RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 CTRB2Q6GPI1 263 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 SVBPQ8N300 66 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 GPX8Q8TED1 209 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 RAB1CQ92928 201 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 ITPKCQ96DU7 683 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 PSENENQ9NZ42 101 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 CSAG2Q9Y5P2 127 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 A0A0B4J203 849 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 SMLR1H3BR10 107 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 PTBP1P26599 531 aaKnown RBP eCLIP10.19□□□□□ -0.78
CLIP1-219ENST00000620786 NPEPL1Q8NDH3 523 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 OTOSQ8NHW6 89 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 PTDSS2Q9BVG9 487 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 CFHR5Q9BXR6 569 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 FAM60AQ9NP50 221 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 FER1L6Q2WGJ9 1857 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 THSD7AQ9UPZ6 1657 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 ZNF785A8K8V0 405 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 TXNL1O43396 289 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 ISL1P61371 349 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 DGCR2P98153 550 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 OR2T6Q8NHC8 308 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 EXTL1Q92935 676 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 POM121L2Q96KW2 1035 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 DOK1Q99704 481 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 MED9Q9NWA0 146 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 FBXO34Q9NWN3 711 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 AMMECR1Q9Y4X0 333 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-219ENST00000620786 M0R1X1 148 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 SBK3P0C264 359 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 ZNF32P17041 273 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 CLPPQ16740 277 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-219ENST00000620786 OR10K2Q6IF99 312 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 DRAM2Q6UX65 266 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 BHLHA9Q7RTU4 235 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 MITD1Q8WV92 249 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 LAMP3Q9UQV4 416 aa10.19□□□□□ -0.78
CLIP1-219ENST00000620786 TUBAL3A6NHL2 446 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 HNF1AP20823 631 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 BAMBIQ13145 260 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 TIGD3Q6B0B8 471 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 TMEM65Q6PI78 240 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 ERGIC1Q969X5 290 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 CLDN23Q96B33 292 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 CIB3Q96Q77 187 aaPredicted RBP10.18□□□□□ -0.78
CLIP1-219ENST00000620786 TEX51A0A1B0GUA7 166 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 DEFB108AA8MXU0 73 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 CCL21O00585 134 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 OR7C2O60412 319 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 RBP4P02753 201 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 ACOT6Q3I5F7 207 aaPredicted RBP10.18□□□□□ -0.78
CLIP1-219ENST00000620786 PP6455Q8WZ26 134 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 UGT2A1Q9Y4X1 527 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 H3BMH7 237 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 GPANK1O95872 356 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 SLC25A6P12236 298 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 OR3A4PP47883 348 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 TLE1Q04724 770 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 ZNF683Q8IZ20 524 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 SLC38A6Q8IZM9 456 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 YIPF5Q969M3 257 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 ADAM19Q9H013 955 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 SIAEQ9HAT2 523 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 AK3Q9UIJ7 227 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 LRP3O75074 770 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 METTL15P1P0C7V9 234 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 PI3P19957 117 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 PIGPP57054 158 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 RELAQ04206 551 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 RTP5Q14D33 572 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 TOMM34Q15785 309 aaPredicted RBP10.18□□□□□ -0.78
CLIP1-219ENST00000620786 CELF2-AS1Q8N7Q2 184 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 ORAI1Q96D31 301 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 ACY3Q96HD9 319 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 CDCA4Q9BXL8 241 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 PARP12Q9H0J9 701 aaKnown RBP10.18□□□□□ -0.78
CLIP1-219ENST00000620786 GAL3ST2Q9H3Q3 398 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 PATZ1Q9HBE1 687 aaKnown RBP10.18□□□□□ -0.78
CLIP1-219ENST00000620786 NPAP1Q9NZP6 1156 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 FOXJ3Q9UPW0 622 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 C20orf202A1L168 122 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 IFITM5A6NNB3 132 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 PRRX1P54821 245 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 P2RX3P56373 397 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 BAGE3Q86Y29 109 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 BAGE2Q86Y30 109 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 ZNF547Q8IVP9 402 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 D2HGDHQ8N465 521 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 PXT1Q8NFP0 134 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 NIPSNAP3BQ9BS92 247 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 CXXC4Q9H2H0 198 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 ZNF835Q9Y2P0 537 aa10.18□□□□□ -0.78
CLIP1-219ENST00000620786 AQP7P3A6NL99 342 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 RER1O15258 196 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 ATXN7O15265 892 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-219ENST00000620786 SCGB1D1O95968 90 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 NGFP01138 241 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 KIR2DL1P43626 348 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-219ENST00000620786 PDCD1Q15116 288 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 SOHLH1Q5JUK2 328 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms