RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 TMEM80Q96HE8 168 aa11.02□□□□□ -0.65
SRRM1-223ENST00000600523 C4orf36Q96KX1 117 aa11.02□□□□□ -0.65
SRRM1-223ENST00000600523 Q9H521 79 aa11.02□□□□□ -0.65
SRRM1-223ENST00000600523 GCM1Q9NP62 436 aa11.02□□□□□ -0.65
SRRM1-223ENST00000600523 FGF20Q9NP95 211 aaPredicted RBP11.02□□□□□ -0.65
SRRM1-223ENST00000600523 TMEM106BQ9NUM4 274 aa11.02□□□□□ -0.65
SRRM1-223ENST00000600523 ACOXLQ9NUZ1 547 aa11.02□□□□□ -0.65
SRRM1-223ENST00000600523 ERVK13-1Q9NX77 482 aa11.02□□□□□ -0.65
SRRM1-223ENST00000600523 TREM2Q9NZC2 230 aa11.02□□□□□ -0.65
SRRM1-223ENST00000600523 CNOT2Q9NZN8 540 aaKnown RBP11.02□□□□□ -0.65
SRRM1-223ENST00000600523 ZNF319Q9P2F9 582 aa11.02□□□□□ -0.65
SRRM1-223ENST00000600523 PIGLQ9Y2B2 252 aa11.02□□□□□ -0.65
SRRM1-223ENST00000600523 H0YL77 283 aa11.01□□□□□ -0.65
SRRM1-223ENST00000600523 PNPP00491 289 aa11.01□□□□□ -0.65
SRRM1-223ENST00000600523 SERPINA3P01011 423 aa11.01□□□□□ -0.65
SRRM1-223ENST00000600523 TTRP02766 147 aa11.01□□□□□ -0.65
SRRM1-223ENST00000600523 CCDC159P0C7I6 412 aa11.01□□□□□ -0.65
SRRM1-223ENST00000600523 GATA4P43694 442 aa11.01□□□□□ -0.65
SRRM1-223ENST00000600523 OR12D2P58182 307 aa11.01□□□□□ -0.65
SRRM1-223ENST00000600523 MVKQ03426 396 aa11.01□□□□□ -0.65
SRRM1-223ENST00000600523 PRDX4Q13162 271 aa11.01□□□□□ -0.65
SRRM1-223ENST00000600523 ZNF181Q2M3W8 571 aa11.01□□□□□ -0.65
SRRM1-223ENST00000600523 ZNF684Q5T5D7 378 aa11.01□□□□□ -0.65
SRRM1-223ENST00000600523 TMEM244Q5VVB8 128 aa11.01□□□□□ -0.65
SRRM1-223ENST00000600523 KCTD8Q6ZWB6 473 aa11.01□□□□□ -0.65
SRRM1-223ENST00000600523 MOGAT3Q86VF5 341 aa11.01□□□□□ -0.65
SRRM1-223ENST00000600523 ZDHHC23Q8IYP9 409 aa11.01□□□□□ -0.65
SRRM1-223ENST00000600523 MUC20Q8N307 709 aaPredicted RBP11.01□□□□□ -0.65
SRRM1-223ENST00000600523 KLHL36Q8N4N3 616 aa11.01□□□□□ -0.65
SRRM1-223ENST00000600523 SPICQ8N5J4 248 aa11.01□□□□□ -0.65
SRRM1-223ENST00000600523 BPIFB6Q8NFQ5 453 aa11.01□□□□□ -0.65
SRRM1-223ENST00000600523 GAL3ST1Q99999 423 aa11.01□□□□□ -0.65
SRRM1-223ENST00000600523 COMMD4Q9H0A8 199 aa11.01□□□□□ -0.65
SRRM1-223ENST00000600523 G6PC2Q9NQR9 355 aa11.01□□□□□ -0.65
SRRM1-223ENST00000600523 PCDHB10Q9UN67 800 aa11.01□□□□□ -0.65
SRRM1-223ENST00000600523 DIMT1Q9UNQ2 313 aaKnown RBP11.01□□□□□ -0.65
SRRM1-223ENST00000600523 SLC22A13Q9Y226 551 aa11.01□□□□□ -0.65
SRRM1-223ENST00000600523 MYRFQ9Y2G1 1151 aa11.01□□□□□ -0.65
SRRM1-223ENST00000600523 RHBDD3Q9Y3P4 386 aa11.01□□□□□ -0.65
SRRM1-223ENST00000600523 NPTNQ9Y639 398 aa11.01□□□□□ -0.65
SRRM1-223ENST00000600523 hCG_1807616A0A1W2PRN6 198 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 TMEM210A6NLX4 147 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 ZNF850A8MQ14 1090 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 P2RY10O00398 339 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 SRSF10O75494 262 aaKnown RBP11□□□□□ -0.65
SRRM1-223ENST00000600523 GRPP07492 148 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 OCM2P0CE71 109 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 OCMP0CE72 109 aaPredicted RBP11□□□□□ -0.65
SRRM1-223ENST00000600523 PIPP12273 146 aaPredicted RBP11□□□□□ -0.65
SRRM1-223ENST00000600523 PSMB10P40306 273 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 CCR9P51686 369 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 KCNJ8Q15842 424 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 ODF4Q2M2E3 257 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 TMEM249Q2WGJ8 235 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 WDR38Q5JTN6 314 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 AVPI1Q5T686 147 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 CYB5R2Q6BCY4 276 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 ZNF676Q8N7Q3 588 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 MAPK1IP1LQ8NDC0 245 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 OR2G2Q8NGZ5 317 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 MYDGFQ969H8 173 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 LYZL4Q96KX0 146 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 JAM3Q9BX67 310 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 NARFLQ9H6Q4 476 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 NEK6Q9HC98 313 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 TRIM36Q9NQ86 728 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 PLCXD1Q9NUJ7 323 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 UFSP2Q9NUQ7 469 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 CAB39Q9Y376 341 aaPredicted RBP11□□□□□ -0.65
SRRM1-223ENST00000600523 WIPI2Q9Y4P8 454 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 CACNG2Q9Y698 323 aa11□□□□□ -0.65
SRRM1-223ENST00000600523 IGHV4-61A0A0C4DH41 118 aa10.99□□□□□ -0.65
SRRM1-223ENST00000600523 OR5B21A6NL26 309 aa10.99□□□□□ -0.65
SRRM1-223ENST00000600523 TMEM212A6NML5 194 aa10.99□□□□□ -0.65
SRRM1-223ENST00000600523 GATBO75879 557 aaKnown RBP10.99□□□□□ -0.65
SRRM1-223ENST00000600523 ACKR3P25106 362 aa10.99□□□□□ -0.65
SRRM1-223ENST00000600523 MDH2P40926 338 aaKnown RBP10.99□□□□□ -0.65
SRRM1-223ENST00000600523 BTG1P62324 171 aa10.99□□□□□ -0.65
SRRM1-223ENST00000600523 ST3GAL4Q11206 333 aa10.99□□□□□ -0.65
SRRM1-223ENST00000600523 MAB21L1Q13394 359 aa10.99□□□□□ -0.65
SRRM1-223ENST00000600523 CCDC58Q4VC31 144 aa10.99□□□□□ -0.65
SRRM1-223ENST00000600523 CLVS2Q5SYC1 327 aa10.99□□□□□ -0.65
SRRM1-223ENST00000600523 PLCXD3Q63HM9 321 aa10.99□□□□□ -0.65
SRRM1-223ENST00000600523 FDX2Q6P4F2 183 aa10.99□□□□□ -0.65
SRRM1-223ENST00000600523 AHSA2Q719I0 299 aa10.99□□□□□ -0.65
SRRM1-223ENST00000600523 LURAP1LQ8IV03 231 aa10.99□□□□□ -0.65
SRRM1-223ENST00000600523 Q8TCH9 128 aa10.99□□□□□ -0.65
SRRM1-223ENST00000600523 C10orf35Q96D05 121 aa10.99□□□□□ -0.65
SRRM1-223ENST00000600523 RNF170Q96K19 258 aa10.99□□□□□ -0.65
SRRM1-223ENST00000600523 TECTBQ96PL2 329 aa10.99□□□□□ -0.65
SRRM1-223ENST00000600523 ANKRD60Q9BZ19 345 aa10.99□□□□□ -0.65
SRRM1-223ENST00000600523 RNF7Q9UBF6 113 aa10.99□□□□□ -0.65
SRRM1-223ENST00000600523 BLOC1S6Q9UL45 172 aa10.99□□□□□ -0.65
SRRM1-223ENST00000600523 RAB26Q9ULW5 256 aa10.99□□□□□ -0.65
SRRM1-223ENST00000600523 HHLA2Q9UM44 414 aa10.99□□□□□ -0.65
SRRM1-223ENST00000600523 SLC7A11Q9UPY5 501 aa10.99□□□□□ -0.65
SRRM1-223ENST00000600523 ERGIC3Q9Y282 383 aa10.99□□□□□ -0.65
SRRM1-223ENST00000600523 TPRKBQ9Y3C4 175 aa10.99□□□□□ -0.65
SRRM1-223ENST00000600523 TRBV2A0A0J9YWF9 115 aa10.98□□□□□ -0.65
SRRM1-223ENST00000600523 IGHV3-64DA0A0J9YX35 117 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms