RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 JMJD6Q6NYC1 403 aaPredicted RBP18.84■□□□□ 0.61
CLN6-224ENST00000638076 DHRS13Q6UX07 377 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 C17orf107Q6ZR85 190 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.84■□□□□ 0.61
CLN6-224ENST00000638076 FAM109AQ8N4B1 249 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 CHST5Q9GZS9 411 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 NCOR1O75376 2440 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 RTTNQ86VV8 2226 aa18.83■□□□□ 0.61
CLN6-224ENST00000638076 H3BUI4 141 aa18.83■□□□□ 0.61
CLN6-224ENST00000638076 TERTO14746 1132 aaKnown RBP18.83■□□□□ 0.61
CLN6-224ENST00000638076 SYNGR3O43761 229 aa18.83■□□□□ 0.61
CLN6-224ENST00000638076 MTRF1O75570 445 aaKnown RBP18.83■□□□□ 0.61
CLN6-224ENST00000638076 CRYGSP22914 178 aa18.83■□□□□ 0.61
CLN6-224ENST00000638076 SFRP5Q5T4F7 317 aa18.83■□□□□ 0.61
CLN6-224ENST00000638076 ZNF774Q6NX45 483 aa18.83■□□□□ 0.61
CLN6-224ENST00000638076 C11orf88Q6PI97 169 aa18.83■□□□□ 0.61
CLN6-224ENST00000638076 ABHD3Q8WU67 409 aa18.83■□□□□ 0.61
CLN6-224ENST00000638076 PP6455Q8WZ26 134 aa18.83■□□□□ 0.61
CLN6-224ENST00000638076 CPNE4Q96A23 557 aaPredicted RBP18.83■□□□□ 0.61
CLN6-224ENST00000638076 FAM173AQ9BQD7 235 aa18.83■□□□□ 0.61
CLN6-224ENST00000638076 OR10A2Q9H208 303 aa18.83■□□□□ 0.61
CLN6-224ENST00000638076 VSIG4Q9Y279 399 aa18.83■□□□□ 0.61
CLN6-224ENST00000638076 PLEKHA6Q9Y2H5 1048 aa18.83■□□□□ 0.61
CLN6-224ENST00000638076 LOC100509620A0A075B734 347 aa18.83■□□□□ 0.6
CLN6-224ENST00000638076 F5H5P2 479 aa18.83■□□□□ 0.6
CLN6-224ENST00000638076 PTGFRP43088 359 aa18.83■□□□□ 0.6
CLN6-224ENST00000638076 TMEM50BP56557 158 aa18.83■□□□□ 0.6
CLN6-224ENST00000638076 EIF3IQ13347 325 aaKnown RBP18.83■□□□□ 0.6
CLN6-224ENST00000638076 Q6ZSR3 168 aa18.83■□□□□ 0.6
CLN6-224ENST00000638076 C1QL2Q7Z5L3 287 aa18.83■□□□□ 0.6
CLN6-224ENST00000638076 OR2M7Q8NG81 312 aa18.83■□□□□ 0.6
CLN6-224ENST00000638076 SGK3Q96BR1 496 aa18.83■□□□□ 0.6
CLN6-224ENST00000638076 ELMOD3Q96FG2 381 aa18.83■□□□□ 0.6
CLN6-224ENST00000638076 HES7Q9BYE0 225 aa18.83■□□□□ 0.6
CLN6-224ENST00000638076 MYOZ1Q9NP98 299 aaPredicted RBP18.83■□□□□ 0.6
CLN6-224ENST00000638076 BDP1A6H8Y1 2624 aa18.82■□□□□ 0.6
CLN6-224ENST00000638076 STMND1H3BQB6 276 aa18.82■□□□□ 0.6
CLN6-224ENST00000638076 CYTIPO60759 359 aa18.82■□□□□ 0.6
CLN6-224ENST00000638076 SLC22A5O76082 557 aa18.82■□□□□ 0.6
CLN6-224ENST00000638076 GSTP1P09211 210 aaKnown RBP18.82■□□□□ 0.6
CLN6-224ENST00000638076 PATE4P0C8F1 98 aa18.82■□□□□ 0.6
CLN6-224ENST00000638076 HIST1H1DP16402 221 aaKnown RBP18.82■□□□□ 0.6
CLN6-224ENST00000638076 CXCL2P19875 107 aa18.82■□□□□ 0.6
CLN6-224ENST00000638076 ITGA3P26006 1051 aa18.82■□□□□ 0.6
CLN6-224ENST00000638076 AVPR2P30518 371 aa18.82■□□□□ 0.6
CLN6-224ENST00000638076 DCAF10Q5QP82 559 aa18.82■□□□□ 0.6
CLN6-224ENST00000638076 OR52H1Q8NGJ2 320 aa18.82■□□□□ 0.6
CLN6-224ENST00000638076 FOXB1Q99853 325 aa18.82■□□□□ 0.6
CLN6-224ENST00000638076 URM1Q9BTM9 101 aaKnown RBP18.82■□□□□ 0.6
CLN6-224ENST00000638076 TMPRSS13Q9BYE2 586 aa18.82■□□□□ 0.6
CLN6-224ENST00000638076 PCDHGA1Q9Y5H4 931 aa18.82■□□□□ 0.6
CLN6-224ENST00000638076 AHCTF1Q8WYP5 2266 aa18.82■□□□□ 0.6
CLN6-224ENST00000638076 ZNF32P17041 273 aa18.82■□□□□ 0.6
CLN6-224ENST00000638076 NFYAP23511 347 aaPredicted RBP18.82■□□□□ 0.6
CLN6-224ENST00000638076 MPZP25189 248 aa18.82■□□□□ 0.6
CLN6-224ENST00000638076 CEACAM16Q2WEN9 425 aa18.82■□□□□ 0.6
CLN6-224ENST00000638076 DRAM2Q6UX65 266 aa18.82■□□□□ 0.6
CLN6-224ENST00000638076 OR8H3Q8N146 312 aa18.82■□□□□ 0.6
CLN6-224ENST00000638076 C12orf45Q8N5I9 185 aaPredicted RBP18.82■□□□□ 0.6
CLN6-224ENST00000638076 OR56B1Q8NGI3 324 aa18.82■□□□□ 0.6
CLN6-224ENST00000638076 OR1F12Q8NHA8 337 aa18.82■□□□□ 0.6
CLN6-224ENST00000638076 MRGPRFQ96AM1 343 aa18.82■□□□□ 0.6
CLN6-224ENST00000638076 CYYR1Q96J86 154 aa18.82■□□□□ 0.6
CLN6-224ENST00000638076 CST11Q9H112 138 aa18.82■□□□□ 0.6
CLN6-224ENST00000638076 FCGR2AP12318 317 aa18.81■□□□□ 0.6
CLN6-224ENST00000638076 HGFACQ04756 655 aa18.81■□□□□ 0.6
CLN6-224ENST00000638076 SCRN3Q0VDG4 424 aa18.81■□□□□ 0.6
CLN6-224ENST00000638076 MPPED2Q15777 294 aa18.81■□□□□ 0.6
CLN6-224ENST00000638076 OR2AE1Q8NHA4 323 aa18.81■□□□□ 0.6
CLN6-224ENST00000638076 AKR7LQ8NHP1 331 aa18.81■□□□□ 0.6
CLN6-224ENST00000638076 ADAMTS17Q8TE56 1095 aa18.81■□□□□ 0.6
CLN6-224ENST00000638076 PIGTQ969N2 578 aa18.81■□□□□ 0.6
CLN6-224ENST00000638076 C10orf35Q96D05 121 aa18.81■□□□□ 0.6
CLN6-224ENST00000638076 ZNF703Q9H7S9 590 aaPredicted RBP18.81■□□□□ 0.6
CLN6-224ENST00000638076 B3GNT2Q9NY97 397 aa18.81■□□□□ 0.6
CLN6-224ENST00000638076 M0R233 179 aa18.8■□□□□ 0.6
CLN6-224ENST00000638076 CELA3AP09093 270 aa18.8■□□□□ 0.6
CLN6-224ENST00000638076 HOXD11P31277 338 aaPredicted RBP18.8■□□□□ 0.6
CLN6-224ENST00000638076 DHRS2Q13268 280 aa18.8■□□□□ 0.6
CLN6-224ENST00000638076 EXOSC2Q13868 293 aaKnown RBP18.8■□□□□ 0.6
CLN6-224ENST00000638076 ZMYND11Q15326 602 aa18.8■□□□□ 0.6
CLN6-224ENST00000638076 FAM189A2Q15884 450 aa18.8■□□□□ 0.6
CLN6-224ENST00000638076 PDSS1Q5T2R2 415 aa18.8■□□□□ 0.6
CLN6-224ENST00000638076 CCDC54Q8NEL0 328 aa18.8■□□□□ 0.6
CLN6-224ENST00000638076 ARHGAP5-AS1Q96IT6 56 aa18.8■□□□□ 0.6
CLN6-224ENST00000638076 CITED4Q96RK1 184 aa18.8■□□□□ 0.6
CLN6-224ENST00000638076 IRF2BPLQ9H1B7 796 aa18.8■□□□□ 0.6
CLN6-224ENST00000638076 GHRLQ9UBU3 117 aa18.8■□□□□ 0.6
CLN6-224ENST00000638076 L7N2F9 121 aa18.8■□□□□ 0.6
CLN6-224ENST00000638076 PMP2P02689 132 aa18.8■□□□□ 0.6
CLN6-224ENST00000638076 LIPCP11150 499 aa18.8■□□□□ 0.6
CLN6-224ENST00000638076 NAT2P11245 290 aa18.8■□□□□ 0.6
CLN6-224ENST00000638076 ALDH3B1P43353 468 aa18.8■□□□□ 0.6
CLN6-224ENST00000638076 RPS27AP62979 156 aaKnown RBP18.8■□□□□ 0.6
CLN6-224ENST00000638076 OPCMLQ14982 345 aa18.8■□□□□ 0.6
CLN6-224ENST00000638076 OR1C1Q15619 314 aa18.8■□□□□ 0.6
CLN6-224ENST00000638076 HES3Q5TGS1 186 aa18.8■□□□□ 0.6
CLN6-224ENST00000638076 OR51T1Q8NGJ9 327 aa18.8■□□□□ 0.6
CLN6-224ENST00000638076 OR10K1Q8NGX5 313 aa18.8■□□□□ 0.6
CLN6-224ENST00000638076 HAS2Q92819 552 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms