RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 PIGLQ9Y2B2 252 aa6.96□□□□□ -1.3
PNKP-226ENST00000636840 EXOSC1Q9Y3B2 195 aaKnown RBP6.96□□□□□ -1.3
PNKP-226ENST00000636840 WIPI2Q9Y4P8 454 aa6.96□□□□□ -1.3
PNKP-226ENST00000636840 HIVEP2P31629 2446 aa6.96□□□□□ -1.3
PNKP-226ENST00000636840 CELSR1Q9NYQ6 3014 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 CHD3Q12873 2000 aaKnown RBP6.95□□□□□ -1.3
PNKP-226ENST00000636840 TEP1Q99973 2627 aaKnown RBP6.95□□□□□ -1.3
PNKP-226ENST00000636840 PPIAL4EA0A075B759 164 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 IGHV4-61A0A0C4DH41 118 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 LOC100289279A0A1B0GTE1 492 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 hCG_1807616A0A1W2PRN6 198 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 TMEM210A6NLX4 147 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 DHRS7CA6NNS2 312 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 ZNF850A8MQ14 1090 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 B4DSR2 109 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 PPIAL4DF5H284 164 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 TMEM178BH3BS89 294 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 MLNRO43193 412 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 SYT7O43581 403 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 NDUFA2O43678 99 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 CD5LO43866 347 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 FAM20BO75063 409 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 DHRS3O75911 302 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 CLIC3O95833 236 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 NRASP01111 189 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 TGFAP01135 160 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 TTRP02766 147 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 CCDC159P0C7I6 412 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 UBCP0CG48 685 aaKnown RBP6.95□□□□□ -1.3
PNKP-226ENST00000636840 PPIAL4FP0DN26 164 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 CCR9P51686 369 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 PRSS12P56730 875 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 ZNF85Q03923 595 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 PRDX4Q13162 271 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 TP53I3Q53FA7 332 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 TMEM255AQ5JRV8 349 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 CLVS2Q5SYC1 327 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 ZNF684Q5T5D7 378 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 AVPI1Q5T686 147 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 FAM166AQ6J272 317 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 KCTD8Q6ZWB6 473 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 MOB3CQ70IA8 216 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 SSX6Q7RTT6 188 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 MOGAT3Q86VF5 341 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 LRRC28Q86X40 367 aaPredicted RBP6.95□□□□□ -1.3
PNKP-226ENST00000636840 CATSPERDQ86XM0 798 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 ZDHHC23Q8IYP9 409 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 STX19Q8N4C7 294 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 ZNF676Q8N7Q3 588 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 LINC01356Q8N9X3 169 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 OR5A2Q8NGI9 324 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 OR52I1Q8NGK6 324 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 ZNF671Q8TAW3 534 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 CNIH3Q8TBE1 160 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 RORBQ92753 470 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 TFAP2CQ92754 450 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 C10orf35Q96D05 121 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 TMEM80Q96HE8 168 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 C4orf36Q96KX1 117 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 ALG8Q9BVK2 526 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 COMMD4Q9H0A8 199 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 PLEKHA1Q9HB21 404 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 G6PC2Q9NQR9 355 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 YAE1D1Q9NRH1 226 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 UFSP2Q9NUQ7 469 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 KCNS2Q9ULS6 477 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 SLC7A11Q9UPY5 501 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 SLC22A13Q9Y226 551 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 CAB39Q9Y376 341 aaPredicted RBP6.95□□□□□ -1.3
PNKP-226ENST00000636840 RHBDD3Q9Y3P4 386 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 PPIAL4AQ9Y536 164 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 MTORP42345 2549 aa6.95□□□□□ -1.3
PNKP-226ENST00000636840 DYSFO75923 2080 aa6.94□□□□□ -1.3
PNKP-226ENST00000636840 LRP5LA4QPB2 252 aa6.94□□□□□ -1.3
PNKP-226ENST00000636840 C5orf63A6NC05 138 aa6.94□□□□□ -1.3
PNKP-226ENST00000636840 A8MV72 311 aaPredicted RBP6.94□□□□□ -1.3
PNKP-226ENST00000636840 J3QRE1 110 aa6.94□□□□□ -1.3
PNKP-226ENST00000636840 P2RY10O00398 339 aa6.94□□□□□ -1.3
PNKP-226ENST00000636840 LMX1BO60663 402 aa6.94□□□□□ -1.3
PNKP-226ENST00000636840 WBP4O75554 376 aaKnown RBP6.94□□□□□ -1.3
PNKP-226ENST00000636840 ATP6V1G2O95670 118 aa6.94□□□□□ -1.3
PNKP-226ENST00000636840 PNPP00491 289 aa6.94□□□□□ -1.3
PNKP-226ENST00000636840 IGHA1P01876 353 aa6.94□□□□□ -1.3
PNKP-226ENST00000636840 OCM2P0CE71 109 aa6.94□□□□□ -1.3
PNKP-226ENST00000636840 OCMP0CE72 109 aaPredicted RBP6.94□□□□□ -1.3
PNKP-226ENST00000636840 PSMB10P40306 273 aa6.94□□□□□ -1.3
PNKP-226ENST00000636840 VHLP40337 213 aa6.94□□□□□ -1.3
PNKP-226ENST00000636840 MDH2P40926 338 aaKnown RBP6.94□□□□□ -1.3
PNKP-226ENST00000636840 OR12D2P58182 307 aa6.94□□□□□ -1.3
PNKP-226ENST00000636840 BTG1P62324 171 aa6.94□□□□□ -1.3
PNKP-226ENST00000636840 GNG3P63215 75 aa6.94□□□□□ -1.3
PNKP-226ENST00000636840 ST3GAL4Q11206 333 aa6.94□□□□□ -1.3
PNKP-226ENST00000636840 MAB21L1Q13394 359 aa6.94□□□□□ -1.3
PNKP-226ENST00000636840 ALKBH1Q13686 389 aaKnown RBP6.94□□□□□ -1.3
PNKP-226ENST00000636840 ODF4Q2M2E3 257 aa6.94□□□□□ -1.3
PNKP-226ENST00000636840 CEACAM21Q3KPI0 293 aa6.94□□□□□ -1.3
PNKP-226ENST00000636840 TMEM155Q4W5P6 130 aa6.94□□□□□ -1.3
PNKP-226ENST00000636840 FDX2Q6P4F2 183 aa6.94□□□□□ -1.3
PNKP-226ENST00000636840 RFLNBQ8N5W9 214 aa6.94□□□□□ -1.3
PNKP-226ENST00000636840 BPIFB6Q8NFQ5 453 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms