RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 P2RX4Q99571 388 aa7.96□□□□□ -1.13
TTC28-208ENST00000612946 C9orf170A2RU37 121 aa7.96□□□□□ -1.13
TTC28-208ENST00000612946 SFT2D2O95562 160 aa7.96□□□□□ -1.13
TTC28-208ENST00000612946 HLA-DQA1P01909 254 aa7.96□□□□□ -1.13
TTC28-208ENST00000612946 Q6ZSR9 355 aa7.96□□□□□ -1.13
TTC28-208ENST00000612946 H1FOOQ8IZA3 346 aaPredicted RBP7.96□□□□□ -1.13
TTC28-208ENST00000612946 OR10G8Q8NGN5 311 aa7.96□□□□□ -1.13
TTC28-208ENST00000612946 OR5K2Q8NHB8 316 aa7.96□□□□□ -1.13
TTC28-208ENST00000612946 PP6455Q8WZ26 134 aa7.96□□□□□ -1.13
TTC28-208ENST00000612946 RNF167Q9H6Y7 350 aa7.96□□□□□ -1.13
TTC28-208ENST00000612946 AUNIPQ9H7T9 357 aa7.96□□□□□ -1.13
TTC28-208ENST00000612946 SPANXCQ9NY87 97 aa7.96□□□□□ -1.13
TTC28-208ENST00000612946 PLAGL1Q9UM63 463 aa7.96□□□□□ -1.13
TTC28-208ENST00000612946 A0A0U1RQF3 1178 aa7.96□□□□□ -1.13
TTC28-208ENST00000612946 H3BMH7 237 aa7.96□□□□□ -1.13
TTC28-208ENST00000612946 ID2Q02363 134 aa7.96□□□□□ -1.13
TTC28-208ENST00000612946 TMEM167BQ9NRX6 74 aa7.96□□□□□ -1.13
TTC28-208ENST00000612946 A0A0J9YY10 115 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 CLEC18AA5D8T8 446 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 VIPR2P41587 438 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 BTG2P78543 158 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 MFAP5Q13361 173 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 RTP2Q5QGT7 225 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 Q6ZVL8 140 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 CLEC18CQ8NCF0 446 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 OR1P1Q8NH06 330 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 CAMTA1Q9Y6Y1 1673 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 KLRG2A4D1S0 409 aaPredicted RBP7.96□□□□□ -1.14
TTC28-208ENST00000612946 SLC31A1O15431 190 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 TAPBPO15533 448 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 HPP00738 406 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 C8AP07357 584 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 MMP9P14780 707 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 C21orf58P58505 322 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 C6orf201Q7Z4U5 140 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 BARHL1Q9BZE3 327 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 TNFSF12O43508 249 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 CYB5R3P00387 301 aaPredicted RBP7.96□□□□□ -1.14
TTC28-208ENST00000612946 OR4Q2P0C623 313 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 PARM1Q6UWI2 310 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 GRASPQ7Z6J2 395 aaPredicted RBP7.96□□□□□ -1.14
TTC28-208ENST00000612946 TSEN54Q7Z6J9 526 aaKnown RBP7.96□□□□□ -1.14
TTC28-208ENST00000612946 NMNAT3Q96T66 252 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 MED20Q9H944 212 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 ALKBH4Q9NXW9 302 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 KCNK7Q9Y2U2 307 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 ZBTB42B2RXF5 422 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 J3KTA2 159 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 EIF4E2O60573 245 aaKnown RBP7.96□□□□□ -1.14
TTC28-208ENST00000612946 TTRP02766 147 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 AREGP15514 252 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 FCARP24071 287 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 POU3F1Q03052 451 aaPredicted RBP7.96□□□□□ -1.14
TTC28-208ENST00000612946 SAMD13Q5VXD3 122 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 ADAMTS17Q8TE56 1095 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 C11orf84Q9BUA3 381 aaPredicted RBP7.96□□□□□ -1.14
TTC28-208ENST00000612946 SAP30LQ9HAJ7 183 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 FZD1Q9UP38 647 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 HMX2A2RU54 273 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 G3V3Y1 287 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 M0R082 166 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 VAMP5O95183 116 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 ATF1P18846 271 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 NSDHLQ15738 373 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 MYPOPQ86VE0 399 aaPredicted RBP7.96□□□□□ -1.14
TTC28-208ENST00000612946 FAM174AQ8TBP5 190 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 NRIP2Q9BQI9 281 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 GABRQQ9UN88 632 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 ABCA3Q99758 1704 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 SP3Q02447 781 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 LIPNQ5VXI9 398 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 OSTM1Q86WC4 334 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 GOT1L1Q8NHS2 421 aaPredicted RBP7.96□□□□□ -1.14
TTC28-208ENST00000612946 PTX4Q96A99 478 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 HDAC8Q9BY41 377 aa7.96□□□□□ -1.14
TTC28-208ENST00000612946 P04436 131 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 NMBP08949 121 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 OR5G3P0C626 314 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 NCMAPQ5T1S8 102 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 SH2D5Q6ZV89 423 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 PIPOXQ9P0Z9 390 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 A4GNTQ9UNA3 340 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 AMDHD2Q9Y303 409 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 ANKRD20A5PA0PJZ0 165 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 H3BQ15 152 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 TBX15Q96SF7 602 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 TAS2R4Q9NYW5 299 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 ADAMTSL3P82987 1691 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 ERVH48-1M5A8F1 160 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 OR5D13Q8NGL4 314 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 FGF14Q92915 247 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 IL22RA2Q969J5 263 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 A0A1B0GWA3 101 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 HSPB1P04792 205 aaKnown RBP7.95□□□□□ -1.14
TTC28-208ENST00000612946 SLC25A42Q86VD7 318 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 CASP8AP2Q9UKL3 1982 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 MYOFQ9NZM1 2061 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 SIGLEC1Q9BZZ2 1709 aa7.95□□□□□ -1.14
TTC28-208ENST00000612946 OR2M5A3KFT3 312 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms