RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 PFN4Q8NHR9 129 aa6.69□□□□□ -1.34
TRIM49B-202ENST00000622138 SUSD6Q92537 303 aa6.69□□□□□ -1.34
TRIM49B-202ENST00000622138 HAS2Q92819 552 aa6.69□□□□□ -1.34
TRIM49B-202ENST00000622138 MIEN1Q9BRT3 115 aa6.69□□□□□ -1.34
TRIM49B-202ENST00000622138 WWTR1Q9GZV5 400 aa6.69□□□□□ -1.34
TRIM49B-202ENST00000622138 CSTL1Q9H114 145 aa6.69□□□□□ -1.34
TRIM49B-202ENST00000622138 ARV1Q9H2C2 271 aa6.69□□□□□ -1.34
TRIM49B-202ENST00000622138 PRSS16Q9NQE7 514 aa6.69□□□□□ -1.34
TRIM49B-202ENST00000622138 C20orf141Q9NUB4 165 aa6.69□□□□□ -1.34
TRIM49B-202ENST00000622138 AURKAIP1Q9NWT8 199 aaPredicted RBP6.69□□□□□ -1.34
TRIM49B-202ENST00000622138 PLA2G2EQ9NZK7 142 aa6.69□□□□□ -1.34
TRIM49B-202ENST00000622138 OR5AC2Q9NZP5 309 aa6.69□□□□□ -1.34
TRIM49B-202ENST00000622138 FOXD3Q9UJU5 478 aaPredicted RBP6.69□□□□□ -1.34
TRIM49B-202ENST00000622138 SLC13A4Q9UKG4 626 aa6.69□□□□□ -1.34
TRIM49B-202ENST00000622138 SLC7A7Q9UM01 511 aa6.69□□□□□ -1.34
TRIM49B-202ENST00000622138 ZNF443Q9Y2A4 671 aaPredicted RBP6.69□□□□□ -1.34
TRIM49B-202ENST00000622138 MRPS23Q9Y3D9 190 aaKnown RBP6.69□□□□□ -1.34
TRIM49B-202ENST00000622138 TRAV39A0A0B4J263 110 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 MEIS3P1A6NDR6 274 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 ZNF727A8MUV8 499 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 A8MVM7 634 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 M0QYG6 137 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 CYR61O00622 381 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 PEX12O00623 359 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 NME2P1O60361 137 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 DOK2O60496 412 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 TOMM40O96008 361 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 PNPP00491 289 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 CSNK2A2P19784 350 aaPredicted RBP6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 MAKP20794 623 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 DTYMKP23919 212 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 TEAD1P28347 426 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 WASP42768 502 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 NOVA1P51513 510 aaKnown RBP6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 POLR2HP52434 150 aaKnown RBP6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 ZNF136P52737 540 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 SLC16A1P53985 500 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 TGM3Q08188 693 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 ZNF616Q08AN1 781 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 CRMP1Q14194 572 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 Q499Y3 187 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 PHF19Q5T6S3 580 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 C1orf185Q5T7R7 199 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 AGBL4Q5VU57 503 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 KDM8Q8N371 416 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 C12orf76Q8N812 135 aaPredicted RBP6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 STT3BQ8TCJ2 826 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 DNASE2BQ8WZ79 361 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 TECTBQ96PL2 329 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 PDCD1LG2Q9BQ51 273 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 PRSS27Q9BQR3 290 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 CXXC1Q9P0U4 656 aaPredicted RBP6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 PADI1Q9ULC6 663 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 COLEC10Q9Y6Z7 277 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 REV3LO60673 3130 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 SCN2AQ99250 2005 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 A0A0A6YYH2 397 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 NPIPA5A0A0B4J1W7 369 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 C13orf42A0A1B0GVH6 325 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 A6NJ64 397 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 FTCDNL1E5RQL4 147 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 NPIPA7E9PJI5 369 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 SCAF4O95104 1147 aaKnown RBP6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 LYPD3O95274 346 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 IFNA21P01568 189 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 NPIPA8P0DM63 369 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 IL9P15248 144 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 CD46P15529 392 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 ADRA2CP18825 462 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 NAA10P41227 235 aaPredicted RBP6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 TSFMP43897 325 aaKnown RBP6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 MMP16P51512 607 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 RPS20P60866 119 aaKnown RBP6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 ADAM8P78325 824 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 PRDX4Q13162 271 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 AADACL3Q5VUY0 350 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 MFSD12Q6NUT3 480 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 THSD4Q6ZMP0 1018 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 OR4N5Q8IXE1 308 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 ZNF100Q8IYN0 542 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 RFLNBQ8N5W9 214 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 ZNF563Q8TA94 476 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 THRSPQ92748 146 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 TMEM106AQ96A25 262 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 NUDT11Q96G61 164 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 SLC35E1Q96K37 410 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 TP53RKQ96S44 253 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 HDAC8Q9BY41 377 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 DEC1Q9P2X7 70 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 MEMO1Q9Y316 297 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 CLDN16Q9Y5I7 305 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 URGCP-MRPS24S4R325 110 aa6.68□□□□□ -1.34
TRIM49B-202ENST00000622138 DNAH14Q0VDD8 3507 aa6.67□□□□□ -1.34
TRIM49B-202ENST00000622138 TRBV5-5A0A0J9YX44 114 aa6.67□□□□□ -1.34
TRIM49B-202ENST00000622138 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.67□□□□□ -1.34
TRIM49B-202ENST00000622138 CBY3A6NI87 242 aa6.67□□□□□ -1.34
TRIM49B-202ENST00000622138 CCL25O15444 150 aa6.67□□□□□ -1.34
TRIM49B-202ENST00000622138 TNFSF13O75888 250 aa6.67□□□□□ -1.34
TRIM49B-202ENST00000622138 RCBTB2O95199 551 aa6.67□□□□□ -1.34
TRIM49B-202ENST00000622138 HPRT1P00492 218 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms