RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 PTGES3LE9PB15 166 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 WNT9BO14905 357 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 CST4P01036 141 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 SMIM18P0DKX4 95 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 RBMXP38159 391 aaKnown RBP8.21□□□□□ -1.09
LINC00339-210ENST00000635675 PMELP40967 661 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 CD200P41217 278 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 OR12D2P58182 307 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 SLC3A1Q07837 685 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 GALEQ14376 348 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 OR8G1Q15617 311 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 TMEM249Q2WGJ8 235 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 BCL2L15Q5TBC7 163 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 FDX2Q6P4F2 183 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 CLEC9AQ6UXN8 241 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 Q6ZSR3 168 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 LHFPL3Q86UP9 236 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 CATSPERDQ86XM0 798 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 SPERTQ8NA61 448 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 ADAT1Q9BUB4 502 aaKnown RBP8.21□□□□□ -1.09
LINC00339-210ENST00000635675 JAM3Q9BX67 310 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 CCDC90BQ9GZT6 254 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 PPP1R3EQ9H7J1 279 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 FGF20Q9NP95 211 aaPredicted RBP8.21□□□□□ -1.09
LINC00339-210ENST00000635675 GPR84Q9NQS5 396 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 INPP5EQ9NRR6 644 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 ACOXLQ9NUZ1 547 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 ERVK13-1Q9NX77 482 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 SCOCQ9UIL1 159 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 GNG8Q9UK08 70 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 SLC22A13Q9Y226 551 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 WIPI2Q9Y4P8 454 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 CLDN25C9JDP6 229 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 IFNL4K9M1U5 179 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 DHRS3O75911 302 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 HEXAP06865 529 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 LIMS3P0CW19 117 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 LIMS4P0CW20 117 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 DCKP27707 260 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 IL2RGP31785 369 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 PSMB10P40306 273 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 MAP2K3P46734 347 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 ACTA2P62736 377 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 ACTG2P63267 376 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 MVKQ03426 396 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 MPPED2Q15777 294 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 ZNF181Q2M3W8 571 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 RBM48Q5RL73 367 aaKnown RBP8.2□□□□□ -1.1
LINC00339-210ENST00000635675 AVPI1Q5T686 147 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 AHSA2Q719I0 299 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 FAM220AQ7Z4H9 259 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 MOGAT3Q86VF5 341 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 SYS1Q8N2H4 156 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 PRSS35Q8N3Z0 413 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 FTMTQ8N4E7 242 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 HPS1Q92902 700 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 RAB1CQ92928 201 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 DVL3Q92997 716 aaPredicted RBP8.2□□□□□ -1.1
LINC00339-210ENST00000635675 ERGIC1Q969X5 290 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 PELI1Q96FA3 418 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 TIMD4Q96H15 378 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 FAM71F1Q96KD3 344 aaPredicted RBP8.2□□□□□ -1.1
LINC00339-210ENST00000635675 C4orf36Q96KX1 117 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 ALG8Q9BVK2 526 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 PAPOLGQ9BWT3 736 aaKnown RBP8.2□□□□□ -1.1
LINC00339-210ENST00000635675 ZNF696Q9H7X3 374 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 PLCXD1Q9NUJ7 323 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 SCN3BQ9NY72 215 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 ERVK-18Q9QC07 812 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 GTF2A1LQ9UNN4 478 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 MPC1Q9Y5U8 109 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.2□□□□□ -1.1
LINC00339-210ENST00000635675 ZNF816-ZNF321PA0A0X1KG74 233 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 ZNF850A8MQ14 1090 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 TMEM178BH3BS89 294 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 J3QLW9 94 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 P2RY10O00398 339 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 MTRF1O75570 445 aaKnown RBP8.2□□□□□ -1.1
LINC00339-210ENST00000635675 IGHV4-31P0DP07 118 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 ZNF19P17023 458 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 CCL1P22362 96 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 GNALP38405 381 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 KIR3DL2P43630 455 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 NANOS3P60323 173 aaKnown RBP8.2□□□□□ -1.1
LINC00339-210ENST00000635675 LMO4P61968 165 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 MZT1Q08AG7 82 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 RIPPLY1Q0D2K3 151 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 PRDX4Q13162 271 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 WDR38Q5JTN6 314 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 ZBTB37Q5TC79 503 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 PRAMEF6Q5VXH4 476 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 Q71RC1 249 aaPredicted RBP8.2□□□□□ -1.1
LINC00339-210ENST00000635675 WDR86Q86TI4 376 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 COMMD2Q86X83 199 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 SEMA6DQ8NFY4 1073 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 TSPAN14Q8NG11 270 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 OR14K1Q8NGZ2 314 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 OR2G2Q8NGZ5 317 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 OR8S1Q8NH09 359 aa8.2□□□□□ -1.1
LINC00339-210ENST00000635675 CLDND2Q8NHS1 167 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms