RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 CRYAAP02489 173 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 ALDOBP05062 364 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 PRF1P14222 555 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 RAC2P15153 192 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 ATF1P18846 271 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 PTAFRP25105 342 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 BDKRB2P30411 391 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 PSMD7P51665 324 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 PPP3R1P63098 170 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 SPOCK1Q08629 439 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 DYNC1I2Q13409 638 aaKnown RBP12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 TMEM255AQ5JRV8 349 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 C1orf100Q5SVJ3 147 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 CLVS2Q5SYC1 327 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 SPATA46Q5T0L3 261 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 FAM166AQ6J272 317 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 ALKBH2Q6NS38 261 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 TMEM108Q6UXF1 575 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 LINC00299Q6ZSB3 139 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 NKAIN3Q8N8D7 197 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 DNAAF1Q8NEP3 725 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 CSNK2A3Q8NEV1 391 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 OR6Q1Q8NGQ2 317 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 OR1J1Q8NGS3 322 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 KCTD12Q96CX2 325 aaKnown RBP12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 HAVCR1Q96D42 359 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 CMBLQ96DG6 245 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 OR2J1Q9GZK6 312 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 TMEM138Q9NPI0 162 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 CRIM1Q9NZV1 1036 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 GGT3PA6NGU5 568 aa12.65□□□□□ -0.38
SHKBP1-211ENST00000595945 IFITM5A6NNB3 132 aa12.65□□□□□ -0.38
SHKBP1-211ENST00000595945 ATP6V1G2-DDX39BF2Z307 99 aa12.65□□□□□ -0.38
SHKBP1-211ENST00000595945 AIPO00170 330 aa12.65□□□□□ -0.38
SHKBP1-211ENST00000595945 SLC2A2P11168 524 aaPredicted RBP12.65□□□□□ -0.38
SHKBP1-211ENST00000595945 UBE2V2Q15819 145 aa12.65□□□□□ -0.38
SHKBP1-211ENST00000595945 MBNL2Q5VZF2 373 aaKnown RBP12.65□□□□□ -0.38
SHKBP1-211ENST00000595945 GLT8D1Q68CQ7 371 aa12.65□□□□□ -0.38
SHKBP1-211ENST00000595945 CRIP3Q6Q6R5 217 aa12.65□□□□□ -0.38
SHKBP1-211ENST00000595945 CDH26Q8IXH8 852 aa12.65□□□□□ -0.38
SHKBP1-211ENST00000595945 NUP37Q8NFH4 326 aa12.65□□□□□ -0.38
SHKBP1-211ENST00000595945 KLF14Q8TD94 323 aaPredicted RBP12.65□□□□□ -0.38
SHKBP1-211ENST00000595945 ZC3HAV1LQ96H79 300 aaKnown RBP12.65□□□□□ -0.38
SHKBP1-211ENST00000595945 SMURF1Q9HCE7 757 aa12.65□□□□□ -0.38
SHKBP1-211ENST00000595945 NGBQ9NPG2 151 aa12.65□□□□□ -0.38
SHKBP1-211ENST00000595945 NPDC1Q9NQX5 325 aaPredicted RBP12.65□□□□□ -0.38
SHKBP1-211ENST00000595945 NDRG3Q9UGV2 375 aa12.65□□□□□ -0.38
SHKBP1-211ENST00000595945 IQCF6A8MYZ5 107 aa12.64□□□□□ -0.39
SHKBP1-211ENST00000595945 SLC17A2O00624 439 aa12.64□□□□□ -0.39
SHKBP1-211ENST00000595945 GMDSO60547 372 aa12.64□□□□□ -0.39
SHKBP1-211ENST00000595945 ERCC1P07992 297 aaPredicted RBP12.64□□□□□ -0.39
SHKBP1-211ENST00000595945 SELEP16581 610 aa12.64□□□□□ -0.39
SHKBP1-211ENST00000595945 KITLGP21583 273 aa12.64□□□□□ -0.39
SHKBP1-211ENST00000595945 GLRXP35754 106 aa12.64□□□□□ -0.39
SHKBP1-211ENST00000595945 MPV17P39210 176 aa12.64□□□□□ -0.39
SHKBP1-211ENST00000595945 PSG7Q13046 419 aa12.64□□□□□ -0.39
SHKBP1-211ENST00000595945 SNTB2Q13425 540 aaKnown RBP12.64□□□□□ -0.39
SHKBP1-211ENST00000595945 MSMPQ1L6U9 139 aa12.64□□□□□ -0.39
SHKBP1-211ENST00000595945 NCMAPQ5T1S8 102 aa12.64□□□□□ -0.39
SHKBP1-211ENST00000595945 IDNKQ5T6J7 187 aa12.64□□□□□ -0.39
SHKBP1-211ENST00000595945 OR2T2Q6IF00 324 aa12.64□□□□□ -0.39
SHKBP1-211ENST00000595945 OR52N4Q8NGI2 321 aa12.64□□□□□ -0.39
SHKBP1-211ENST00000595945 LINC01560Q8TB33 94 aa12.64□□□□□ -0.39
SHKBP1-211ENST00000595945 ACOT12Q8WYK0 555 aa12.64□□□□□ -0.39
SHKBP1-211ENST00000595945 AP3S1Q92572 193 aa12.64□□□□□ -0.39
SHKBP1-211ENST00000595945 SLC25A28Q96A46 364 aa12.64□□□□□ -0.39
SHKBP1-211ENST00000595945 TECTBQ96PL2 329 aa12.64□□□□□ -0.39
SHKBP1-211ENST00000595945 GPR173Q9NS66 373 aa12.64□□□□□ -0.39
SHKBP1-211ENST00000595945 KCNN3Q9UGI6 736 aa12.64□□□□□ -0.39
SHKBP1-211ENST00000595945 DAPK2Q9UIK4 370 aa12.64□□□□□ -0.39
SHKBP1-211ENST00000595945 SPEF1Q9Y4P9 236 aa12.64□□□□□ -0.39
SHKBP1-211ENST00000595945 CTDSP2O14595 271 aa12.63□□□□□ -0.39
SHKBP1-211ENST00000595945 LILRA1O75019 489 aa12.63□□□□□ -0.39
SHKBP1-211ENST00000595945 NRASP01111 189 aa12.63□□□□□ -0.39
SHKBP1-211ENST00000595945 AZGP1P25311 298 aaKnown RBP12.63□□□□□ -0.39
SHKBP1-211ENST00000595945 BMXP51813 675 aa12.63□□□□□ -0.39
SHKBP1-211ENST00000595945 BSPH1Q075Z2 132 aa12.63□□□□□ -0.39
SHKBP1-211ENST00000595945 SNTB1Q13884 538 aaKnown RBP12.63□□□□□ -0.39
SHKBP1-211ENST00000595945 ALKBH6Q3KRA9 238 aa12.63□□□□□ -0.39
SHKBP1-211ENST00000595945 ZNF718Q3SXZ3 478 aa12.63□□□□□ -0.39
SHKBP1-211ENST00000595945 HES5Q5TA89 166 aa12.63□□□□□ -0.39
SHKBP1-211ENST00000595945 DDI2Q5TDH0 399 aa12.63□□□□□ -0.39
SHKBP1-211ENST00000595945 RNF144BQ7Z419 303 aa12.63□□□□□ -0.39
SHKBP1-211ENST00000595945 TMEM171Q8WVE6 324 aa12.63□□□□□ -0.39
SHKBP1-211ENST00000595945 FOXRED1Q96CU9 486 aaPredicted RBP12.63□□□□□ -0.39
SHKBP1-211ENST00000595945 TSC22D3Q99576 134 aa12.63□□□□□ -0.39
SHKBP1-211ENST00000595945 C6orf62Q9GZU0 229 aaPredicted RBP12.63□□□□□ -0.39
SHKBP1-211ENST00000595945 MIXL1Q9H2W2 232 aa12.63□□□□□ -0.39
SHKBP1-211ENST00000595945 METTL17Q9H7H0 456 aaPredicted RBP12.63□□□□□ -0.39
SHKBP1-211ENST00000595945 PPP1R3EQ9H7J1 279 aa12.63□□□□□ -0.39
SHKBP1-211ENST00000595945 ABRACLQ9P1F3 81 aa12.63□□□□□ -0.39
SHKBP1-211ENST00000595945 CGGBP1Q9UFW8 167 aaPredicted RBP12.63□□□□□ -0.39
SHKBP1-211ENST00000595945 PURGQ9UJV8 347 aaKnown RBP12.63□□□□□ -0.39
SHKBP1-211ENST00000595945 PEX16Q9Y5Y5 336 aa12.63□□□□□ -0.39
SHKBP1-211ENST00000595945 ADGRG4Q8IZF6 3080 aa12.63□□□□□ -0.39
SHKBP1-211ENST00000595945 RELNP78509 3460 aa12.63□□□□□ -0.39
SHKBP1-211ENST00000595945 CHD3Q12873 2000 aaKnown RBP12.62□□□□□ -0.39
SHKBP1-211ENST00000595945 ARFGEF3Q5TH69 2177 aa12.62□□□□□ -0.39
SHKBP1-211ENST00000595945 A0A0B4J203 849 aa12.62□□□□□ -0.39
SHKBP1-211ENST00000595945 WIPF3A6NGB9 483 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms