RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 OR2V2Q96R30 315 aa11.76□□□□□ -0.53
RNF40-212ENST00000602784 PIMREGQ9BSJ6 248 aa11.76□□□□□ -0.53
RNF40-212ENST00000602784 TMUB1Q9BVT8 246 aa11.76□□□□□ -0.53
RNF40-212ENST00000602784 FRRS1LQ9P0K9 344 aa11.76□□□□□ -0.53
RNF40-212ENST00000602784 TPRKBQ9Y3C4 175 aa11.76□□□□□ -0.53
RNF40-212ENST00000602784 RHBDD3Q9Y3P4 386 aa11.76□□□□□ -0.53
RNF40-212ENST00000602784 MPC1Q9Y5U8 109 aa11.76□□□□□ -0.53
RNF40-212ENST00000602784 IGHV4-30-2A0A087WSY4 118 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.75□□□□□ -0.53
RNF40-212ENST00000602784 ZNF816-ZNF321PA0A0X1KG74 233 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 F5H5P2 479 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 HLA-DPB1P04440 258 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 ZNF12P17014 697 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 GNALP38405 381 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 KIR3DL2P43630 455 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 GBX2P52951 348 aaPredicted RBP11.75□□□□□ -0.53
RNF40-212ENST00000602784 NANOS3P60323 173 aaKnown RBP11.75□□□□□ -0.53
RNF40-212ENST00000602784 MVKQ03426 396 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 SLC3A1Q07837 685 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 RIPPLY1Q0D2K3 151 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 MAB21L1Q13394 359 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 ALKBH1Q13686 389 aaKnown RBP11.75□□□□□ -0.53
RNF40-212ENST00000602784 CCDC58Q4VC31 144 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 SPRNQ5BIV9 151 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 TMEM244Q5VVB8 128 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 AHSA2Q719I0 299 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 COMMD2Q86X83 199 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 STX19Q8N4C7 294 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 KLHL36Q8N4N3 616 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 ITLN1Q8WWA0 313 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 FAM71F1Q96KD3 344 aaPredicted RBP11.75□□□□□ -0.53
RNF40-212ENST00000602784 CNBD2Q96M20 576 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 SOX7Q9BT81 388 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 ADAT1Q9BUB4 502 aaKnown RBP11.75□□□□□ -0.53
RNF40-212ENST00000602784 REG4Q9BYZ8 158 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 DUSP21Q9H596 190 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 GCM1Q9NP62 436 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 C14orf119Q9NWQ9 140 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 V9GYS6 101 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 ACANP16112 2415 aa11.75□□□□□ -0.53
RNF40-212ENST00000602784 A0A1B0GVI7 797 aa11.74□□□□□ -0.53
RNF40-212ENST00000602784 TRIM64A6NGJ6 449 aa11.74□□□□□ -0.53
RNF40-212ENST00000602784 TRIM64BA6NI03 449 aa11.74□□□□□ -0.53
RNF40-212ENST00000602784 OR4C45A6NMZ5 311 aa11.74□□□□□ -0.53
RNF40-212ENST00000602784 PTGES3LE9PB15 166 aa11.74□□□□□ -0.53
RNF40-212ENST00000602784 LYNX1G3V0Z9 82 aa11.74□□□□□ -0.53
RNF40-212ENST00000602784 P2RY10O00398 339 aa11.74□□□□□ -0.53
RNF40-212ENST00000602784 CDC14BO60729 498 aa11.74□□□□□ -0.53
RNF40-212ENST00000602784 CDK1P06493 297 aa11.74□□□□□ -0.53
RNF40-212ENST00000602784 LYNX1P0DP58 116 aa11.74□□□□□ -0.53
RNF40-212ENST00000602784 CRHBPP24387 322 aa11.74□□□□□ -0.53
RNF40-212ENST00000602784 C21orf33P30042 268 aaPredicted RBP11.74□□□□□ -0.53
RNF40-212ENST00000602784 NR4A2P43354 598 aa11.74□□□□□ -0.53
RNF40-212ENST00000602784 SLC35A2P78381 396 aa11.74□□□□□ -0.53
RNF40-212ENST00000602784 CARTPTQ16568 116 aa11.74□□□□□ -0.53
RNF40-212ENST00000602784 ZNF181Q2M3W8 571 aa11.74□□□□□ -0.53
RNF40-212ENST00000602784 RBM48Q5RL73 367 aaKnown RBP11.74□□□□□ -0.53
RNF40-212ENST00000602784 TMEM42Q69YG0 159 aa11.74□□□□□ -0.53
RNF40-212ENST00000602784 RPL22L1Q6P5R6 122 aaKnown RBP11.74□□□□□ -0.53
RNF40-212ENST00000602784 ZNF485Q8NCK3 441 aa11.74□□□□□ -0.53
RNF40-212ENST00000602784 OR14K1Q8NGZ2 314 aa11.74□□□□□ -0.53
RNF40-212ENST00000602784 C10orf35Q96D05 121 aa11.74□□□□□ -0.53
RNF40-212ENST00000602784 PAPOLGQ9BWT3 736 aaKnown RBP11.74□□□□□ -0.53
RNF40-212ENST00000602784 CDCA4Q9BXL8 241 aa11.74□□□□□ -0.53
RNF40-212ENST00000602784 ZNF275Q9NSD4 429 aaPredicted RBP11.74□□□□□ -0.53
RNF40-212ENST00000602784 BABAM2Q9NXR7 383 aa11.74□□□□□ -0.53
RNF40-212ENST00000602784 CLEC2DQ9UHP7 191 aa11.74□□□□□ -0.53
RNF40-212ENST00000602784 ENPP5Q9UJA9 477 aa11.74□□□□□ -0.53
RNF40-212ENST00000602784 PPP1R3CQ9UQK1 317 aa11.74□□□□□ -0.53
RNF40-212ENST00000602784 PCDHGB5Q9Y5G0 923 aa11.74□□□□□ -0.53
RNF40-212ENST00000602784 F8P00451 2351 aa11.74□□□□□ -0.53
RNF40-212ENST00000602784 A0A096LNT2 108 aa11.73□□□□□ -0.53
RNF40-212ENST00000602784 TMEM212A6NML5 194 aa11.73□□□□□ -0.53
RNF40-212ENST00000602784 ANXA2P2A6NMY6 339 aa11.73□□□□□ -0.53
RNF40-212ENST00000602784 E9PI62 339 aa11.73□□□□□ -0.53
RNF40-212ENST00000602784 H7C1Q1 480 aa11.73□□□□□ -0.53
RNF40-212ENST00000602784 SYT7O43581 403 aa11.73□□□□□ -0.53
RNF40-212ENST00000602784 CD99P14209 185 aa11.73□□□□□ -0.53
RNF40-212ENST00000602784 LOXL1Q08397 574 aaPredicted RBP11.73□□□□□ -0.53
RNF40-212ENST00000602784 PRDX4Q13162 271 aa11.73□□□□□ -0.53
RNF40-212ENST00000602784 OR2G6Q5TZ20 316 aa11.73□□□□□ -0.53
RNF40-212ENST00000602784 OR8S1Q8NH09 359 aa11.73□□□□□ -0.53
RNF40-212ENST00000602784 Q8TCH9 128 aa11.73□□□□□ -0.53
RNF40-212ENST00000602784 RPS4Y2Q8TD47 263 aa11.73□□□□□ -0.53
RNF40-212ENST00000602784 OR5P3Q8WZ94 311 aa11.73□□□□□ -0.53
RNF40-212ENST00000602784 CCL17Q92583 94 aa11.73□□□□□ -0.53
RNF40-212ENST00000602784 ITPKCQ96DU7 683 aa11.73□□□□□ -0.53
RNF40-212ENST00000602784 COX4I2Q96KJ9 171 aa11.73□□□□□ -0.53
RNF40-212ENST00000602784 TMEM106BQ9NUM4 274 aa11.73□□□□□ -0.53
RNF40-212ENST00000602784 ERGIC3Q9Y282 383 aa11.73□□□□□ -0.53
RNF40-212ENST00000602784 PIGLQ9Y2B2 252 aa11.73□□□□□ -0.53
RNF40-212ENST00000602784 VPS13CQ709C8 3753 aa11.73□□□□□ -0.53
RNF40-212ENST00000602784 LOC100289279A0A1B0GTE1 492 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 LOC107986453A0A1B0GWG9 222 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 ZNF850A8MQ14 1090 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 CLDN25C9JDP6 229 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 RNF223E7ERA6 249 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 OGG1O15527 345 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 ZFPL1O95159 310 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 FSTL3O95633 263 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms