RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 WNT2P09544 360 aa13.16□□□□□ -0.3
LINC00339-207ENST00000634712 OR2T7P0C7T2 308 aa13.16□□□□□ -0.3
LINC00339-207ENST00000634712 ZFP36P26651 326 aaKnown RBP13.16□□□□□ -0.3
LINC00339-207ENST00000634712 EGR3Q06889 387 aa13.16□□□□□ -0.3
LINC00339-207ENST00000634712 OR8B8Q15620 311 aa13.16□□□□□ -0.3
LINC00339-207ENST00000634712 ZNF404Q494X3 552 aa13.16□□□□□ -0.3
LINC00339-207ENST00000634712 THAP5Q7Z6K1 395 aa13.16□□□□□ -0.3
LINC00339-207ENST00000634712 PQLC1Q8N2U9 271 aa13.16□□□□□ -0.3
LINC00339-207ENST00000634712 OR8B3Q8NGG8 313 aa13.16□□□□□ -0.3
LINC00339-207ENST00000634712 OR2T27Q8NH04 317 aa13.16□□□□□ -0.3
LINC00339-207ENST00000634712 EME1Q96AY2 570 aa13.16□□□□□ -0.3
LINC00339-207ENST00000634712 NEIL1Q96FI4 390 aaPredicted RBP13.16□□□□□ -0.3
LINC00339-207ENST00000634712 HRASLS5Q96KN8 279 aa13.16□□□□□ -0.3
LINC00339-207ENST00000634712 LYZL4Q96KX0 146 aa13.16□□□□□ -0.3
LINC00339-207ENST00000634712 OR8B2Q96RD0 313 aa13.16□□□□□ -0.3
LINC00339-207ENST00000634712 RTL8AQ9BWD3 113 aa13.16□□□□□ -0.3
LINC00339-207ENST00000634712 C7orf69Q9H7B7 122 aa13.16□□□□□ -0.3
LINC00339-207ENST00000634712 METTL17Q9H7H0 456 aaPredicted RBP13.16□□□□□ -0.3
LINC00339-207ENST00000634712 TRIM36Q9NQ86 728 aa13.16□□□□□ -0.3
LINC00339-207ENST00000634712 OR5V1Q9UGF6 321 aa13.16□□□□□ -0.3
LINC00339-207ENST00000634712 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.16□□□□□ -0.3
LINC00339-207ENST00000634712 LRCH1Q9Y2L9 728 aa13.16□□□□□ -0.3
LINC00339-207ENST00000634712 WNK2Q9Y3S1 2297 aa13.15□□□□□ -0.3
LINC00339-207ENST00000634712 SNTNA6NMZ2 147 aa13.15□□□□□ -0.3
LINC00339-207ENST00000634712 ZNF850A8MQ14 1090 aa13.15□□□□□ -0.3
LINC00339-207ENST00000634712 F5H0A9 414 aaPredicted RBP13.15□□□□□ -0.3
LINC00339-207ENST00000634712 LOC110117498-PIK3R3F6TDL0 507 aa13.15□□□□□ -0.3
LINC00339-207ENST00000634712 CST4P01036 141 aa13.15□□□□□ -0.3
LINC00339-207ENST00000634712 KRT8P05787 483 aa13.15□□□□□ -0.3
LINC00339-207ENST00000634712 GNB2P62879 340 aa13.15□□□□□ -0.3
LINC00339-207ENST00000634712 PRDX4Q13162 271 aa13.15□□□□□ -0.3
LINC00339-207ENST00000634712 SFRP4Q6FHJ7 346 aaPredicted RBP13.15□□□□□ -0.3
LINC00339-207ENST00000634712 DCDC5Q6ZRR9 648 aa13.15□□□□□ -0.3
LINC00339-207ENST00000634712 KCTD8Q6ZWB6 473 aa13.15□□□□□ -0.3
LINC00339-207ENST00000634712 RFLNBQ8N5W9 214 aa13.15□□□□□ -0.3
LINC00339-207ENST00000634712 YIPF7Q8N8F6 280 aa13.15□□□□□ -0.3
LINC00339-207ENST00000634712 C19orf18Q8NEA5 215 aa13.15□□□□□ -0.3
LINC00339-207ENST00000634712 OR1M1Q8NGA1 313 aa13.15□□□□□ -0.3
LINC00339-207ENST00000634712 OR10H4Q8NGA5 316 aa13.15□□□□□ -0.3
LINC00339-207ENST00000634712 OR51E1Q8TCB6 317 aa13.15□□□□□ -0.3
LINC00339-207ENST00000634712 ITFG2Q969R8 447 aa13.15□□□□□ -0.3
LINC00339-207ENST00000634712 SSBP3Q9BWW4 388 aaPredicted RBP13.15□□□□□ -0.3
LINC00339-207ENST00000634712 MOB1AQ9H8S9 216 aa13.15□□□□□ -0.3
LINC00339-207ENST00000634712 GMPPBQ9Y5P6 360 aa13.15□□□□□ -0.3
LINC00339-207ENST00000634712 TRAV38-1A0A0B4J264 116 aa13.14□□□□□ -0.31
LINC00339-207ENST00000634712 PPIAL4CA0A0B4J2A2 164 aa13.14□□□□□ -0.31
LINC00339-207ENST00000634712 PRR32B1ATL7 298 aa13.14□□□□□ -0.31
LINC00339-207ENST00000634712 C3orf80F5H4A9 247 aa13.14□□□□□ -0.31
LINC00339-207ENST00000634712 LGALS8O00214 317 aa13.14□□□□□ -0.31
LINC00339-207ENST00000634712 MAGEB4O15481 346 aaPredicted RBP13.14□□□□□ -0.31
LINC00339-207ENST00000634712 PHF1O43189 567 aaPredicted RBP13.14□□□□□ -0.31
LINC00339-207ENST00000634712 MTRF1O75570 445 aaKnown RBP13.14□□□□□ -0.31
LINC00339-207ENST00000634712 RPP14O95059 124 aaKnown RBP13.14□□□□□ -0.31
LINC00339-207ENST00000634712 APOL3O95236 402 aa13.14□□□□□ -0.31
LINC00339-207ENST00000634712 ATP6V1B1P15313 513 aa13.14□□□□□ -0.31
LINC00339-207ENST00000634712 ACKR3P25106 362 aa13.14□□□□□ -0.31
LINC00339-207ENST00000634712 SEC61A1P61619 476 aaKnown RBP13.14□□□□□ -0.31
LINC00339-207ENST00000634712 RIPPLY1Q0D2K3 151 aa13.14□□□□□ -0.31
LINC00339-207ENST00000634712 BCL2L15Q5TBC7 163 aa13.14□□□□□ -0.31
LINC00339-207ENST00000634712 MEDAGQ5VYS4 303 aa13.14□□□□□ -0.31
LINC00339-207ENST00000634712 ZNF826PQ6ZT77 177 aa13.14□□□□□ -0.31
LINC00339-207ENST00000634712 ZDHHC23Q8IYP9 409 aa13.14□□□□□ -0.31
LINC00339-207ENST00000634712 GALNT4Q8N4A0 578 aa13.14□□□□□ -0.31
LINC00339-207ENST00000634712 SEMA6DQ8NFY4 1073 aa13.14□□□□□ -0.31
LINC00339-207ENST00000634712 NANPQ8TBE9 248 aa13.14□□□□□ -0.31
LINC00339-207ENST00000634712 UBE2FQ969M7 185 aa13.14□□□□□ -0.31
LINC00339-207ENST00000634712 RNF170Q96K19 258 aa13.14□□□□□ -0.31
LINC00339-207ENST00000634712 FAM71F1Q96KD3 344 aaPredicted RBP13.14□□□□□ -0.31
LINC00339-207ENST00000634712 TMPRSS13Q9BYE2 586 aa13.14□□□□□ -0.31
LINC00339-207ENST00000634712 OCEL1Q9H607 264 aa13.14□□□□□ -0.31
LINC00339-207ENST00000634712 GPR84Q9NQS5 396 aa13.14□□□□□ -0.31
LINC00339-207ENST00000634712 NUFIP1Q9UHK0 495 aaKnown RBP13.14□□□□□ -0.31
LINC00339-207ENST00000634712 SNX5Q9Y5X3 404 aa13.14□□□□□ -0.31
LINC00339-207ENST00000634712 R4GMQ9 66 aa13.14□□□□□ -0.31
LINC00339-207ENST00000634712 ARHGAP32A7KAX9 2087 aa13.13□□□□□ -0.31
LINC00339-207ENST00000634712 LOC105371242A0A075B767 164 aa13.13□□□□□ -0.31
LINC00339-207ENST00000634712 ZNF816-ZNF321PA0A0X1KG74 233 aa13.13□□□□□ -0.31
LINC00339-207ENST00000634712 A0A1W2PQL4 384 aaPredicted RBP13.13□□□□□ -0.31
LINC00339-207ENST00000634712 OOEPA6NGQ2 149 aa13.13□□□□□ -0.31
LINC00339-207ENST00000634712 METTL15A6NJ78 407 aa13.13□□□□□ -0.31
LINC00339-207ENST00000634712 NDUFA2O43678 99 aa13.13□□□□□ -0.31
LINC00339-207ENST00000634712 CD80P33681 288 aa13.13□□□□□ -0.31
LINC00339-207ENST00000634712 MTNR1AP48039 350 aa13.13□□□□□ -0.31
LINC00339-207ENST00000634712 PITPNBP48739 271 aa13.13□□□□□ -0.31
LINC00339-207ENST00000634712 SNRPGP62308 76 aaKnown RBP13.13□□□□□ -0.31
LINC00339-207ENST00000634712 MFGE8Q08431 387 aaPredicted RBP13.13□□□□□ -0.31
LINC00339-207ENST00000634712 LIPNQ5VXI9 398 aa13.13□□□□□ -0.31
LINC00339-207ENST00000634712 PLEKHG7Q6ZR37 379 aa13.13□□□□□ -0.31
LINC00339-207ENST00000634712 TMEM158Q8WZ71 300 aa13.13□□□□□ -0.31
LINC00339-207ENST00000634712 PPP1R14AQ96A00 147 aa13.13□□□□□ -0.31
LINC00339-207ENST00000634712 ITPKCQ96DU7 683 aa13.13□□□□□ -0.31
LINC00339-207ENST00000634712 SLC29A1Q99808 456 aa13.13□□□□□ -0.31
LINC00339-207ENST00000634712 MRI1Q9BV20 369 aa13.13□□□□□ -0.31
LINC00339-207ENST00000634712 PPP1R3EQ9H7J1 279 aa13.13□□□□□ -0.31
LINC00339-207ENST00000634712 RNPEPL1Q9HAU8 725 aa13.13□□□□□ -0.31
LINC00339-207ENST00000634712 CLN8Q9UBY8 286 aa13.13□□□□□ -0.31
LINC00339-207ENST00000634712 MRM2Q9UI43 246 aaKnown RBP13.13□□□□□ -0.31
LINC00339-207ENST00000634712 OR52A1Q9UKL2 312 aa13.13□□□□□ -0.31
LINC00339-207ENST00000634712 POLR3KQ9Y2Y1 108 aaPredicted RBP13.13□□□□□ -0.31
LINC00339-207ENST00000634712 TMEM210A6NLX4 147 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms