RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 IGHV4-61A0A0C4DH41 118 aa16.62■□□□□ 0.25
SHKBP1-214ENST00000597396 ANXA2P2A6NMY6 339 aa16.62■□□□□ 0.25
SHKBP1-214ENST00000597396 IGLV3-1P01715 115 aa16.62■□□□□ 0.25
SHKBP1-214ENST00000597396 MVKQ03426 396 aa16.62■□□□□ 0.25
SHKBP1-214ENST00000597396 MED21Q13503 144 aa16.62■□□□□ 0.25
SHKBP1-214ENST00000597396 WDR38Q5JTN6 314 aa16.62■□□□□ 0.25
SHKBP1-214ENST00000597396 AVPI1Q5T686 147 aa16.62■□□□□ 0.25
SHKBP1-214ENST00000597396 PEG10Q86TG7 708 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-214ENST00000597396 MOGAT3Q86VF5 341 aa16.62■□□□□ 0.25
SHKBP1-214ENST00000597396 SYS1Q8N2H4 156 aa16.62■□□□□ 0.25
SHKBP1-214ENST00000597396 CELF2-AS1Q8N7Q2 184 aa16.62■□□□□ 0.25
SHKBP1-214ENST00000597396 SEMA6DQ8NFY4 1073 aa16.62■□□□□ 0.25
SHKBP1-214ENST00000597396 FBLIM1Q8WUP2 373 aa16.62■□□□□ 0.25
SHKBP1-214ENST00000597396 PIGCQ92535 297 aa16.62■□□□□ 0.25
SHKBP1-214ENST00000597396 RAB1CQ92928 201 aa16.62■□□□□ 0.25
SHKBP1-214ENST00000597396 NARFLQ9H6Q4 476 aa16.62■□□□□ 0.25
SHKBP1-214ENST00000597396 GCM1Q9NP62 436 aa16.62■□□□□ 0.25
SHKBP1-214ENST00000597396 TMEM106BQ9NUM4 274 aa16.62■□□□□ 0.25
SHKBP1-214ENST00000597396 C14orf119Q9NWQ9 140 aa16.62■□□□□ 0.25
SHKBP1-214ENST00000597396 MPC1Q9Y5U8 109 aa16.62■□□□□ 0.25
SHKBP1-214ENST00000597396 ZNF816-ZNF321PA0A0X1KG74 233 aa16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 A0A1B0GVI7 797 aa16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 EFCAB10A6NFE3 127 aa16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 IFNL4K9M1U5 179 aa16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 RRP9O43818 475 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 XPNPEP2O43895 674 aa16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 DHRS3O75911 302 aa16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 MYL12AP19105 171 aa16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 CHN2P52757 468 aa16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 RIPPLY1Q0D2K3 151 aa16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 PRDX4Q13162 271 aa16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 MAB21L1Q13394 359 aa16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 PRAMEF6Q5VXH4 476 aa16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 DOK3Q7L591 496 aa16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 PRSS35Q8N3Z0 413 aa16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 BPIFB6Q8NFQ5 453 aa16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 OR2G2Q8NGZ5 317 aa16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 ZNF420Q8TAQ5 688 aaPredicted RBP16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 GGHQ92820 318 aa16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 PELI1Q96FA3 418 aa16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 TMEM80Q96HE8 168 aa16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 SMR3AQ99954 134 aa16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 JAM3Q9BX67 310 aa16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 ABCB9Q9NP78 766 aa16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 UFSP2Q9NUQ7 469 aa16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 CHCHD3Q9NX63 227 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 DIMT1Q9UNQ2 313 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 PIGLQ9Y2B2 252 aa16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 EXOSC1Q9Y3B2 195 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 NIPBLQ6KC79 2804 aaeCLIP16.61■□□□□ 0.25
SHKBP1-214ENST00000597396 ZNF850A8MQ14 1090 aa16.6■□□□□ 0.25
SHKBP1-214ENST00000597396 CST4P01036 141 aa16.6■□□□□ 0.25
SHKBP1-214ENST00000597396 LIMS3P0CW19 117 aa16.6■□□□□ 0.25
SHKBP1-214ENST00000597396 LIMS4P0CW20 117 aa16.6■□□□□ 0.25
SHKBP1-214ENST00000597396 PIPP12273 146 aaPredicted RBP16.6■□□□□ 0.25
SHKBP1-214ENST00000597396 KIR3DL2P43630 455 aa16.6■□□□□ 0.25
SHKBP1-214ENST00000597396 GATA4P43694 442 aa16.6■□□□□ 0.25
SHKBP1-214ENST00000597396 LAIR2Q6ISS4 152 aa16.6■□□□□ 0.25
SHKBP1-214ENST00000597396 EGFL6Q8IUX8 553 aa16.6■□□□□ 0.25
SHKBP1-214ENST00000597396 OR11L1Q8NGX0 322 aa16.6■□□□□ 0.25
SHKBP1-214ENST00000597396 ERGIC1Q969X5 290 aa16.6■□□□□ 0.25
SHKBP1-214ENST00000597396 MICU1Q9BPX6 476 aa16.6■□□□□ 0.25
SHKBP1-214ENST00000597396 ZNF649Q9BS31 505 aa16.6■□□□□ 0.25
SHKBP1-214ENST00000597396 ISG20L2Q9H9L3 353 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-214ENST00000597396 PLCXD1Q9NUJ7 323 aa16.6■□□□□ 0.25
SHKBP1-214ENST00000597396 DCAF16Q9NXF7 216 aa16.6■□□□□ 0.25
SHKBP1-214ENST00000597396 CNOT2Q9NZN8 540 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-214ENST00000597396 ENPP5Q9UJA9 477 aa16.6■□□□□ 0.25
SHKBP1-214ENST00000597396 WIPI2Q9Y4P8 454 aa16.6■□□□□ 0.25
SHKBP1-214ENST00000597396 A0A1B0GTI1 187 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 ISPDA4D126 451 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 LRP5LA4QPB2 252 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 A6NLC8 198 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 LRRC30A6NM36 301 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 H3BSH0 61 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 SYT7O43581 403 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 GRPP07492 148 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 UBCP0CG48 685 aaKnown RBP16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 IRF2P14316 349 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 FAHP16930 419 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 MYF6P23409 242 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 ETV1P50549 477 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 GBX2P52951 348 aaPredicted RBP16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 ST3GAL4Q11206 333 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 MRPL28Q13084 256 aaKnown RBP16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 HNRNPA0Q13151 305 aaKnown RBP16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 TMEM249Q2WGJ8 235 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 ZBTB37Q5TC79 503 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 FDX2Q6P4F2 183 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 CLEC9AQ6UXN8 241 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 TMPRSS11AQ6ZMR5 421 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 AHSA2Q719I0 299 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 Q71RC1 249 aaPredicted RBP16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 ZDHHC23Q8IYP9 409 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 STX19Q8N4C7 294 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 KLHL36Q8N4N3 616 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 PLPP7Q8NBV4 271 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 HPS1Q92902 700 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 HIST1H2AAQ96QV6 131 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 RTL8AQ9BWD3 113 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms