RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 COL9A3Q14050 684 aaPredicted RBP11.13□□□□□ -0.63
SHANK2-218ENST00000601538 C18orf21Q32NC0 220 aaPredicted RBP11.13□□□□□ -0.63
SHANK2-218ENST00000601538 SH2D5Q6ZV89 423 aa11.13□□□□□ -0.63
SHANK2-218ENST00000601538 PRAMEF26H0Y7S4 382 aa11.13□□□□□ -0.63
SHANK2-218ENST00000601538 FABP2P12104 132 aa11.13□□□□□ -0.63
SHANK2-218ENST00000601538 HTR1DP28221 377 aa11.13□□□□□ -0.63
SHANK2-218ENST00000601538 SMAGPQ0VAQ4 97 aa11.13□□□□□ -0.63
SHANK2-218ENST00000601538 GDF7Q7Z4P5 450 aa11.13□□□□□ -0.63
SHANK2-218ENST00000601538 MEX3DQ86XN8 651 aaKnown RBP11.13□□□□□ -0.63
SHANK2-218ENST00000601538 TMEM37Q8WXS4 190 aa11.13□□□□□ -0.63
SHANK2-218ENST00000601538 NXPH3O95157 252 aa11.13□□□□□ -0.63
SHANK2-218ENST00000601538 BMP5P22003 454 aa11.13□□□□□ -0.63
SHANK2-218ENST00000601538 HES1Q14469 280 aa11.13□□□□□ -0.63
SHANK2-218ENST00000601538 TMEM268Q5VZI3 342 aa11.13□□□□□ -0.63
SHANK2-218ENST00000601538 TMEM229BQ8NBD8 167 aa11.13□□□□□ -0.63
SHANK2-218ENST00000601538 LINC00052Q96N35 136 aa11.13□□□□□ -0.63
SHANK2-218ENST00000601538 RAB40CQ96S21 281 aa11.13□□□□□ -0.63
SHANK2-218ENST00000601538 SH2D7A6NKC9 451 aaPredicted RBP11.13□□□□□ -0.63
SHANK2-218ENST00000601538 CLDN17P56750 224 aa11.13□□□□□ -0.63
SHANK2-218ENST00000601538 IER5LQ5T953 404 aa11.13□□□□□ -0.63
SHANK2-218ENST00000601538 POM121L2Q96KW2 1035 aa11.13□□□□□ -0.63
SHANK2-218ENST00000601538 GFRA2O00451 464 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 BTF3P20290 206 aaKnown RBP11.12□□□□□ -0.63
SHANK2-218ENST00000601538 CD68P34810 354 aaPredicted RBP11.12□□□□□ -0.63
SHANK2-218ENST00000601538 RAB38P57729 211 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 DLEU7Q6UYE1 221 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 EGLN2Q96KS0 407 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 OR8B4Q96RC9 309 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 MARCH5Q9NX47 278 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 SLC5A6Q9Y289 635 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 SLC35G1Q2M3R5 365 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 TRILQ7L0X0 811 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 TSACCQ96A04 125 aaPredicted RBP11.12□□□□□ -0.63
SHANK2-218ENST00000601538 ADAT1Q9BUB4 502 aaKnown RBP11.12□□□□□ -0.63
SHANK2-218ENST00000601538 ANKRD61A6NGH8 418 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 MBTPS2O43462 519 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 UBE2V2Q15819 145 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 RTL10Q7L3V2 364 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 AAED1Q7RTV5 226 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 CLEC2DQ9UHP7 191 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 SLC45A2Q9UMX9 530 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 A0A1W2PNV4 684 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 LTC4SQ16873 150 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 TMEM176BQ3YBM2 270 aaPredicted RBP11.12□□□□□ -0.63
SHANK2-218ENST00000601538 C6orf201Q7Z4U5 140 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 OR52L2PQ8NGH6 319 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 MBD3L1Q8WWY6 194 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 ANGPTL4Q9BY76 406 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 ZNF385DQ9H6B1 395 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 TAF1LQ8IZX4 1826 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 UBE2L5PA0A1B0GUS4 154 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 SEMA4FO95754 770 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 DGCR2P98153 550 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 SLC5A10A0PJK1 596 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 SYPL1Q16563 259 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 ACKR1Q16570 336 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 PLA1AQ53H76 456 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 OR5AU1Q8NGC0 362 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 MMP24Q9Y5R2 645 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 CSNK1DP48730 415 aa11.12□□□□□ -0.63
SHANK2-218ENST00000601538 H3BVH4 76 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 VAMP5O95183 116 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 GUCA2BQ16661 112 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 CHST14Q8NCH0 376 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 OR2T10Q8NGZ9 312 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 NAT6Q93015 286 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 IL17CQ9P0M4 197 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 SSR4P51571 173 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 EXOSC7Q15024 291 aaKnown RBP11.11□□□□□ -0.63
SHANK2-218ENST00000601538 H1FNTQ75WM6 255 aaPredicted RBP11.11□□□□□ -0.63
SHANK2-218ENST00000601538 OR5R1Q8NH85 324 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 DTD1Q8TEA8 209 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 DTD2Q96FN9 168 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 DENND4AQ7Z401 1863 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 NDUFS8O00217 210 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 DOK2O60496 412 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 RRADP55042 308 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 EDDM3BP56851 147 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 EID2BQ96D98 161 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 TNFRSF13CQ96RJ3 184 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 KLF7O75840 302 aaPredicted RBP11.11□□□□□ -0.63
SHANK2-218ENST00000601538 MBPP02686 304 aaPredicted RBP11.11□□□□□ -0.63
SHANK2-218ENST00000601538 MRM1Q6IN84 353 aaKnown RBP11.11□□□□□ -0.63
SHANK2-218ENST00000601538 POM121Q96HA1 1249 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 FZD9O00144 591 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 ELNP15502 786 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 ADRA1AP35348 466 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 LGALSLQ3ZCW2 172 aaPredicted RBP11.11□□□□□ -0.63
SHANK2-218ENST00000601538 PRSS45Q7RTY3 260 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 TIMD4Q96H15 378 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 LINC00597Q9H2U6 94 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 MIXL1Q9H2W2 232 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 CLDND1Q9NY35 253 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 NRAPQ86VF7 1730 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 HLA-DQB1P01920 261 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 APOBEC1P41238 236 aaKnown RBP11.11□□□□□ -0.63
SHANK2-218ENST00000601538 DOLPP1Q86YN1 238 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 PARP11Q9NR21 331 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 DSC1Q08554 894 aa11.11□□□□□ -0.63
SHANK2-218ENST00000601538 AMMECR1LQ6DCA0 310 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms