RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, human

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-215	ENST00000612795	ZNF823	P16415	610 aa		13.97	□□□□□ -0.17
CSNK1E-215	ENST00000612795	AMY2B	P19961	511 aa		13.97	□□□□□ -0.17
CSNK1E-215	ENST00000612795	DDOST	P39656	456 aa		13.97	□□□□□ -0.17
CSNK1E-215	ENST00000612795	SLC7A2	P52569	658 aa		13.97	□□□□□ -0.17
CSNK1E-215	ENST00000612795	COQ5	Q5HYK3	327 aa		13.97	□□□□□ -0.17
CSNK1E-215	ENST00000612795	OR4K13	Q8NH42	304 aa		13.97	□□□□□ -0.17
CSNK1E-215	ENST00000612795	DUS3L	Q96G46	650 aa	Known RBP	13.97	□□□□□ -0.17
CSNK1E-215	ENST00000612795	OCSTAMP	Q9BR26	566 aa		13.97	□□□□□ -0.17
CSNK1E-215	ENST00000612795	COPS4	Q9BT78	406 aa		13.97	□□□□□ -0.17
CSNK1E-215	ENST00000612795	DNTTIP1	Q9H147	329 aa		13.97	□□□□□ -0.17
CSNK1E-215	ENST00000612795	HAO2	Q9NYQ3	351 aa		13.97	□□□□□ -0.17
CSNK1E-215	ENST00000612795	KCNG2	Q9UJ96	466 aa		13.97	□□□□□ -0.17
CSNK1E-215	ENST00000612795	LOC100653049	A0A140TA62	436 aa		13.96	□□□□□ -0.17
CSNK1E-215	ENST00000612795	BBIP1	A8MTZ0	92 aa		13.96	□□□□□ -0.17
CSNK1E-215	ENST00000612795	KRT34	O76011	436 aa		13.96	□□□□□ -0.17
CSNK1E-215	ENST00000612795	H1F0	P07305	194 aa	Known RBP	13.96	□□□□□ -0.17
CSNK1E-215	ENST00000612795	PF4V1	P10720	104 aa		13.96	□□□□□ -0.17
CSNK1E-215	ENST00000612795	FAH	P16930	419 aa		13.96	□□□□□ -0.17
CSNK1E-215	ENST00000612795	PAICS	P22234	425 aa	Known RBP	13.96	□□□□□ -0.17
CSNK1E-215	ENST00000612795	NOS3	P29474	1203 aa		13.96	□□□□□ -0.17
CSNK1E-215	ENST00000612795	RPS27	P42677	84 aa	Known RBP	13.96	□□□□□ -0.17
CSNK1E-215	ENST00000612795	OMP	P47874	163 aa		13.96	□□□□□ -0.17
CSNK1E-215	ENST00000612795	PRKX	P51817	358 aa		13.96	□□□□□ -0.17
CSNK1E-215	ENST00000612795	ATPAF1	Q5TC12	328 aa	Predicted RBP	13.96	□□□□□ -0.17
CSNK1E-215	ENST00000612795	HCP5	Q6MZN7	132 aa		13.96	□□□□□ -0.17
CSNK1E-215	ENST00000612795	ZBTB46	Q86UZ6	589 aa		13.96	□□□□□ -0.17
CSNK1E-215	ENST00000612795	SDR9C7	Q8NEX9	313 aa		13.96	□□□□□ -0.17
CSNK1E-215	ENST00000612795	MED30	Q96HR3	178 aa		13.96	□□□□□ -0.17
CSNK1E-215	ENST00000612795	HSH2D	Q96JZ2	352 aa		13.96	□□□□□ -0.17
CSNK1E-215	ENST00000612795		A0A0G2JND7	137 aa		13.95	□□□□□ -0.18
CSNK1E-215	ENST00000612795		A0A1W2PRX2	142 aa		13.95	□□□□□ -0.18
CSNK1E-215	ENST00000612795	CDIPT	O14735	213 aa		13.95	□□□□□ -0.18
CSNK1E-215	ENST00000612795	TBX1	O43435	398 aa		13.95	□□□□□ -0.18
CSNK1E-215	ENST00000612795	TFF1	P04155	84 aa		13.95	□□□□□ -0.18
CSNK1E-215	ENST00000612795	HIST1H1C	P16403	213 aa	Known RBP	13.95	□□□□□ -0.18
CSNK1E-215	ENST00000612795	SLC6A6	P31641	620 aa		13.95	□□□□□ -0.18
CSNK1E-215	ENST00000612795	OTX1	P32242	354 aa	Predicted RBP	13.95	□□□□□ -0.18
CSNK1E-215	ENST00000612795	GNAL	P38405	381 aa		13.95	□□□□□ -0.18
CSNK1E-215	ENST00000612795	SLC35A2	P78381	396 aa		13.95	□□□□□ -0.18
CSNK1E-215	ENST00000612795	TAF13	Q15543	124 aa		13.95	□□□□□ -0.18
CSNK1E-215	ENST00000612795	DGUOK	Q16854	277 aa		13.95	□□□□□ -0.18
CSNK1E-215	ENST00000612795	CPLX4	Q7Z7G2	160 aa		13.95	□□□□□ -0.18
CSNK1E-215	ENST00000612795	FAM185A	Q8N0U4	392 aa		13.95	□□□□□ -0.18
CSNK1E-215	ENST00000612795	PAPD5	Q8NDF8	572 aa	Known RBP	13.95	□□□□□ -0.18
CSNK1E-215	ENST00000612795	GAFA1	Q96PS6	74 aa		13.95	□□□□□ -0.18
CSNK1E-215	ENST00000612795	OR5M11	Q96RB7	305 aa		13.95	□□□□□ -0.18
CSNK1E-215	ENST00000612795	ELL3	Q9HB65	397 aa	Predicted RBP	13.95	□□□□□ -0.18
CSNK1E-215	ENST00000612795	GID8	Q9NWU2	228 aa		13.95	□□□□□ -0.18
CSNK1E-215	ENST00000612795	MRPL22	Q9NWU5	206 aa	Known RBP	13.95	□□□□□ -0.18
CSNK1E-215	ENST00000612795	ENPP4	Q9Y6X5	453 aa		13.95	□□□□□ -0.18
CSNK1E-215	ENST00000612795		A0A1W2PRQ8	180 aa		13.94	□□□□□ -0.18
CSNK1E-215	ENST00000612795	PF4	P02776	101 aa		13.94	□□□□□ -0.18
CSNK1E-215	ENST00000612795	MSX2	P35548	267 aa	Predicted RBP	13.94	□□□□□ -0.18
CSNK1E-215	ENST00000612795	LGALS4	P56470	323 aa		13.94	□□□□□ -0.18
CSNK1E-215	ENST00000612795	CAV3	P56539	151 aa		13.94	□□□□□ -0.18
CSNK1E-215	ENST00000612795	DGCR6	Q14129	220 aa		13.94	□□□□□ -0.18
CSNK1E-215	ENST00000612795	TIGD6	Q17RP2	521 aa		13.94	□□□□□ -0.18
CSNK1E-215	ENST00000612795	ZNF788	Q6ZQV5	615 aa		13.94	□□□□□ -0.18
CSNK1E-215	ENST00000612795	CBLL1	Q75N03	491 aa		13.94	□□□□□ -0.18
CSNK1E-215	ENST00000612795	ZDHHC21	Q8IVQ6	265 aa		13.94	□□□□□ -0.18
CSNK1E-215	ENST00000612795	WFDC9	Q8NEX5	89 aa		13.94	□□□□□ -0.18
CSNK1E-215	ENST00000612795	AJUBA	Q96IF1	538 aa		13.94	□□□□□ -0.18
CSNK1E-215	ENST00000612795	RAB3IP	Q96QF0	476 aa	Predicted RBP	13.94	□□□□□ -0.18
CSNK1E-215	ENST00000612795	DDO	Q99489	341 aa		13.94	□□□□□ -0.18
CSNK1E-215	ENST00000612795	IFT27	Q9BW83	186 aa		13.94	□□□□□ -0.18
CSNK1E-215	ENST00000612795	PAPOLG	Q9BWT3	736 aa	Known RBP	13.94	□□□□□ -0.18
CSNK1E-215	ENST00000612795	WDR13	Q9H1Z4	485 aa		13.94	□□□□□ -0.18
CSNK1E-215	ENST00000612795	OR52D1	Q9H346	318 aa		13.94	□□□□□ -0.18
CSNK1E-215	ENST00000612795	FAM32A	Q9Y421	112 aa	Known RBP	13.94	□□□□□ -0.18
CSNK1E-215	ENST00000612795	WI2-2373I1.2	A0A1W2PRP0	233 aa		13.93	□□□□□ -0.18
CSNK1E-215	ENST00000612795	MEGF11	A6BM72	1044 aa		13.93	□□□□□ -0.18
CSNK1E-215	ENST00000612795	OR6C68	A6NDL8	312 aa		13.93	□□□□□ -0.18
CSNK1E-215	ENST00000612795	ANXA2P2	A6NMY6	339 aa		13.93	□□□□□ -0.18
CSNK1E-215	ENST00000612795		E9PQ18	207 aa		13.93	□□□□□ -0.18
CSNK1E-215	ENST00000612795	CXCR6	O00574	342 aa		13.93	□□□□□ -0.18
CSNK1E-215	ENST00000612795	GSTA4	O15217	222 aa		13.93	□□□□□ -0.18
CSNK1E-215	ENST00000612795	SIGLEC5	O15389	551 aa		13.93	□□□□□ -0.18
CSNK1E-215	ENST00000612795	SERPINA1	P01009	418 aa		13.93	□□□□□ -0.18
CSNK1E-215	ENST00000612795	CNN3	Q15417	329 aa	Known RBP	13.93	□□□□□ -0.18
CSNK1E-215	ENST00000612795	MAPRE2	Q15555	327 aa		13.93	□□□□□ -0.18
CSNK1E-215	ENST00000612795	PLA1A	Q53H76	456 aa		13.93	□□□□□ -0.18
CSNK1E-215	ENST00000612795	AGBL2	Q5U5Z8	902 aa		13.93	□□□□□ -0.18
CSNK1E-215	ENST00000612795	METTL21C	Q5VZV1	264 aa		13.93	□□□□□ -0.18
CSNK1E-215	ENST00000612795	SLC16A9	Q7RTY1	509 aa		13.93	□□□□□ -0.18
CSNK1E-215	ENST00000612795	DCXR	Q7Z4W1	244 aa		13.93	□□□□□ -0.18
CSNK1E-215	ENST00000612795		Q8N2B8	174 aa		13.93	□□□□□ -0.18
CSNK1E-215	ENST00000612795	TMEM185A	Q8NFB2	350 aa		13.93	□□□□□ -0.18
CSNK1E-215	ENST00000612795	PROKR2	Q8NFJ6	384 aa		13.93	□□□□□ -0.18
CSNK1E-215	ENST00000612795	SPSB4	Q96A44	273 aa		13.93	□□□□□ -0.18
CSNK1E-215	ENST00000612795	KCNJ15	Q99712	375 aa		13.93	□□□□□ -0.18
CSNK1E-215	ENST00000612795	MICU1	Q9BPX6	476 aa		13.93	□□□□□ -0.18
CSNK1E-215	ENST00000612795	PRSS22	Q9GZN4	317 aa		13.93	□□□□□ -0.18
CSNK1E-215	ENST00000612795	TLNRD1	Q9H1K6	362 aa		13.93	□□□□□ -0.18
CSNK1E-215	ENST00000612795	CENPM	Q9NSP4	180 aa		13.93	□□□□□ -0.18
CSNK1E-215	ENST00000612795	TRBV23-1	A0A0A0MS06	115 aa		13.92	□□□□□ -0.18
CSNK1E-215	ENST00000612795	TRBV4-1	A0A0J9YWV2	114 aa		13.92	□□□□□ -0.18
CSNK1E-215	ENST00000612795	TVP23A	A6NH52	213 aa		13.92	□□□□□ -0.18
CSNK1E-215	ENST00000612795	ARPC3	O15145	178 aa		13.92	□□□□□ -0.18
CSNK1E-215	ENST00000612795	GLCE	O94923	617 aa		13.92	□□□□□ -0.18
CSNK1E-215	ENST00000612795	ANXA2	P07355	339 aa	Known RBP	13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms