55Q3KP44 614 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 NSUN5P2Q63ZY6 315 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 FAM89BQ8N5H3 189 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 OR13G1Q8NGZ3 307 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 POC1BQ8TC44 478 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 C2orf50Q96LR7 162 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 OR10A2Q9H208 303 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 PNRC2Q9NPJ4 139 aaKnown RBP17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 ZFP57Q9NU63 452 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 OR5AC2Q9NZP5 309 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 ZNF319Q9P2F9 582 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 OSGIN2Q9Y236 505 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 ADAMTS9Q9P2N4 1935 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 A0A1W2PP11 408 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 OR3A2P47893 321 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 PJVKQ0ZLH3 352 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 MFAP5Q13361 173 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 KCNMB1Q16558 191 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 RHBDD2Q6NTF9 364 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 CADM4Q8NFZ8 388 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 OR6X1Q8NH79 312 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 RHBDD1Q8TEB9 315 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 SAT2Q96F10 170 aaPredicted RBP17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 USB1Q9BQ65 265 aaKnown RBP17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 SLC26A1Q9H2B4 701 aa17.75■□□□□ 0.43
SYNGAP1-227ENST00000638142 IGLV3-32A0A0A0MS00 114 aa17.74■□□□□ 0.43
SYNGAP1-227ENST00000638142 ZNF705EA8MWA4 302 aaPredicted RBP17.74■□□□□ 0.43
SYNGAP1-227ENST00000638142 HEXBP07686 556 aa17.74■□□□□ 0.43
SYNGAP1-227ENST00000638142 GLB1P16278 677 aa17.74■□□□□ 0.43
SYNGAP1-227ENST00000638142 EIF5AP63241 154 aaKnown RBP17.74■□□□□ 0.43
SYNGAP1-227ENST00000638142 AADACL3Q5VUY0 350 aa17.74■□□□□ 0.43
SYNGAP1-227ENST00000638142 PNLDC1Q8NA58 520 aaKnown RBP17.74■□□□□ 0.43
SYNGAP1-227ENST00000638142 DMBX1Q8NFW5 382 aa17.74■□□□□ 0.43
SYNGAP1-227ENST00000638142 LILRB1Q8NHL6 650 aaPredicted RBP17.74■□□□□ 0.43
SYNGAP1-227ENST00000638142 SLC7A5P2Q9GIP4 190 aa17.74■□□□□ 0.43
SYNGAP1-227ENST00000638142 PCED1AQ9H1Q7 454 aa17.74■□□□□ 0.43
SYNGAP1-227ENST00000638142 METTL8Q9H825 291 aaKnown RBP17.74■□□□□ 0.43
SYNGAP1-227ENST00000638142 UQCC1Q9NVA1 299 aa17.74■□□□□ 0.43
SYNGAP1-227ENST00000638142 GHRLQ9UBU3 117 aa17.74■□□□□ 0.43
SYNGAP1-227ENST00000638142 TRBV11-1A0A0K0K1C0 115 aa17.74■□□□□ 0.43
SYNGAP1-227ENST00000638142 RER1O15258 196 aa17.74■□□□□ 0.43
SYNGAP1-227ENST00000638142 CSTBP04080 98 aaKnown RBP17.74■□□□□ 0.43
SYNGAP1-227ENST00000638142 PI3P19957 117 aa17.74■□□□□ 0.43
SYNGAP1-227ENST00000638142 GRB2P62993 217 aaKnown RBP17.74■□□□□ 0.43
SYNGAP1-227ENST00000638142 MST1LQ2TV78 715 aa17.74■□□□□ 0.43
SYNGAP1-227ENST00000638142 ADAMTS17Q8TE56 1095 aa17.74■□□□□ 0.43
SYNGAP1-227ENST00000638142 GLYATL2Q8WU03 294 aa17.74■□□□□ 0.43
SYNGAP1-227ENST00000638142 WNT2BQ93097 391 aa17.74■□□□□ 0.43
SYNGAP1-227ENST00000638142 MESP1Q9BRJ9 268 aa17.74■□□□□ 0.43
SYNGAP1-227ENST00000638142 TREM1Q9NP99 234 aa17.74■□□□□ 0.43
SYNGAP1-227ENST00000638142 FIGNL2A6NMB9 653 aa17.73■□□□□ 0.43
SYNGAP1-227ENST00000638142 NPBWR1P48145 328 aa17.73■□□□□ 0.43
SYNGAP1-227ENST00000638142 FAM57BQ71RH2 274 aa17.73■□□□□ 0.43
SYNGAP1-227ENST00000638142 ZNF283Q8N7M2 679 aa17.73■□□□□ 0.43
SYNGAP1-227ENST00000638142 POC1AQ8NBT0 407 aa17.73■□□□□ 0.43
SYNGAP1-227ENST00000638142 OR5L2Q8NGL0 311 aa17.73■□□□□ 0.43
SYNGAP1-227ENST00000638142 OR10C1Q96KK4 312 aa17.73■□□□□ 0.43
SYNGAP1-227ENST00000638142 SLC5A7Q9GZV3 580 aa17.73■□□□□ 0.43
SYNGAP1-227ENST00000638142 BRWD1Q9NSI6 2320 aa17.73■□□□□ 0.43
SYNGAP1-227ENST00000638142 IGKV1-9A0A0C4DH69 117 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms