RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 EPHA1P21709 976 aa12.62□□□□□ -0.39
TRIM28-205ENST00000595028 ACKR3P25106 362 aa12.62□□□□□ -0.39
TRIM28-205ENST00000595028 DCTDP32321 178 aa12.62□□□□□ -0.39
TRIM28-205ENST00000595028 CD80P33681 288 aa12.62□□□□□ -0.39
TRIM28-205ENST00000595028 POLR2IP36954 125 aaKnown RBP12.62□□□□□ -0.39
TRIM28-205ENST00000595028 GNALP38405 381 aa12.62□□□□□ -0.39
TRIM28-205ENST00000595028 ZNF826PQ6ZT77 177 aa12.62□□□□□ -0.39
TRIM28-205ENST00000595028 SLC35F2Q8IXU6 374 aa12.62□□□□□ -0.39
TRIM28-205ENST00000595028 ZNF679Q8IYX0 411 aa12.62□□□□□ -0.39
TRIM28-205ENST00000595028 C19orf18Q8NEA5 215 aa12.62□□□□□ -0.39
TRIM28-205ENST00000595028 OR8B3Q8NGG8 313 aa12.62□□□□□ -0.39
TRIM28-205ENST00000595028 LYZL4Q96KX0 146 aa12.62□□□□□ -0.39
TRIM28-205ENST00000595028 OR8B2Q96RD0 313 aa12.62□□□□□ -0.39
TRIM28-205ENST00000595028 MNTQ99583 582 aa12.62□□□□□ -0.39
TRIM28-205ENST00000595028 HAO2Q9NYQ3 351 aa12.62□□□□□ -0.39
TRIM28-205ENST00000595028 IKZF2Q9UKS7 526 aa12.62□□□□□ -0.39
TRIM28-205ENST00000595028 INSIG2Q9Y5U4 225 aa12.62□□□□□ -0.39
TRIM28-205ENST00000595028 PKD1L1Q8TDX9 2849 aa12.61□□□□□ -0.39
TRIM28-205ENST00000595028 A0A0U1RQV5 110 aa12.61□□□□□ -0.39
TRIM28-205ENST00000595028 TMEM269A0A1B0GVZ9 245 aa12.61□□□□□ -0.39
TRIM28-205ENST00000595028 hCG_1807616A0A1W2PRN6 198 aa12.61□□□□□ -0.39
TRIM28-205ENST00000595028 ACOD1A6NK06 481 aa12.61□□□□□ -0.39
TRIM28-205ENST00000595028 ANXA2P2A6NMY6 339 aa12.61□□□□□ -0.39
TRIM28-205ENST00000595028 LGALS8O00214 317 aa12.61□□□□□ -0.39
TRIM28-205ENST00000595028 PHYHO14832 338 aa12.61□□□□□ -0.39
TRIM28-205ENST00000595028 ALPLP05186 524 aa12.61□□□□□ -0.39
TRIM28-205ENST00000595028 GRPP07492 148 aa12.61□□□□□ -0.39
TRIM28-205ENST00000595028 PITPNBP48739 271 aa12.61□□□□□ -0.39
TRIM28-205ENST00000595028 RIDAP52758 137 aaKnown RBP12.61□□□□□ -0.39
TRIM28-205ENST00000595028 CXCR4P61073 352 aa12.61□□□□□ -0.39
TRIM28-205ENST00000595028 GNB2P62879 340 aa12.61□□□□□ -0.39
TRIM28-205ENST00000595028 ZNF154Q13106 437 aa12.61□□□□□ -0.39
TRIM28-205ENST00000595028 ZNF829Q3KNS6 432 aaPredicted RBP12.61□□□□□ -0.39
TRIM28-205ENST00000595028 LIPNQ5VXI9 398 aa12.61□□□□□ -0.39
TRIM28-205ENST00000595028 ZNF322Q6U7Q0 402 aaPredicted RBP12.61□□□□□ -0.39
TRIM28-205ENST00000595028 GCSAMQ8N6F7 178 aa12.61□□□□□ -0.39
TRIM28-205ENST00000595028 BOLLQ8N9W6 283 aaKnown RBP12.61□□□□□ -0.39
TRIM28-205ENST00000595028 OR1M1Q8NGA1 313 aa12.61□□□□□ -0.39
TRIM28-205ENST00000595028 OR8J1Q8NGP2 316 aa12.61□□□□□ -0.39
TRIM28-205ENST00000595028 NANPQ8TBE9 248 aa12.61□□□□□ -0.39
TRIM28-205ENST00000595028 ITPKCQ96DU7 683 aa12.61□□□□□ -0.39
TRIM28-205ENST00000595028 OCEL1Q9H607 264 aa12.61□□□□□ -0.39
TRIM28-205ENST00000595028 PPP1R3EQ9H7J1 279 aa12.61□□□□□ -0.39
TRIM28-205ENST00000595028 CLN6Q9NWW5 311 aa12.61□□□□□ -0.39
TRIM28-205ENST00000595028 WARS2Q9UGM6 360 aaKnown RBP12.61□□□□□ -0.39
TRIM28-205ENST00000595028 MPC1Q9Y5U8 109 aa12.61□□□□□ -0.39
TRIM28-205ENST00000595028 OOEPA6NGQ2 149 aa12.6□□□□□ -0.39
TRIM28-205ENST00000595028 C3orf80F5H4A9 247 aa12.6□□□□□ -0.39
TRIM28-205ENST00000595028 EI24O14681 340 aa12.6□□□□□ -0.39
TRIM28-205ENST00000595028 CST4P01036 141 aa12.6□□□□□ -0.39
TRIM28-205ENST00000595028 EGR1P18146 543 aa12.6□□□□□ -0.39
TRIM28-205ENST00000595028 HTR1FP30939 366 aa12.6□□□□□ -0.39
TRIM28-205ENST00000595028 PSMB10P40306 273 aa12.6□□□□□ -0.39
TRIM28-205ENST00000595028 CSNK2BP67870 215 aa12.6□□□□□ -0.39
TRIM28-205ENST00000595028 IL5RAQ01344 420 aa12.6□□□□□ -0.39
TRIM28-205ENST00000595028 PAX2Q02962 417 aa12.6□□□□□ -0.39
TRIM28-205ENST00000595028 MFGE8Q08431 387 aaPredicted RBP12.6□□□□□ -0.39
TRIM28-205ENST00000595028 PRDX4Q13162 271 aa12.6□□□□□ -0.39
TRIM28-205ENST00000595028 KCNJ8Q15842 424 aa12.6□□□□□ -0.39
TRIM28-205ENST00000595028 LYPD2Q6UXB3 125 aa12.6□□□□□ -0.39
TRIM28-205ENST00000595028 OR51G2Q8NGK0 314 aa12.6□□□□□ -0.39
TRIM28-205ENST00000595028 DACT3Q96B18 629 aaPredicted RBP12.6□□□□□ -0.39
TRIM28-205ENST00000595028 MICU1Q9BPX6 476 aa12.6□□□□□ -0.39
TRIM28-205ENST00000595028 RTL8AQ9BWD3 113 aa12.6□□□□□ -0.39
TRIM28-205ENST00000595028 PBOV1Q9GZY1 135 aa12.6□□□□□ -0.39
TRIM28-205ENST00000595028 TLNRD1Q9H1K6 362 aa12.6□□□□□ -0.39
TRIM28-205ENST00000595028 MOB1AQ9H8S9 216 aa12.6□□□□□ -0.39
TRIM28-205ENST00000595028 ABCB9Q9NP78 766 aa12.6□□□□□ -0.39
TRIM28-205ENST00000595028 TRIM36Q9NQ86 728 aa12.6□□□□□ -0.39
TRIM28-205ENST00000595028 USE1Q9NZ43 259 aa12.6□□□□□ -0.39
TRIM28-205ENST00000595028 CTSZQ9UBR2 303 aa12.6□□□□□ -0.39
TRIM28-205ENST00000595028 CLN8Q9UBY8 286 aa12.6□□□□□ -0.39
TRIM28-205ENST00000595028 NUFIP1Q9UHK0 495 aaKnown RBP12.6□□□□□ -0.39
TRIM28-205ENST00000595028 A0A0A6YYJ9 748 aa12.59□□□□□ -0.39
TRIM28-205ENST00000595028 TRAV38-1A0A0B4J264 116 aa12.59□□□□□ -0.39
TRIM28-205ENST00000595028 IGHV2-70DA0A0C4DH43 119 aa12.59□□□□□ -0.39
TRIM28-205ENST00000595028 ZNF850A8MQ14 1090 aa12.59□□□□□ -0.39
TRIM28-205ENST00000595028 ZNF670-ZNF695F2Z2N8 137 aa12.59□□□□□ -0.39
TRIM28-205ENST00000595028 SRSF10O75494 262 aaKnown RBP12.59□□□□□ -0.39
TRIM28-205ENST00000595028 LHBP01229 141 aa12.59□□□□□ -0.39
TRIM28-205ENST00000595028 IGLV3-1P01715 115 aa12.59□□□□□ -0.39
TRIM28-205ENST00000595028 ALDH3A2P51648 485 aa12.59□□□□□ -0.39
TRIM28-205ENST00000595028 CDC42P60953 191 aa12.59□□□□□ -0.39
TRIM28-205ENST00000595028 EGR3Q06889 387 aa12.59□□□□□ -0.39
TRIM28-205ENST00000595028 POU4F2Q12837 409 aa12.59□□□□□ -0.39
TRIM28-205ENST00000595028 ARMCX4Q5H9R4 360 aa12.59□□□□□ -0.39
TRIM28-205ENST00000595028 WDR25Q64LD2 544 aaPredicted RBP12.59□□□□□ -0.39
TRIM28-205ENST00000595028 SFRP4Q6FHJ7 346 aaPredicted RBP12.59□□□□□ -0.39
TRIM28-205ENST00000595028 WDR82Q6UXN9 313 aa12.59□□□□□ -0.39
TRIM28-205ENST00000595028 C11orf53Q8IXP5 236 aa12.59□□□□□ -0.39
TRIM28-205ENST00000595028 GALNT4Q8N4A0 578 aa12.59□□□□□ -0.39
TRIM28-205ENST00000595028 SEMA6DQ8NFY4 1073 aa12.59□□□□□ -0.39
TRIM28-205ENST00000595028 FAM81AQ8TBF8 368 aa12.59□□□□□ -0.39
TRIM28-205ENST00000595028 LRRC29Q8WV35 223 aa12.59□□□□□ -0.39
TRIM28-205ENST00000595028 HPSE2Q8WWQ2 592 aa12.59□□□□□ -0.39
TRIM28-205ENST00000595028 MRI1Q9BV20 369 aa12.59□□□□□ -0.39
TRIM28-205ENST00000595028 RNPEPL1Q9HAU8 725 aa12.59□□□□□ -0.39
TRIM28-205ENST00000595028 GPR84Q9NQS5 396 aa12.59□□□□□ -0.39
TRIM28-205ENST00000595028 ORC6Q9Y5N6 252 aa12.59□□□□□ -0.39
TRIM28-205ENST00000595028 AUP1Q9Y679 476 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms