RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 GSK3AP49840 483 aa15.23■□□□□ 0.03
CLN6-220ENST00000637450 CSNK2BP67870 215 aa15.23■□□□□ 0.03
CLN6-220ENST00000637450 ELF3P78545 371 aaPredicted RBP15.23■□□□□ 0.03
CLN6-220ENST00000637450 OCLNQ16625 522 aa15.23■□□□□ 0.03
CLN6-220ENST00000637450 CDONQ4KMG0 1287 aa15.23■□□□□ 0.03
CLN6-220ENST00000637450 KLHL12Q53G59 568 aa15.23■□□□□ 0.03
CLN6-220ENST00000637450 LCN8Q6JVE9 175 aa15.23■□□□□ 0.03
CLN6-220ENST00000637450 DUX4L9Q6RFH8 374 aaPredicted RBP15.23■□□□□ 0.03
CLN6-220ENST00000637450 WDR82Q6UXN9 313 aa15.23■□□□□ 0.03
CLN6-220ENST00000637450 FAM57BQ71RH2 274 aa15.23■□□□□ 0.03
CLN6-220ENST00000637450 ERI1Q8IV48 349 aaKnown RBP15.23■□□□□ 0.03
CLN6-220ENST00000637450 FGFRL1Q8N441 504 aa15.23■□□□□ 0.03
CLN6-220ENST00000637450 LY6G5BQ8NDX9 201 aa15.23■□□□□ 0.03
CLN6-220ENST00000637450 DYRK2Q92630 601 aa15.23■□□□□ 0.03
CLN6-220ENST00000637450 PPP1R3EQ9H7J1 279 aa15.23■□□□□ 0.03
CLN6-220ENST00000637450 REEP1Q9H902 201 aa15.23■□□□□ 0.03
CLN6-220ENST00000637450 MED20Q9H944 212 aa15.23■□□□□ 0.03
CLN6-220ENST00000637450 PDP1Q9P0J1 537 aaPredicted RBP15.23■□□□□ 0.03
CLN6-220ENST00000637450 ZNF319Q9P2F9 582 aa15.23■□□□□ 0.03
CLN6-220ENST00000637450 DUX4Q9UBX2 424 aa15.23■□□□□ 0.03
CLN6-220ENST00000637450 RHBDD3Q9Y3P4 386 aa15.23■□□□□ 0.03
CLN6-220ENST00000637450 KPTNQ9Y664 436 aa15.23■□□□□ 0.03
CLN6-220ENST00000637450 A0A0U1RQK1 487 aa15.22■□□□□ 0.03
CLN6-220ENST00000637450 FAM183AA6NL82 134 aa15.22■□□□□ 0.03
CLN6-220ENST00000637450 B2RBV5 119 aa15.22■□□□□ 0.03
CLN6-220ENST00000637450 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.22■□□□□ 0.03
CLN6-220ENST00000637450 CFL1P23528 166 aaKnown RBP15.22■□□□□ 0.03
CLN6-220ENST00000637450 OPRL1P41146 370 aa15.22■□□□□ 0.03
CLN6-220ENST00000637450 NAA10P41227 235 aaPredicted RBP15.22■□□□□ 0.03
CLN6-220ENST00000637450 IER3P46695 156 aa15.22■□□□□ 0.03
CLN6-220ENST00000637450 ZNF121P58317 390 aaPredicted RBP15.22■□□□□ 0.03
CLN6-220ENST00000637450 MS4A2Q01362 244 aa15.22■□□□□ 0.03
CLN6-220ENST00000637450 DEFA6Q01524 100 aa15.22■□□□□ 0.03
CLN6-220ENST00000637450 TRIM25Q14258 630 aaKnown RBP15.22■□□□□ 0.03
CLN6-220ENST00000637450 WDR38Q5JTN6 314 aa15.22■□□□□ 0.03
CLN6-220ENST00000637450 SHFQ7M4L6 423 aa15.22■□□□□ 0.03
CLN6-220ENST00000637450 DHFR2Q86XF0 187 aa15.22■□□□□ 0.03
CLN6-220ENST00000637450 LDLRAD3Q86YD5 345 aa15.22■□□□□ 0.03
CLN6-220ENST00000637450 ARHGAP24Q8N264 748 aa15.22■□□□□ 0.03
CLN6-220ENST00000637450 CSNK2A3Q8NEV1 391 aa15.22■□□□□ 0.03
CLN6-220ENST00000637450 OR6N2Q8NGY6 317 aa15.22■□□□□ 0.03
CLN6-220ENST00000637450 C12orf43Q96C57 262 aaKnown RBP15.22■□□□□ 0.03
CLN6-220ENST00000637450 DMRTB1Q96MA1 342 aa15.22■□□□□ 0.03
CLN6-220ENST00000637450 AMELYQ99218 206 aa15.22■□□□□ 0.03
CLN6-220ENST00000637450 CITED1Q99966 193 aa15.22■□□□□ 0.03
CLN6-220ENST00000637450 NIPSNAP1Q9BPW8 284 aa15.22■□□□□ 0.03
CLN6-220ENST00000637450 TLNRD1Q9H1K6 362 aa15.22■□□□□ 0.03
CLN6-220ENST00000637450 OR10A2Q9H208 303 aa15.22■□□□□ 0.03
CLN6-220ENST00000637450 MUC13Q9H3R2 512 aa15.22■□□□□ 0.03
CLN6-220ENST00000637450 DNAJC27Q9NZQ0 273 aa15.22■□□□□ 0.03
CLN6-220ENST00000637450 VWFP04275 2813 aa15.22■□□□□ 0.03
CLN6-220ENST00000637450 CDIPTO14735 213 aa15.21■□□□□ 0.03
CLN6-220ENST00000637450 GLCEO94923 617 aa15.21■□□□□ 0.03
CLN6-220ENST00000637450 IGHV4-59P01825 116 aa15.21■□□□□ 0.03
CLN6-220ENST00000637450 GYS2P54840 703 aa15.21■□□□□ 0.03
CLN6-220ENST00000637450 GNGT1P63211 74 aa15.21■□□□□ 0.03
CLN6-220ENST00000637450 FAM98BQ52LJ0 330 aaKnown RBP15.21■□□□□ 0.03
CLN6-220ENST00000637450 ATPAF1Q5TC12 328 aaPredicted RBP15.21■□□□□ 0.03
CLN6-220ENST00000637450 SLC36A1Q7Z2H8 476 aa15.21■□□□□ 0.03
CLN6-220ENST00000637450 VMO1Q7Z5L0 202 aa15.21■□□□□ 0.03
CLN6-220ENST00000637450 PDZD9Q8IXQ8 264 aa15.21■□□□□ 0.03
CLN6-220ENST00000637450 TIGD4Q8IY51 512 aa15.21■□□□□ 0.03
CLN6-220ENST00000637450 GALNT4Q8N4A0 578 aa15.21■□□□□ 0.03
CLN6-220ENST00000637450 PIP4P2Q8N4L2 257 aa15.21■□□□□ 0.03
CLN6-220ENST00000637450 SCCPDHQ8NBX0 429 aa15.21■□□□□ 0.03
CLN6-220ENST00000637450 OR10G2Q8NGC3 310 aa15.21■□□□□ 0.03
CLN6-220ENST00000637450 ITPKCQ96DU7 683 aa15.21■□□□□ 0.03
CLN6-220ENST00000637450 SEH1LQ96EE3 360 aa15.21■□□□□ 0.03
CLN6-220ENST00000637450 RGCCQ9H4X1 137 aa15.21■□□□□ 0.03
CLN6-220ENST00000637450 A0A1B0GVI7 797 aa15.2■□□□□ 0.02
CLN6-220ENST00000637450 ACOT8O14734 319 aa15.2■□□□□ 0.02
CLN6-220ENST00000637450 GPR37O15354 613 aa15.2■□□□□ 0.02
CLN6-220ENST00000637450 GPR137BO60478 399 aa15.2■□□□□ 0.02
CLN6-220ENST00000637450 AMY2BP19961 511 aa15.2■□□□□ 0.02
CLN6-220ENST00000637450 GNALP38405 381 aa15.2■□□□□ 0.02
CLN6-220ENST00000637450 TGM4P49221 684 aa15.2■□□□□ 0.02
CLN6-220ENST00000637450 IL5RAQ01344 420 aa15.2■□□□□ 0.02
CLN6-220ENST00000637450 GFOD2Q3B7J2 385 aa15.2■□□□□ 0.02
CLN6-220ENST00000637450 PDLIM3Q53GG5 364 aaPredicted RBP15.2■□□□□ 0.02
CLN6-220ENST00000637450 IQCF1Q8N6M8 205 aa15.2■□□□□ 0.02
CLN6-220ENST00000637450 FAM216BQ8N7L0 139 aa15.2■□□□□ 0.02
CLN6-220ENST00000637450 TEX47Q8TBZ9 253 aa15.2■□□□□ 0.02
CLN6-220ENST00000637450 OTULINQ96BN8 352 aa15.2■□□□□ 0.02
CLN6-220ENST00000637450 PGAM5Q96HS1 289 aa15.2■□□□□ 0.02
CLN6-220ENST00000637450 NSL1Q96IY1 281 aa15.2■□□□□ 0.02
CLN6-220ENST00000637450 FEVQ99581 238 aa15.2■□□□□ 0.02
CLN6-220ENST00000637450 MICU1Q9BPX6 476 aa15.2■□□□□ 0.02
CLN6-220ENST00000637450 PAPOLGQ9BWT3 736 aaKnown RBP15.2■□□□□ 0.02
CLN6-220ENST00000637450 BRD7Q9NPI1 651 aa15.2■□□□□ 0.02
CLN6-220ENST00000637450 NDUFB3O43676 98 aa15.19■□□□□ 0.02
CLN6-220ENST00000637450 H2BFMP0C1H6 154 aa15.19■□□□□ 0.02
CLN6-220ENST00000637450 KRTAP10-3P60369 221 aa15.19■□□□□ 0.02
CLN6-220ENST00000637450 GK3PQ14409 553 aa15.19■□□□□ 0.02
CLN6-220ENST00000637450 SNCBQ16143 134 aa15.19■□□□□ 0.02
CLN6-220ENST00000637450 BRICD5Q6PL45 260 aa15.19■□□□□ 0.02
CLN6-220ENST00000637450 METAP1DQ6UB28 335 aaPredicted RBP15.19■□□□□ 0.02
CLN6-220ENST00000637450 LINC01006Q8NI28 216 aa15.19■□□□□ 0.02
CLN6-220ENST00000637450 NPRL2Q8WTW4 380 aa15.19■□□□□ 0.02
CLN6-220ENST00000637450 OR51V1Q9H2C8 321 aa15.19■□□□□ 0.02
CLN6-220ENST00000637450 HAO2Q9NYQ3 351 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms