RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 FPR2P25090 351 aa10.84□□□□□ -0.67
LIG1-212ENST00000596549 CFPP27918 469 aa10.84□□□□□ -0.67
LIG1-212ENST00000596549 HCCSP53701 268 aa10.84□□□□□ -0.67
LIG1-212ENST00000596549 CRISP1P54107 249 aa10.84□□□□□ -0.67
LIG1-212ENST00000596549 RPS7P62081 194 aaKnown RBP10.84□□□□□ -0.67
LIG1-212ENST00000596549 TEX36Q5VZQ5 186 aa10.84□□□□□ -0.67
LIG1-212ENST00000596549 DUX4L9Q6RFH8 374 aaPredicted RBP10.84□□□□□ -0.67
LIG1-212ENST00000596549 WDR82Q6UXN9 313 aa10.84□□□□□ -0.67
LIG1-212ENST00000596549 C12orf54Q6X4T0 127 aa10.84□□□□□ -0.67
LIG1-212ENST00000596549 C9orf139Q6ZV77 190 aa10.84□□□□□ -0.67
LIG1-212ENST00000596549 FGFRL1Q8N441 504 aa10.84□□□□□ -0.67
LIG1-212ENST00000596549 ZNF454Q8N9F8 522 aa10.84□□□□□ -0.67
LIG1-212ENST00000596549 OR1M1Q8NGA1 313 aa10.84□□□□□ -0.67
LIG1-212ENST00000596549 OR8S1Q8NH09 359 aa10.84□□□□□ -0.67
LIG1-212ENST00000596549 HPSE2Q8WWQ2 592 aa10.84□□□□□ -0.67
LIG1-212ENST00000596549 DNAJC9Q8WXX5 260 aa10.84□□□□□ -0.67
LIG1-212ENST00000596549 ITPKCQ96DU7 683 aa10.84□□□□□ -0.67
LIG1-212ENST00000596549 NRBF2Q96F24 287 aa10.84□□□□□ -0.67
LIG1-212ENST00000596549 DUX5Q96PT3 197 aa10.84□□□□□ -0.67
LIG1-212ENST00000596549 PAPOLGQ9BWT3 736 aaKnown RBP10.84□□□□□ -0.67
LIG1-212ENST00000596549 TTTY10Q9BZA0 68 aa10.84□□□□□ -0.67
LIG1-212ENST00000596549 TLNRD1Q9H1K6 362 aa10.84□□□□□ -0.67
LIG1-212ENST00000596549 OR10A2Q9H208 303 aa10.84□□□□□ -0.67
LIG1-212ENST00000596549 C14orf119Q9NWQ9 140 aa10.84□□□□□ -0.67
LIG1-212ENST00000596549 TVP23BQ9NYZ1 205 aa10.84□□□□□ -0.67
LIG1-212ENST00000596549 DUX4Q9UBX2 424 aa10.84□□□□□ -0.67
LIG1-212ENST00000596549 COPS3Q9UNS2 423 aa10.84□□□□□ -0.67
LIG1-212ENST00000596549 RHBDD3Q9Y3P4 386 aa10.84□□□□□ -0.67
LIG1-212ENST00000596549 PSMD9O00233 223 aa10.83□□□□□ -0.68
LIG1-212ENST00000596549 ADAM20O43506 726 aa10.83□□□□□ -0.68
LIG1-212ENST00000596549 CFL1P23528 166 aaKnown RBP10.83□□□□□ -0.68
LIG1-212ENST00000596549 EPHA2P29317 976 aa10.83□□□□□ -0.68
LIG1-212ENST00000596549 NPY4RP50391 375 aa10.83□□□□□ -0.68
LIG1-212ENST00000596549 FGF12P61328 243 aa10.83□□□□□ -0.68
LIG1-212ENST00000596549 PTGES3Q15185 160 aaKnown RBP10.83□□□□□ -0.68
LIG1-212ENST00000596549 ATP6AP1Q15904 470 aa10.83□□□□□ -0.68
LIG1-212ENST00000596549 BCDIN3DQ7Z5W3 292 aaKnown RBP10.83□□□□□ -0.68
LIG1-212ENST00000596549 OR5K1Q8NHB7 308 aa10.83□□□□□ -0.68
LIG1-212ENST00000596549 LRRC29Q8WV35 223 aa10.83□□□□□ -0.68
LIG1-212ENST00000596549 SEH1LQ96EE3 360 aa10.83□□□□□ -0.68
LIG1-212ENST00000596549 GABARAPL1Q9H0R8 117 aa10.83□□□□□ -0.68
LIG1-212ENST00000596549 RGCCQ9H4X1 137 aa10.83□□□□□ -0.68
LIG1-212ENST00000596549 SP140LQ9H930 580 aa10.83□□□□□ -0.68
LIG1-212ENST00000596549 FAM206AQ9NX38 181 aa10.83□□□□□ -0.68
LIG1-212ENST00000596549 TRAV38-1A0A0B4J264 116 aa10.82□□□□□ -0.68
LIG1-212ENST00000596549 SRRM5B3KS81 715 aa10.82□□□□□ -0.68
LIG1-212ENST00000596549 ENSAO43768 121 aaKnown RBP10.82□□□□□ -0.68
LIG1-212ENST00000596549 IGLV3-1P01715 115 aa10.82□□□□□ -0.68
LIG1-212ENST00000596549 SFTPBP07988 381 aa10.82□□□□□ -0.68
LIG1-212ENST00000596549 MMP9P14780 707 aa10.82□□□□□ -0.68
LIG1-212ENST00000596549 POU4F2Q12837 409 aa10.82□□□□□ -0.68
LIG1-212ENST00000596549 PRDX4Q13162 271 aa10.82□□□□□ -0.68
LIG1-212ENST00000596549 KCNJ8Q15842 424 aa10.82□□□□□ -0.68
LIG1-212ENST00000596549 SNAPC1Q16533 368 aa10.82□□□□□ -0.68
LIG1-212ENST00000596549 C12orf73Q69YU5 71 aa10.82□□□□□ -0.68
LIG1-212ENST00000596549 BRD3OSQ6XYD6 125 aa10.82□□□□□ -0.68
LIG1-212ENST00000596549 CSNK2A3Q8NEV1 391 aa10.82□□□□□ -0.68
LIG1-212ENST00000596549 TBX15Q96SF7 602 aa10.82□□□□□ -0.68
LIG1-212ENST00000596549 TEAD3Q99594 435 aa10.82□□□□□ -0.68
LIG1-212ENST00000596549 RASSF4Q9H2L5 321 aa10.82□□□□□ -0.68
LIG1-212ENST00000596549 RNPEPL1Q9HAU8 725 aa10.82□□□□□ -0.68
LIG1-212ENST00000596549 ERVK-18Q9QC07 812 aa10.82□□□□□ -0.68
LIG1-212ENST00000596549 LAMP5Q9UJQ1 280 aa10.82□□□□□ -0.68
LIG1-212ENST00000596549 ZAR1LA6NP61 321 aa10.81□□□□□ -0.68
LIG1-212ENST00000596549 ZNF850A8MQ14 1090 aa10.81□□□□□ -0.68
LIG1-212ENST00000596549 DVL1O14640 695 aa10.81□□□□□ -0.68
LIG1-212ENST00000596549 AMY2BP19961 511 aa10.81□□□□□ -0.68
LIG1-212ENST00000596549 PRTN3P24158 256 aa10.81□□□□□ -0.68
LIG1-212ENST00000596549 DCTDP32321 178 aa10.81□□□□□ -0.68
LIG1-212ENST00000596549 CFHR2P36980 270 aa10.81□□□□□ -0.68
LIG1-212ENST00000596549 GNALP38405 381 aa10.81□□□□□ -0.68
LIG1-212ENST00000596549 EFNB1P98172 346 aa10.81□□□□□ -0.68
LIG1-212ENST00000596549 MFGE8Q08431 387 aaPredicted RBP10.81□□□□□ -0.68
LIG1-212ENST00000596549 MZT1Q08AG7 82 aa10.81□□□□□ -0.68
LIG1-212ENST00000596549 AWAT1Q58HT5 328 aa10.81□□□□□ -0.68
LIG1-212ENST00000596549 WDR38Q5JTN6 314 aa10.81□□□□□ -0.68
LIG1-212ENST00000596549 SLX4IPQ5VYV7 408 aa10.81□□□□□ -0.68
LIG1-212ENST00000596549 RUSC1-AS1Q66K80 236 aa10.81□□□□□ -0.68
LIG1-212ENST00000596549 KDM4DQ6B0I6 523 aa10.81□□□□□ -0.68
LIG1-212ENST00000596549 KRT77Q7Z794 578 aa10.81□□□□□ -0.68
LIG1-212ENST00000596549 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.81□□□□□ -0.68
LIG1-212ENST00000596549 OR5P3Q8WZ94 311 aa10.81□□□□□ -0.68
LIG1-212ENST00000596549 GCDHQ92947 438 aaPredicted RBP10.81□□□□□ -0.68
LIG1-212ENST00000596549 DUS3LQ96G46 650 aaKnown RBP10.81□□□□□ -0.68
LIG1-212ENST00000596549 OR8B4Q96RC9 309 aa10.81□□□□□ -0.68
LIG1-212ENST00000596549 PKP2Q99959 881 aa10.81□□□□□ -0.68
LIG1-212ENST00000596549 YIPF3Q9GZM5 350 aa10.81□□□□□ -0.68
LIG1-212ENST00000596549 MS4A7Q9GZW8 240 aaPredicted RBP10.81□□□□□ -0.68
LIG1-212ENST00000596549 SIRPDQ9H106 197 aa10.81□□□□□ -0.68
LIG1-212ENST00000596549 NIPAL2Q9H841 368 aa10.81□□□□□ -0.68
LIG1-212ENST00000596549 TRIM36Q9NQ86 728 aa10.81□□□□□ -0.68
LIG1-212ENST00000596549 KRT84Q9NSB2 600 aa10.81□□□□□ -0.68
LIG1-212ENST00000596549 KAAG1Q9UBP8 84 aa10.81□□□□□ -0.68
LIG1-212ENST00000596549 ANXA2P2A6NMY6 339 aa10.8□□□□□ -0.68
LIG1-212ENST00000596549 ZNF879B4DU55 563 aa10.8□□□□□ -0.68
LIG1-212ENST00000596549 CDIPTO14735 213 aa10.8□□□□□ -0.68
LIG1-212ENST00000596549 TMPRSS2O15393 492 aa10.8□□□□□ -0.68
LIG1-212ENST00000596549 NDUFA2O43678 99 aa10.8□□□□□ -0.68
LIG1-212ENST00000596549 SRSF10O75494 262 aaKnown RBP10.8□□□□□ -0.68
LIG1-212ENST00000596549 CST4P01036 141 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms