RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 C7orf69Q9H7B7 122 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 METTL17Q9H7H0 456 aaPredicted RBP9.69□□□□□ -0.86
CCDC12-209ENST00000604164 RNPEPL1Q9HAU8 725 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 ADGRL4Q9HBW9 690 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 TMEM165Q9HC07 324 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 C1orf123Q9NWV4 160 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.69□□□□□ -0.86
CCDC12-209ENST00000604164 JMJD1CQ15652 2540 aa9.68□□□□□ -0.86
CCDC12-209ENST00000604164 RNF212BA8MTL3 300 aa9.68□□□□□ -0.86
CCDC12-209ENST00000604164 LOC110117498-PIK3R3F6TDL0 507 aa9.68□□□□□ -0.86
CCDC12-209ENST00000604164 H3BNX3 289 aa9.68□□□□□ -0.86
CCDC12-209ENST00000604164 LGALS8O00214 317 aa9.68□□□□□ -0.86
CCDC12-209ENST00000604164 EI24O14681 340 aa9.68□□□□□ -0.86
CCDC12-209ENST00000604164 PHF1O43189 567 aaPredicted RBP9.68□□□□□ -0.86
CCDC12-209ENST00000604164 KRT8P05787 483 aa9.68□□□□□ -0.86
CCDC12-209ENST00000604164 PMELP40967 661 aa9.68□□□□□ -0.86
CCDC12-209ENST00000604164 PITPNBP48739 271 aa9.68□□□□□ -0.86
CCDC12-209ENST00000604164 HCCSP53701 268 aa9.68□□□□□ -0.86
CCDC12-209ENST00000604164 MPPED2Q15777 294 aa9.68□□□□□ -0.86
CCDC12-209ENST00000604164 C11orf91Q3C1V1 193 aa9.68□□□□□ -0.86
CCDC12-209ENST00000604164 ZBTB37Q5TC79 503 aa9.68□□□□□ -0.86
CCDC12-209ENST00000604164 MEDAGQ5VYS4 303 aa9.68□□□□□ -0.86
CCDC12-209ENST00000604164 C1QL2Q7Z5L3 287 aa9.68□□□□□ -0.86
CCDC12-209ENST00000604164 THAP5Q7Z6K1 395 aa9.68□□□□□ -0.86
CCDC12-209ENST00000604164 SEMA6DQ8NFY4 1073 aa9.68□□□□□ -0.86
CCDC12-209ENST00000604164 OR51G2Q8NGK0 314 aa9.68□□□□□ -0.86
CCDC12-209ENST00000604164 ZNF418Q8TF45 676 aaPredicted RBP9.68□□□□□ -0.86
CCDC12-209ENST00000604164 HRASLS5Q96KN8 279 aa9.68□□□□□ -0.86
CCDC12-209ENST00000604164 TMPRSS13Q9BYE2 586 aa9.68□□□□□ -0.86
CCDC12-209ENST00000604164 PBOV1Q9GZY1 135 aa9.68□□□□□ -0.86
CCDC12-209ENST00000604164 S100A14Q9HCY8 104 aa9.68□□□□□ -0.86
CCDC12-209ENST00000604164 FAM206AQ9NX38 181 aa9.68□□□□□ -0.86
CCDC12-209ENST00000604164 CLN8Q9UBY8 286 aa9.68□□□□□ -0.86
CCDC12-209ENST00000604164 NUFIP1Q9UHK0 495 aaKnown RBP9.68□□□□□ -0.86
CCDC12-209ENST00000604164 RHBDD3Q9Y3P4 386 aa9.68□□□□□ -0.86
CCDC12-209ENST00000604164 ZNF816-ZNF321PA0A0X1KG74 233 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 OOEPA6NGQ2 149 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 M0R129 80 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 PSMD9O00233 223 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 MPZL2O60487 215 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 SULT1C4O75897 302 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 MUC1P15941 1255 aaPredicted RBP9.67□□□□□ -0.86
CCDC12-209ENST00000604164 ZNF12P17014 697 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 ANOS1P23352 680 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 FPR2P25090 351 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 ZFP36P26651 326 aaKnown RBP9.67□□□□□ -0.86
CCDC12-209ENST00000604164 POLR2IP36954 125 aaKnown RBP9.67□□□□□ -0.86
CCDC12-209ENST00000604164 CFHR2P36980 270 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 RIPPLY1Q0D2K3 151 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 PRDX4Q13162 271 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 MICBQ29980 383 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 SLC25A30Q5SVS4 291 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 BCL2L15Q5TBC7 163 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 CD276Q5ZPR3 534 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 BCDIN3DQ7Z5W3 292 aaKnown RBP9.67□□□□□ -0.86
CCDC12-209ENST00000604164 ZDHHC23Q8IYP9 409 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 CBR4Q8N4T8 237 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 OR1M1Q8NGA1 313 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 SPATA3Q8NHX4 192 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 PIGCQ92535 297 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 MRPL48Q96GC5 212 aaKnown RBP9.67□□□□□ -0.86
CCDC12-209ENST00000604164 JMJD8Q96S16 334 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 OCEL1Q9H607 264 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 ZNF319Q9P2F9 582 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 ERVK-18Q9QC07 812 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 GTF2A1LQ9UNN4 478 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 COPS3Q9UNS2 423 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 PCDHGB1Q9Y5G3 927 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 SNX5Q9Y5X3 404 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 AUP1Q9Y679 476 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 R4GMQ9 66 aa9.67□□□□□ -0.86
CCDC12-209ENST00000604164 LOC105371242A0A075B767 164 aa9.66□□□□□ -0.86
CCDC12-209ENST00000604164 DHRS7CA6NNS2 312 aa9.66□□□□□ -0.86
CCDC12-209ENST00000604164 ZNF850A8MQ14 1090 aa9.66□□□□□ -0.86
CCDC12-209ENST00000604164 DHRS3O75911 302 aa9.66□□□□□ -0.86
CCDC12-209ENST00000604164 ZNF205O95201 554 aa9.66□□□□□ -0.86
CCDC12-209ENST00000604164 PPIAL4GP0DN37 164 aa9.66□□□□□ -0.86
CCDC12-209ENST00000604164 EPHA1P21709 976 aa9.66□□□□□ -0.86
CCDC12-209ENST00000604164 MTNR1AP48039 350 aa9.66□□□□□ -0.86
CCDC12-209ENST00000604164 SNRPGP62308 76 aaKnown RBP9.66□□□□□ -0.86
CCDC12-209ENST00000604164 ACTC1P68032 377 aa9.66□□□□□ -0.86
CCDC12-209ENST00000604164 ACTA1P68133 377 aa9.66□□□□□ -0.86
CCDC12-209ENST00000604164 ZNF154Q13106 437 aa9.66□□□□□ -0.86
CCDC12-209ENST00000604164 ARMCX4Q5H9R4 360 aa9.66□□□□□ -0.86
CCDC12-209ENST00000604164 PLEKHG7Q6ZR37 379 aa9.66□□□□□ -0.86
CCDC12-209ENST00000604164 ZBTB49Q6ZSB9 765 aa9.66□□□□□ -0.86
CCDC12-209ENST00000604164 KCTD8Q6ZWB6 473 aa9.66□□□□□ -0.86
CCDC12-209ENST00000604164 KRT74Q7RTS7 529 aa9.66□□□□□ -0.86
CCDC12-209ENST00000604164 FAM220AQ7Z4H9 259 aa9.66□□□□□ -0.86
CCDC12-209ENST00000604164 KCTD20Q7Z5Y7 419 aa9.66□□□□□ -0.86
CCDC12-209ENST00000604164 PQLC1Q8N2U9 271 aa9.66□□□□□ -0.86
CCDC12-209ENST00000604164 YIPF7Q8N8F6 280 aa9.66□□□□□ -0.86
CCDC12-209ENST00000604164 BOLLQ8N9W6 283 aaKnown RBP9.66□□□□□ -0.86
CCDC12-209ENST00000604164 CCDC54Q8NEL0 328 aa9.66□□□□□ -0.86
CCDC12-209ENST00000604164 DEFB108BQ8NET1 73 aa9.66□□□□□ -0.86
CCDC12-209ENST00000604164 OR10H4Q8NGA5 316 aa9.66□□□□□ -0.86
CCDC12-209ENST00000604164 OR10Z1Q8NGY1 313 aa9.66□□□□□ -0.86
CCDC12-209ENST00000604164 OR51E1Q8TCB6 317 aa9.66□□□□□ -0.86
CCDC12-209ENST00000604164 RAB40AQ8WXH6 277 aa9.66□□□□□ -0.86
CCDC12-209ENST00000604164 OR5P3Q8WZ94 311 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms