RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 GLIPR2Q9H4G4 154 aa2.56□□□□□ -2
VIM-210ENST00000637053 PRORYQ9H606 182 aa2.56□□□□□ -2
VIM-210ENST00000637053 REEP4Q9H6H4 257 aa2.56□□□□□ -2
VIM-210ENST00000637053 METTL17Q9H7H0 456 aaPredicted RBP2.56□□□□□ -2
VIM-210ENST00000637053 CALML5Q9NZT1 146 aa2.56□□□□□ -2
VIM-210ENST00000637053 ARMCX1Q9P291 453 aa2.56□□□□□ -2
VIM-210ENST00000637053 BAIAP2Q9UQB8 552 aa2.56□□□□□ -2
VIM-210ENST00000637053 FBXO7Q9Y3I1 522 aa2.56□□□□□ -2
VIM-210ENST00000637053 SIRT4Q9Y6E7 314 aaPredicted RBP2.56□□□□□ -2
VIM-210ENST00000637053 PLEKHH1Q9ULM0 1364 aa2.56□□□□□ -2
VIM-210ENST00000637053 MAGI1Q96QZ7 1491 aaPredicted RBP2.56□□□□□ -2
VIM-210ENST00000637053 FAM135AQ9P2D6 1515 aa2.56□□□□□ -2
VIM-210ENST00000637053 OVOS2A0A0J9YW53 1432 aa2.55□□□□□ -2
VIM-210ENST00000637053 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.55□□□□□ -2
VIM-210ENST00000637053 A0A1W2PRE2 83 aa2.55□□□□□ -2
VIM-210ENST00000637053 TCRBV9S1A1TA0A576 114 aa2.55□□□□□ -2
VIM-210ENST00000637053 C20orf202A1L168 122 aa2.55□□□□□ -2
VIM-210ENST00000637053 MAP1LC3B2A6NCE7 125 aa2.55□□□□□ -2
VIM-210ENST00000637053 LINC00862A6NCI5 91 aa2.55□□□□□ -2
VIM-210ENST00000637053 LRIT2A6NDA9 550 aa2.55□□□□□ -2
VIM-210ENST00000637053 GLTPD2A6NH11 291 aa2.55□□□□□ -2
VIM-210ENST00000637053 OR4C46A6NHA9 309 aa2.55□□□□□ -2
VIM-210ENST00000637053 CEACAM18A8MTB9 384 aa2.55□□□□□ -2
VIM-210ENST00000637053 LEUTXA8MZ59 168 aa2.55□□□□□ -2
VIM-210ENST00000637053 F6UZH7 168 aa2.55□□□□□ -2
VIM-210ENST00000637053 M0R143 59 aa2.55□□□□□ -2
VIM-210ENST00000637053 EI24O14681 340 aa2.55□□□□□ -2
VIM-210ENST00000637053 MFSD11O43934 449 aa2.55□□□□□ -2
VIM-210ENST00000637053 KIF1BO60333 1816 aa2.55□□□□□ -2
VIM-210ENST00000637053 GPR137BO60478 399 aa2.55□□□□□ -2
VIM-210ENST00000637053 SCO1O75880 301 aa2.55□□□□□ -2
VIM-210ENST00000637053 NDUFB4O95168 129 aa2.55□□□□□ -2
VIM-210ENST00000637053 LSM8O95777 96 aaKnown RBP2.55□□□□□ -2
VIM-210ENST00000637053 CLIC3O95833 236 aa2.55□□□□□ -2
VIM-210ENST00000637053 CD8AP01732 235 aa2.55□□□□□ -2
VIM-210ENST00000637053 EDN1P05305 212 aa2.55□□□□□ -2
VIM-210ENST00000637053 IL6RP08887 468 aaPredicted RBP2.55□□□□□ -2
VIM-210ENST00000637053 MPC1LP0DKB6 136 aa2.55□□□□□ -2
VIM-210ENST00000637053 SDC1P18827 310 aa2.55□□□□□ -2
VIM-210ENST00000637053 CD58P19256 250 aa2.55□□□□□ -2
VIM-210ENST00000637053 KRTAP5-9P26371 169 aa2.55□□□□□ -2
VIM-210ENST00000637053 AVPR1BP47901 424 aa2.55□□□□□ -2
VIM-210ENST00000637053 NUP153P49790 1475 aaKnown RBP2.55□□□□□ -2
VIM-210ENST00000637053 RORCP51449 518 aa2.55□□□□□ -2
VIM-210ENST00000637053 TDGF1P3P51864 188 aa2.55□□□□□ -2
VIM-210ENST00000637053 ZNF133P52736 654 aaPredicted RBP2.55□□□□□ -2
VIM-210ENST00000637053 BIDP55957 195 aa2.55□□□□□ -2
VIM-210ENST00000637053 PIGPP57054 158 aa2.55□□□□□ -2
VIM-210ENST00000637053 PFN3P60673 137 aa2.55□□□□□ -2
VIM-210ENST00000637053 NCALDP61601 193 aa2.55□□□□□ -2
VIM-210ENST00000637053 RPL8P62917 257 aaKnown RBP2.55□□□□□ -2
VIM-210ENST00000637053 CFHR3Q02985 330 aa2.55□□□□□ -2
VIM-210ENST00000637053 FMODQ06828 376 aa2.55□□□□□ -2
VIM-210ENST00000637053 FAM27E3Q08E93 113 aa2.55□□□□□ -2
VIM-210ENST00000637053 PTPRJQ12913 1337 aa2.55□□□□□ -2
VIM-210ENST00000637053 UNC119Q13432 240 aa2.55□□□□□ -2
VIM-210ENST00000637053 CDK10Q15131 360 aa2.55□□□□□ -2
VIM-210ENST00000637053 TAB1Q15750 504 aa2.55□□□□□ -2
VIM-210ENST00000637053 UBE2V2Q15819 145 aa2.55□□□□□ -2
VIM-210ENST00000637053 SRSF7Q16629 238 aaKnown RBP eCLIP2.55□□□□□ -2
VIM-210ENST00000637053 LRRC26Q2I0M4 334 aa2.55□□□□□ -2
VIM-210ENST00000637053 HSD17B12Q53GQ0 312 aa2.55□□□□□ -2
VIM-210ENST00000637053 TRMT12Q53H54 448 aaKnown RBP2.55□□□□□ -2
VIM-210ENST00000637053 OCIAD2Q56VL3 154 aa2.55□□□□□ -2
VIM-210ENST00000637053 TFDP3Q5H9I0 405 aa2.55□□□□□ -2
VIM-210ENST00000637053 CLEC12AQ5QGZ9 265 aa2.55□□□□□ -2
VIM-210ENST00000637053 DCAF12Q5T6F0 453 aa2.55□□□□□ -2
VIM-210ENST00000637053 C1orf195Q5TG92 126 aa2.55□□□□□ -2
VIM-210ENST00000637053 OTUD1Q5VV17 481 aaPredicted RBP2.55□□□□□ -2
VIM-210ENST00000637053 REP15Q6BDI9 236 aa2.55□□□□□ -2
VIM-210ENST00000637053 OVOS2Q6IE36 1432 aa2.55□□□□□ -2
VIM-210ENST00000637053 KRTAP5-4Q6L8H1 288 aa2.55□□□□□ -2
VIM-210ENST00000637053 TRIM40Q6P9F5 258 aa2.55□□□□□ -2
VIM-210ENST00000637053 ZNF613Q6PF04 617 aa2.55□□□□□ -2
VIM-210ENST00000637053 SPSB3Q6PJ21 355 aa2.55□□□□□ -2
VIM-210ENST00000637053 DHRS11Q6UWP2 260 aa2.55□□□□□ -2
VIM-210ENST00000637053 C12orf54Q6X4T0 127 aa2.55□□□□□ -2
VIM-210ENST00000637053 CD109Q6YHK3 1445 aa2.55□□□□□ -2
VIM-210ENST00000637053 FGD5Q6ZNL6 1462 aa2.55□□□□□ -2
VIM-210ENST00000637053 ZNF767PQ75MW2 155 aa2.55□□□□□ -2
VIM-210ENST00000637053 HSD11B1LQ7Z5J1 315 aa2.55□□□□□ -2
VIM-210ENST00000637053 SLC47A2Q86VL8 602 aa2.55□□□□□ -2
VIM-210ENST00000637053 COMMD7Q86VX2 200 aa2.55□□□□□ -2
VIM-210ENST00000637053 MUC15Q8N387 334 aa2.55□□□□□ -2
VIM-210ENST00000637053 BPIFB2Q8N4F0 458 aa2.55□□□□□ -2
VIM-210ENST00000637053 ATPAF2Q8N5M1 289 aa2.55□□□□□ -2
VIM-210ENST00000637053 ZNF614Q8N883 585 aa2.55□□□□□ -2
VIM-210ENST00000637053 PRELID2Q8N945 189 aa2.55□□□□□ -2
VIM-210ENST00000637053 GDPD1Q8N9F7 314 aa2.55□□□□□ -2
VIM-210ENST00000637053 PNLDC1Q8NA58 520 aaKnown RBP2.55□□□□□ -2
VIM-210ENST00000637053 ZNF439Q8NDP4 499 aa2.55□□□□□ -2
VIM-210ENST00000637053 ACVR1CQ8NER5 493 aa2.55□□□□□ -2
VIM-210ENST00000637053 OR4F17Q8NGA8 305 aa2.55□□□□□ -2
VIM-210ENST00000637053 OR4D11Q8NGI4 311 aa2.55□□□□□ -2
VIM-210ENST00000637053 OR5M9Q8NGP3 310 aa2.55□□□□□ -2
VIM-210ENST00000637053 OR1L8Q8NGR8 309 aa2.55□□□□□ -2
VIM-210ENST00000637053 OR4F5Q8NH21 305 aa2.55□□□□□ -2
VIM-210ENST00000637053 ZPLD1Q8TCW7 415 aa2.55□□□□□ -2
VIM-210ENST00000637053 RNF128Q8TEB7 428 aa2.55□□□□□ -2
VIM-210ENST00000637053 AENQ8WTP8 325 aaKnown RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms