RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 MS4A7Q9GZW8 240 aaPredicted RBP11.96□□□□□ -0.49
IRF3-224ENST00000599680 ABCB9Q9NP78 766 aa11.96□□□□□ -0.49
IRF3-224ENST00000599680 IKZF2Q9UKS7 526 aa11.96□□□□□ -0.49
IRF3-224ENST00000599680 RHBDD3Q9Y3P4 386 aa11.96□□□□□ -0.49
IRF3-224ENST00000599680 MPC1Q9Y5U8 109 aa11.96□□□□□ -0.49
IRF3-224ENST00000599680 PSMD9O00233 223 aa11.95□□□□□ -0.5
IRF3-224ENST00000599680 ENSAO43768 121 aaKnown RBP11.95□□□□□ -0.5
IRF3-224ENST00000599680 PRKYO43930 277 aa11.95□□□□□ -0.5
IRF3-224ENST00000599680 MITFO75030 526 aaPredicted RBP11.95□□□□□ -0.5
IRF3-224ENST00000599680 ALOX5APP20292 161 aa11.95□□□□□ -0.5
IRF3-224ENST00000599680 PAX8Q06710 450 aa11.95□□□□□ -0.5
IRF3-224ENST00000599680 ZNF829Q3KNS6 432 aaPredicted RBP11.95□□□□□ -0.5
IRF3-224ENST00000599680 C12orf54Q6X4T0 127 aa11.95□□□□□ -0.5
IRF3-224ENST00000599680 KCTD8Q6ZWB6 473 aa11.95□□□□□ -0.5
IRF3-224ENST00000599680 TCEANCQ8N8B7 351 aa11.95□□□□□ -0.5
IRF3-224ENST00000599680 OR1M1Q8NGA1 313 aa11.95□□□□□ -0.5
IRF3-224ENST00000599680 OR8B12Q8NGG6 310 aa11.95□□□□□ -0.5
IRF3-224ENST00000599680 TMEM163Q8TC26 289 aa11.95□□□□□ -0.5
IRF3-224ENST00000599680 LRRC29Q8WV35 223 aa11.95□□□□□ -0.5
IRF3-224ENST00000599680 ASB17Q8WXJ9 295 aa11.95□□□□□ -0.5
IRF3-224ENST00000599680 LRTOMTQ8WZ04 291 aa11.95□□□□□ -0.5
IRF3-224ENST00000599680 HIST1H2AAQ96QV6 131 aa11.95□□□□□ -0.5
IRF3-224ENST00000599680 TTTY10Q9BZA0 68 aa11.95□□□□□ -0.5
IRF3-224ENST00000599680 GABARAPL1Q9H0R8 117 aa11.95□□□□□ -0.5
IRF3-224ENST00000599680 RNPEPL1Q9HAU8 725 aa11.95□□□□□ -0.5
IRF3-224ENST00000599680 ZNF319Q9P2F9 582 aa11.95□□□□□ -0.5
IRF3-224ENST00000599680 GTF2A1LQ9UNN4 478 aa11.95□□□□□ -0.5
IRF3-224ENST00000599680 IGHV3OR15-7A0A075B7D8 119 aa11.94□□□□□ -0.5
IRF3-224ENST00000599680 KIR2DS1A0A191URI9 304 aa11.94□□□□□ -0.5
IRF3-224ENST00000599680 TMEM269A0A1B0GVZ9 245 aa11.94□□□□□ -0.5
IRF3-224ENST00000599680 CCDC182A6NF36 153 aa11.94□□□□□ -0.5
IRF3-224ENST00000599680 ACOD1A6NK06 481 aa11.94□□□□□ -0.5
IRF3-224ENST00000599680 SLC22A31A6NKX4 558 aa11.94□□□□□ -0.5
IRF3-224ENST00000599680 ZNF850A8MQ14 1090 aa11.94□□□□□ -0.5
IRF3-224ENST00000599680 M0R129 80 aa11.94□□□□□ -0.5
IRF3-224ENST00000599680 ZNF254O75437 659 aa11.94□□□□□ -0.5
IRF3-224ENST00000599680 GYPAP02724 150 aa11.94□□□□□ -0.5
IRF3-224ENST00000599680 PSMB10P40306 273 aa11.94□□□□□ -0.5
IRF3-224ENST00000599680 MAP2K3P46734 347 aa11.94□□□□□ -0.5
IRF3-224ENST00000599680 RIDAP52758 137 aaKnown RBP11.94□□□□□ -0.5
IRF3-224ENST00000599680 ACTR3P61158 418 aa11.94□□□□□ -0.5
IRF3-224ENST00000599680 HOXA4Q00056 320 aaPredicted RBP11.94□□□□□ -0.5
IRF3-224ENST00000599680 PAX2Q02962 417 aa11.94□□□□□ -0.5
IRF3-224ENST00000599680 PRDX4Q13162 271 aa11.94□□□□□ -0.5
IRF3-224ENST00000599680 MICBQ29980 383 aa11.94□□□□□ -0.5
IRF3-224ENST00000599680 SLX4IPQ5VYV7 408 aa11.94□□□□□ -0.5
IRF3-224ENST00000599680 KDM4DQ6B0I6 523 aa11.94□□□□□ -0.5
IRF3-224ENST00000599680 DEGS2Q6QHC5 323 aa11.94□□□□□ -0.5
IRF3-224ENST00000599680 MEPCEQ7L2J0 689 aaKnown RBP11.94□□□□□ -0.5
IRF3-224ENST00000599680 GID4Q8IVV7 300 aa11.94□□□□□ -0.5
IRF3-224ENST00000599680 GCSAMQ8N6F7 178 aa11.94□□□□□ -0.5
IRF3-224ENST00000599680 SIGLECL1Q8N7X8 197 aa11.94□□□□□ -0.5
IRF3-224ENST00000599680 PIGCQ92535 297 aa11.94□□□□□ -0.5
IRF3-224ENST00000599680 GCDHQ92947 438 aaPredicted RBP11.94□□□□□ -0.5
IRF3-224ENST00000599680 DUS3LQ96G46 650 aaKnown RBP11.94□□□□□ -0.5
IRF3-224ENST00000599680 SEMA6AQ9H2E6 1030 aa11.94□□□□□ -0.5
IRF3-224ENST00000599680 ZNF69Q9UC07 566 aa11.94□□□□□ -0.5
IRF3-224ENST00000599680 TENM1Q9UKZ4 2725 aa11.94□□□□□ -0.5
IRF3-224ENST00000599680 IGHV3OR16-10A0A075B7F0 116 aa11.93□□□□□ -0.5
IRF3-224ENST00000599680 TRAV40A0A0B4J280 105 aa11.93□□□□□ -0.5
IRF3-224ENST00000599680 TMEM210A6NLX4 147 aa11.93□□□□□ -0.5
IRF3-224ENST00000599680 ZAR1LA6NP61 321 aa11.93□□□□□ -0.5
IRF3-224ENST00000599680 ZNF670-ZNF695F2Z2N8 137 aa11.93□□□□□ -0.5
IRF3-224ENST00000599680 PPIAL4GP0DN37 164 aa11.93□□□□□ -0.5
IRF3-224ENST00000599680 CSNK2BP67870 215 aa11.93□□□□□ -0.5
IRF3-224ENST00000599680 KLF17Q5JT82 389 aaPredicted RBP11.93□□□□□ -0.5
IRF3-224ENST00000599680 NXNL2Q5VZ03 156 aa11.93□□□□□ -0.5
IRF3-224ENST00000599680 WDR82Q6UXN9 313 aa11.93□□□□□ -0.5
IRF3-224ENST00000599680 CCDC121Q6ZUS5 278 aa11.93□□□□□ -0.5
IRF3-224ENST00000599680 THAP5Q7Z6K1 395 aa11.93□□□□□ -0.5
IRF3-224ENST00000599680 FAM90A1Q86YD7 464 aa11.93□□□□□ -0.5
IRF3-224ENST00000599680 SLC35F2Q8IXU6 374 aa11.93□□□□□ -0.5
IRF3-224ENST00000599680 ZDHHC23Q8IYP9 409 aa11.93□□□□□ -0.5
IRF3-224ENST00000599680 ZNF679Q8IYX0 411 aa11.93□□□□□ -0.5
IRF3-224ENST00000599680 GALNT4Q8N4A0 578 aa11.93□□□□□ -0.5
IRF3-224ENST00000599680 PNLDC1Q8NA58 520 aaKnown RBP11.93□□□□□ -0.5
IRF3-224ENST00000599680 FAM216AQ8WUB2 273 aa11.93□□□□□ -0.5
IRF3-224ENST00000599680 ITPKCQ96DU7 683 aa11.93□□□□□ -0.5
IRF3-224ENST00000599680 CENPNQ96H22 339 aaPredicted RBP11.93□□□□□ -0.5
IRF3-224ENST00000599680 IL4I1Q96RQ9 567 aa11.93□□□□□ -0.5
IRF3-224ENST00000599680 MNTQ99583 582 aa11.93□□□□□ -0.5
IRF3-224ENST00000599680 PKP2Q99959 881 aa11.93□□□□□ -0.5
IRF3-224ENST00000599680 A0A0U1RQV5 110 aa11.92□□□□□ -0.5
IRF3-224ENST00000599680 ZNF816-ZNF321PA0A0X1KG74 233 aa11.92□□□□□ -0.5
IRF3-224ENST00000599680 SAC3D1A6NKF1 404 aa11.92□□□□□ -0.5
IRF3-224ENST00000599680 CDIPTO14735 213 aa11.92□□□□□ -0.5
IRF3-224ENST00000599680 TMPRSS2O15393 492 aa11.92□□□□□ -0.5
IRF3-224ENST00000599680 CST4P01036 141 aa11.92□□□□□ -0.5
IRF3-224ENST00000599680 LHBP01229 141 aa11.92□□□□□ -0.5
IRF3-224ENST00000599680 MUC1P15941 1255 aaPredicted RBP11.92□□□□□ -0.5
IRF3-224ENST00000599680 EGR1P18146 543 aa11.92□□□□□ -0.5
IRF3-224ENST00000599680 ACKR3P25106 362 aa11.92□□□□□ -0.5
IRF3-224ENST00000599680 EPHA2P29317 976 aa11.92□□□□□ -0.5
IRF3-224ENST00000599680 DCTDP32321 178 aa11.92□□□□□ -0.5
IRF3-224ENST00000599680 MTNR1AP48039 350 aa11.92□□□□□ -0.5
IRF3-224ENST00000599680 GMFBP60983 142 aa11.92□□□□□ -0.5
IRF3-224ENST00000599680 CXCR4P61073 352 aa11.92□□□□□ -0.5
IRF3-224ENST00000599680 FGF12P61328 243 aa11.92□□□□□ -0.5
IRF3-224ENST00000599680 POU4F2Q12837 409 aa11.92□□□□□ -0.5
IRF3-224ENST00000599680 TEX36Q5VZQ5 186 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms