RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 C4orf33Q8N1A6 199 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 LYG1Q8N1E2 194 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 ZNF561Q8N587 486 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 CSNK2A3Q8NEV1 391 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 OR8U1Q8NH10 309 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 PFN4Q8NHR9 129 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 SPRYD4Q8WW59 207 aaPredicted RBP3.64□□□□□ -1.83
SNCA-213ENST00000618500 MAL2Q969L2 176 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 SPTSSAQ969W0 71 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 VPS33AQ96AX1 596 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 RHOVQ96L33 236 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 PRRC1Q96M27 445 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 RBM14Q96PK6 669 aaKnown RBP3.64□□□□□ -1.83
SNCA-213ENST00000618500 ATF6BQ99941 703 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 CHCHD6Q9BRQ6 235 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 NMNAT1Q9HAN9 279 aaPredicted RBP3.64□□□□□ -1.83
SNCA-213ENST00000618500 EMC7Q9NPA0 242 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 SIRT7Q9NRC8 400 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 ABCB10Q9NRK6 738 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 NOS1APO75052 506 aaPredicted RBP3.64□□□□□ -1.83
SNCA-213ENST00000618500 MTRF1O75570 445 aaKnown RBP3.64□□□□□ -1.83
SNCA-213ENST00000618500 MYF6P23409 242 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 CD34P28906 385 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 DCTDP32321 178 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 KRT72Q14CN4 511 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 TNFAIP8L3Q5GJ75 292 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 TEX30Q5JUR7 227 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 ZBTB37Q5TC79 503 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 TMEM65Q6PI78 240 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 CFAP77Q6ZQR2 320 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 DPY19L4Q7Z388 723 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 LRRC29Q8WV35 223 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 ZNF570Q96NI8 536 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 CCL13Q99616 98 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 MYLK2Q9H1R3 596 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 NRIP3Q9NQ35 241 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 CYB5R1Q9UHQ9 305 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 BAG5Q9UL15 447 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 NUP214P35658 2090 aaPredicted RBP3.64□□□□□ -1.83
SNCA-213ENST00000618500 SERPINI2O75830 405 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 ZNF205O95201 554 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 CHRM2P08172 466 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 HOXD3P31249 432 aaPredicted RBP3.63□□□□□ -1.83
SNCA-213ENST00000618500 MEF2CQ06413 473 aaPredicted RBP3.63□□□□□ -1.83
SNCA-213ENST00000618500 LY6EQ16553 131 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 DGUOKQ16854 277 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 CEP85LQ5SZL2 805 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 SFRP4Q6FHJ7 346 aaPredicted RBP3.63□□□□□ -1.83
SNCA-213ENST00000618500 LCN8Q6JVE9 175 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 MAVSQ7Z434 540 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 MKXQ8IYA7 352 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 PNKDQ8N490 385 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 FAM216BQ8N7L0 139 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 MYOZ3Q8TDC0 251 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 CHPT1Q8WUD6 406 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 C17orf50Q8WW18 174 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 BPIFA2Q96DR5 249 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 DUS3LQ96G46 650 aaKnown RBP3.63□□□□□ -1.83
SNCA-213ENST00000618500 CCDC28BQ9BUN5 200 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 CHID1Q9BWS9 393 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 C19orf73Q9NVV2 129 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 SCOCQ9UIL1 159 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 RIMS3Q9UJD0 308 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 SMAD5-AS1Q9Y6J3 95 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 PCLOQ9Y6V0 5065 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 TLDC2A0PJX2 215 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 ANKRD30BLA7E2S9 258 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 EVPLLA8MZ36 301 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 XKRYO14609 159 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 IDH3BO43837 385 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 PTP4A3O75365 173 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 PEX14O75381 377 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 CTLA4P16410 223 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 CA6P23280 308 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 ARHGDIBP52566 201 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 ST3GAL3Q11203 375 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 IL18R1Q13478 541 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 KRR1Q13601 381 aaKnown RBP3.63□□□□□ -1.83
SNCA-213ENST00000618500 DUSP7Q16829 419 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 DMRTC1Q5HYR2 192 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 GLYATL3Q5SZD4 288 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 DPY19L2P2Q6ZN68 376 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 TSEN54Q7Z6J9 526 aaKnown RBP3.63□□□□□ -1.83
SNCA-213ENST00000618500 TMEM255BQ8WV15 326 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 RORBQ92753 470 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 TAMM41Q96BW9 452 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 PKNOX2Q96KN3 472 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 RTL8AQ9BWD3 113 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 C20orf27Q9GZN8 174 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 SLAMF8Q9P0V8 285 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 NLKQ9UBE8 527 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 GRHPRQ9UBQ7 328 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 DNAJB9Q9UBS3 223 aa3.63□□□□□ -1.83
SNCA-213ENST00000618500 hCG_38984A0A1B0GV85 526 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 FAM90A18PA6NE21 464 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 FAM90A16PA6NEW6 464 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 FAM90A20PA6NIJ5 464 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 FAM90A9PA6NNJ1 464 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 FAM90A12PA8MX19 464 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 FAM90A5PA8MXJ8 464 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms