RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, human

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAF1-208	ENST00000598594	EHF	Q9NZC4	300 aa		4.37	□□□□□ -1.71
PAF1-208	ENST00000598594	COMMD9	Q9P000	198 aa		4.37	□□□□□ -1.71
PAF1-208	ENST00000598594	PRO0628	Q9UI54	55 aa		4.37	□□□□□ -1.71
PAF1-208	ENST00000598594	TRAPPC4	Q9Y296	219 aa		4.37	□□□□□ -1.71
PAF1-208	ENST00000598594	SLC35A3	Q9Y2D2	325 aa		4.37	□□□□□ -1.71
PAF1-208	ENST00000598594	PPP2R2C	Q9Y2T4	447 aa		4.37	□□□□□ -1.71
PAF1-208	ENST00000598594	PRELID3B	Q9Y3B1	194 aa		4.37	□□□□□ -1.71
PAF1-208	ENST00000598594	ZBED9	Q6R2W3	1325 aa		4.37	□□□□□ -1.71
PAF1-208	ENST00000598594	RTL9	Q8NET4	1388 aa		4.37	□□□□□ -1.71
PAF1-208	ENST00000598594	ZMYM2	Q9UBW7	1377 aa		4.37	□□□□□ -1.71
PAF1-208	ENST00000598594	CHD2	O14647	1828 aa	Known RBP	4.37	□□□□□ -1.71
PAF1-208	ENST00000598594	POGZ	Q7Z3K3	1410 aa		4.37	□□□□□ -1.71
PAF1-208	ENST00000598594	ZNF518A	Q6AHZ1	1483 aa		4.37	□□□□□ -1.71
PAF1-208	ENST00000598594	BICRA	Q9NZM4	1560 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	LOC110117498-PIK3R3	F6TDL0	507 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594		F6UB75	175 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	PHYH	O14832	338 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	ATP6V0E1	O15342	81 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	EIF1B	O60739	113 aa	Known RBP	4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	FOXH1	O75593	365 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	NDUFB8	O95169	186 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	SOX14	O95416	240 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	HPRT1	P00492	218 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	SERPINA7	P05543	415 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	OR10J4	P0C629	311 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	IGHV4-30-4	P0DP06	118 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	MAK	P20794	623 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	OMG	P23515	440 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	S100P	P25815	95 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	SERPINB5	P36952	375 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	SOX3	P41225	446 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	EIF1	P41567	113 aa	Known RBP	4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	OR1D4	P47884	311 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	MEOX2	P50222	304 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	CCR6	P51684	374 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	SMAGP	Q0VAQ4	97 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	UBE2U	Q5VVX9	321 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	C8orf82	Q6P1X6	216 aa	Predicted RBP	4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	SLC34A3	Q8N130	599 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	LGI4	Q8N135	537 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	SVOPL	Q8N434	492 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	ZNF564	Q8TBZ8	553 aa	Predicted RBP	4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	ASB13	Q8WXK3	278 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	MARC2	Q969Z3	335 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	EXOSC8	Q96B26	276 aa	Known RBP	4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	PGLYRP3	Q96LB9	341 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	PPP1R2P1	Q96PQ5	205 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	TBX5	Q99593	518 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	C12orf57	Q99622	126 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	KCTD14	Q9BQ13	255 aa	Predicted RBP	4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	CMSS1	Q9BQ75	279 aa	Known RBP	4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	C2orf88	Q9BSF0	95 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	KIFC1	Q9BW19	673 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	COA1	Q9GZY4	146 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	NMNAT1	Q9HAN9	279 aa	Predicted RBP	4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	ENY2	Q9NPA8	101 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	SLC2A6	Q9UGQ3	507 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	C2orf16	Q68DN1	1984 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	MRC2	Q9UBG0	1479 aa		4.36	□□□□□ -1.71
PAF1-208	ENST00000598594	WDR97	A6NE52	1622 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594		A0A087WUJ7	227 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594		A0A1W2PPI3	338 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	NCBP2L	A6PVI3	153 aa	Known RBP	4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	EVPLL	A8MZ36	301 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	MGRN1	O60291	552 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	PFDN1	O60925	122 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	ATG12	O94817	140 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	SLC2A10	O95528	541 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	GPR75	O95800	540 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	CLDN1	O95832	211 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	SLC2A2	P11168	524 aa	Predicted RBP	4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	MYL12A	P19105	171 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	SHC1	P29353	583 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	SLC6A1	P30531	599 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	GPR183	P32249	361 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	GPX4	P36969	197 aa	Predicted RBP	4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	OR3A4P	P47883	348 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	TCTA	P57738	103 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	RPS13	P62277	151 aa	Known RBP	4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	SLC7A9	P82251	487 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	RPL24	P83731	157 aa	Known RBP	4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	KIR2DS3	Q14952	304 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	LRRC26	Q2I0M4	334 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	SMIM21	Q3B7S5	101 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	XKRX	Q6PP77	449 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594		Q6ZTK2	550 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	SKA3	Q8IX90	412 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	OR2M7	Q8NG81	312 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	OR52E4	Q8NGH9	312 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	OR10G9	Q8NGN4	311 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	OR1P1	Q8NH06	330 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	OR51E1	Q8TCB6	317 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	MAPK15	Q8TD08	544 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	CD200R1	Q8TD46	325 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	RDH5	Q92781	318 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	PPCDC	Q96CD2	204 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	PAGE5	Q96GU1	130 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	ACTR6	Q9GZN1	396 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	CCDC90B	Q9GZT6	254 aa		4.35	□□□□□ -1.71
PAF1-208	ENST00000598594	SH2D2A	Q9NP31	389 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms