RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 CNTD2Q9H8S5 307 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 IGLV3-19P01714 112 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 TTRP02766 147 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 TK1P04183 234 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 FOSL1P15407 271 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 POU3F2P20265 443 aaPredicted RBP5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 SERPINF1P36955 418 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 CARD18P57730 90 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 PCBD1P61457 104 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 HLXQ14774 488 aaPredicted RBP5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 EXT1Q16394 746 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 CEACAM16Q2WEN9 425 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 MEX3BQ6ZN04 569 aaKnown RBP5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 MRPL21Q7Z2W9 205 aaKnown RBP5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 RTN4IP1Q8WWV3 396 aaPredicted RBP5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 ST8SIA4Q92187 359 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 EMG1Q92979 244 aaKnown RBP5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 HRH4Q9H3N8 390 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 ZFP64Q9NPA5 681 aa5.02□□□□□ -1.61
SYNCRIP-204ENST00000616122 FAM221AA4D161 298 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 A6NLC8 198 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 IGF2P01344 180 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 PMP2P02689 132 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 GP1BAP07359 652 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 NMBP08949 121 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 FAM157BP0CG42 384 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 B4GALT1P15291 398 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 PRSS12P56730 875 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 MFGE8Q08431 387 aaPredicted RBP5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 KISS1Q15726 138 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 LINC00696Q6ZRV3 163 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 OR4D6Q8NGJ1 314 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 PIGQQ9BRB3 760 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 RAB33BQ9H082 229 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 MCTS1Q9ULC4 181 aaKnown RBP5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 NCOA6Q14686 2063 aaPredicted RBP5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 A0A1B0GTQ1 180 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 SERPINE2P07093 398 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 TGFBR3Q03167 851 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 C1orf100Q5SVJ3 147 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 UNQ6126/PRO20091Q6UXV3 157 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 OR2Y1Q8NGV0 311 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 SPIN2AQ99865 258 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 SPIN2BQ9BPZ2 258 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 UQCC2Q9BRT2 126 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 CA10Q9NS85 328 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 PCDHGA1Q9Y5H4 931 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 A0A1B0GV50 99 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 A0A1W2PQM1 296 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 J3QRE1 110 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 K7EPK0 472 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 SLC33A1O00400 549 aaPredicted RBP5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 ADAP1O75689 374 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 M6PRP20645 277 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 CX3CR1P49238 355 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 PPT1P50897 306 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 FAM71E2Q8N5Q1 922 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 DTWD2Q8NBA8 298 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 BHLHE23Q8NDY6 225 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 PAPOLGQ9BWT3 736 aaKnown RBP5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 TECTAO75443 2155 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 LOC102725191A0A1B0GVB3 256 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 CD63P08962 238 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 PATE4P0C8F1 98 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 CCL7P80098 99 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 MALLQ13021 153 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 CLN3Q13286 438 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 SLC25A26Q70HW3 274 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 BPHLQ86WA6 291 aaPredicted RBP5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 PAQR8Q8TEZ7 354 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 ADAT3Q96EY9 351 aaPredicted RBP5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 RRNAD1Q96FB5 475 aaKnown RBP5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 SLC5A7Q9GZV3 580 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 BCO1Q9HAY6 547 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 BOKQ9UMX3 212 aaPredicted RBP5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 TRBV5-7A0A0A0MS05 114 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 TEX51A0A1B0GUA7 166 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 HMSDA8MTL9 139 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 TMEM255AQ5JRV8 349 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 FDX2Q6P4F2 183 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 RAB11FIP2Q7L804 512 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 OR6X1Q8NH79 312 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 OR2AE1Q8NHA4 323 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 ST7LQ8TDW4 575 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 RNF141Q8WVD5 230 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 DNASE2BQ8WZ79 361 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 ARHGAP5-AS1Q96IT6 56 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 POFUT1Q9H488 388 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 NPDC1Q9NQX5 325 aaPredicted RBP5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 GHRLQ9UBU3 117 aa5.01□□□□□ -1.61
SYNCRIP-204ENST00000616122 SERPINE3A8MV23 424 aa5□□□□□ -1.61
SYNCRIP-204ENST00000616122 ST8SIA3O43173 380 aa5□□□□□ -1.61
SYNCRIP-204ENST00000616122 ZNF806P0C7X5 589 aa5□□□□□ -1.61
SYNCRIP-204ENST00000616122 HIST1H1DP16402 221 aaKnown RBP5□□□□□ -1.61
SYNCRIP-204ENST00000616122 DUSP1P28562 367 aa5□□□□□ -1.61
SYNCRIP-204ENST00000616122 RAC1P63000 192 aa5□□□□□ -1.61
SYNCRIP-204ENST00000616122 MRPS34P82930 218 aaKnown RBP5□□□□□ -1.61
SYNCRIP-204ENST00000616122 C1QTNF12Q5T7M4 302 aa5□□□□□ -1.61
SYNCRIP-204ENST00000616122 H3F3CQ6NXT2 135 aa5□□□□□ -1.61
SYNCRIP-204ENST00000616122 WDR74Q6RFH5 385 aaPredicted RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms