RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 FSTP19883 344 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 VEGFCP49767 419 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 PITPNAQ00169 270 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 PMPCAQ10713 525 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 SNTB2Q13425 540 aaKnown RBP6.78□□□□□ -1.32
NEK3-207ENST00000617054 ZNF169Q14929 603 aaPredicted RBP6.78□□□□□ -1.32
NEK3-207ENST00000617054 RAB35Q15286 201 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 SLC22A6Q4U2R8 563 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 OLFML2AQ68BL7 652 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 ANKRD16Q6P6B7 361 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 VWA1Q6PCB0 445 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 GLIPR1L1Q6UWM5 242 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 DOK3Q7L591 496 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 MYPOPQ86VE0 399 aaPredicted RBP6.78□□□□□ -1.32
NEK3-207ENST00000617054 LYPD6Q86Y78 171 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 BHLHE23Q8NDY6 225 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 FCAMRQ8WWV6 532 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 TMEM45BQ96B21 275 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 ELL3Q9HB65 397 aaPredicted RBP6.78□□□□□ -1.32
NEK3-207ENST00000617054 NUDT15Q9NV35 164 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 CRIM1Q9NZV1 1036 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 CADP27708 2225 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 FAM230AA0A1W2PPH8 454 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 TMEM235A6NFC5 223 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 XRCC3O43542 346 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 EDN3P14138 238 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 CTSSP25774 331 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 SCRN3Q0VDG4 424 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 RNPS1Q15287 305 aaKnown RBP6.77□□□□□ -1.33
NEK3-207ENST00000617054 BCL2A1Q16548 175 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 TATDN3Q17R31 274 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 RBMXL3Q8N7X1 1067 aaKnown RBP6.77□□□□□ -1.33
NEK3-207ENST00000617054 C9orf106Q8NAJ2 232 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 CHST4Q8NCG5 386 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 SMIM4Q8WVI0 70 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 SORCS2Q96PQ0 1159 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 RNF122Q9H9V4 155 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 B3GNT2Q9NY97 397 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 OR6C6A6NF89 314 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 ANGPTL7O43827 346 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 DHRS3O75911 302 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 CELA3BP08861 270 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 FCGR2AP12318 317 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 GNB3P16520 340 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 PTBP1P26599 531 aaKnown RBP eCLIP6.77□□□□□ -1.338e-14■■■□□ 15
NEK3-207ENST00000617054 RBMXP38159 391 aaKnown RBP6.77□□□□□ -1.33
NEK3-207ENST00000617054 SPATA46Q5T0L3 261 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 MZT2BQ6NZ67 158 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 CRIP3Q6Q6R5 217 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 ZNF584Q8IVC4 421 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 SPACA3Q8IXA5 215 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 OR6M1Q8NGM8 313 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 RAB40AQ8WXH6 277 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 MOB1AQ9H8S9 216 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 ZNF581Q9P0T4 197 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 ROS1P08922 2347 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 IGHV3-64DA0A0J9YX35 117 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 SPRY1O43609 319 aaPredicted RBP6.77□□□□□ -1.33
NEK3-207ENST00000617054 CEACAM4O75871 244 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 ALDOBP05062 364 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 IL32P24001 234 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 SLC6A1P30531 599 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 EIF2B2P49770 351 aaKnown RBP6.77□□□□□ -1.33
NEK3-207ENST00000617054 KLF9Q13886 244 aaPredicted RBP6.77□□□□□ -1.33
NEK3-207ENST00000617054 PDCD1Q15116 288 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 KISS1Q15726 138 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 NINJ1Q92982 152 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 CACNG6Q9BXT2 260 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 OR10A2Q9H208 303 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 DIABLOQ9NR28 239 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 ING4Q9UNL4 249 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 ETV7Q9Y603 341 aa6.77□□□□□ -1.33
NEK3-207ENST00000617054 ZNF724A8MTY0 619 aa6.76□□□□□ -1.33
NEK3-207ENST00000617054 MPIG6BO95866 241 aa6.76□□□□□ -1.33
NEK3-207ENST00000617054 CSN2P05814 226 aa6.76□□□□□ -1.33
NEK3-207ENST00000617054 STOMP27105 288 aa6.76□□□□□ -1.33
NEK3-207ENST00000617054 PCGF3Q3KNV8 242 aa6.76□□□□□ -1.33
NEK3-207ENST00000617054 FBXW9Q5XUX1 488 aa6.76□□□□□ -1.33
NEK3-207ENST00000617054 REC114Q7Z4M0 266 aa6.76□□□□□ -1.33
NEK3-207ENST00000617054 ADGRE4PQ86SQ3 457 aa6.76□□□□□ -1.33
NEK3-207ENST00000617054 GVQW1Q8N7I0 195 aa6.76□□□□□ -1.33
NEK3-207ENST00000617054 OR4S1Q8NGB4 309 aa6.76□□□□□ -1.33
NEK3-207ENST00000617054 PIGCQ92535 297 aa6.76□□□□□ -1.33
NEK3-207ENST00000617054 CCDC120Q96HB5 630 aa6.76□□□□□ -1.33
NEK3-207ENST00000617054 SELENOIQ9C0D9 397 aa6.76□□□□□ -1.33
NEK3-207ENST00000617054 POFUT1Q9H488 388 aa6.76□□□□□ -1.33
NEK3-207ENST00000617054 METTL17Q9H7H0 456 aaPredicted RBP6.76□□□□□ -1.33
NEK3-207ENST00000617054 HRASLSQ9HDD0 168 aa6.76□□□□□ -1.33
NEK3-207ENST00000617054 MRPS28Q9Y2Q9 187 aaKnown RBP6.76□□□□□ -1.33
NEK3-207ENST00000617054 ALG5Q9Y673 324 aa6.76□□□□□ -1.33
NEK3-207ENST00000617054 LRBAP50851 2863 aa6.76□□□□□ -1.33
NEK3-207ENST00000617054 A0A0A6YYD4 124 aa6.76□□□□□ -1.33
NEK3-207ENST00000617054 LOC390937A0A1W2PQ73 354 aa6.76□□□□□ -1.33
NEK3-207ENST00000617054 MEGF11A6BM72 1044 aa6.76□□□□□ -1.33
NEK3-207ENST00000617054 GABARAPH6UMI1 98 aa6.76□□□□□ -1.33
NEK3-207ENST00000617054 SOCS1O15524 211 aa6.76□□□□□ -1.33
NEK3-207ENST00000617054 CRTAPO75718 401 aaPredicted RBP6.76□□□□□ -1.33
NEK3-207ENST00000617054 CCNKO75909 580 aa6.76□□□□□ -1.33
NEK3-207ENST00000617054 AGFG2O95081 481 aa6.76□□□□□ -1.33
NEK3-207ENST00000617054 IGLV3-1P01715 115 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 174.8 ms