RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 IGHV4-38-2P0DP08 117 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 ACKR3P25106 362 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 FASP25445 335 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 EPHA2P29317 976 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 GNALP38405 381 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 CSNK2BP67870 215 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 TUSC1Q2TAM9 212 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 LCN1P1Q5VSP4 162 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 BCDIN3DQ7Z5W3 292 aaKnown RBP11.55□□□□□ -0.56
APOC1-208ENST00000592535 AMIGO2Q86SJ2 522 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 SIGLECL1Q8N7X8 197 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 CSNK2A3Q8NEV1 391 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 OR1M1Q8NGA1 313 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 OR8B12Q8NGG6 310 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 FAM216AQ8WUB2 273 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 TECTBQ96PL2 329 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 NUDT16L1Q9BRJ7 211 aaKnown RBP11.55□□□□□ -0.56
APOC1-208ENST00000592535 TTTY10Q9BZA0 68 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 NIPAL2Q9H841 368 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 COPS3Q9UNS2 423 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 AP4S1Q9Y587 144 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 IGHV3OR15-7A0A075B7D8 119 aa11.54□□□□□ -0.56
APOC1-208ENST00000592535 TRAV38-1A0A0B4J264 116 aa11.54□□□□□ -0.56
APOC1-208ENST00000592535 LHBP01229 141 aa11.54□□□□□ -0.56
APOC1-208ENST00000592535 GYPAP02724 150 aa11.54□□□□□ -0.56
APOC1-208ENST00000592535 ACTG1P63261 375 aa11.54□□□□□ -0.56
APOC1-208ENST00000592535 POU4F2Q12837 409 aa11.54□□□□□ -0.56
APOC1-208ENST00000592535 KCNJ8Q15842 424 aa11.54□□□□□ -0.56
APOC1-208ENST00000592535 SLX4IPQ5VYV7 408 aa11.54□□□□□ -0.56
APOC1-208ENST00000592535 KDM4DQ6B0I6 523 aa11.54□□□□□ -0.56
APOC1-208ENST00000592535 FAM90A1Q86YD7 464 aa11.54□□□□□ -0.56
APOC1-208ENST00000592535 TCEANCQ8N8B7 351 aa11.54□□□□□ -0.56
APOC1-208ENST00000592535 LRRC29Q8WV35 223 aa11.54□□□□□ -0.56
APOC1-208ENST00000592535 LRTOMTQ8WZ04 291 aa11.54□□□□□ -0.56
APOC1-208ENST00000592535 UPRTQ96BW1 309 aa11.54□□□□□ -0.56
APOC1-208ENST00000592535 ITPKCQ96DU7 683 aa11.54□□□□□ -0.56
APOC1-208ENST00000592535 DUS3LQ96G46 650 aaKnown RBP11.54□□□□□ -0.56
APOC1-208ENST00000592535 ZNF48Q96MX3 618 aaPredicted RBP11.54□□□□□ -0.56
APOC1-208ENST00000592535 PRRG3Q9BZD7 231 aa11.54□□□□□ -0.56
APOC1-208ENST00000592535 GABARAPL1Q9H0R8 117 aa11.54□□□□□ -0.56
APOC1-208ENST00000592535 RASSF4Q9H2L5 321 aa11.54□□□□□ -0.56
APOC1-208ENST00000592535 RNPEPL1Q9HAU8 725 aa11.54□□□□□ -0.56
APOC1-208ENST00000592535 SMURF1Q9HCE7 757 aa11.54□□□□□ -0.56
APOC1-208ENST00000592535 TRIM36Q9NQ86 728 aa11.54□□□□□ -0.56
APOC1-208ENST00000592535 ERVK-18Q9QC07 812 aa11.54□□□□□ -0.56
APOC1-208ENST00000592535 TRAV40A0A0B4J280 105 aa11.53□□□□□ -0.56
APOC1-208ENST00000592535 ANXA2P2A6NMY6 339 aa11.53□□□□□ -0.56
APOC1-208ENST00000592535 ZAR1LA6NP61 321 aa11.53□□□□□ -0.56
APOC1-208ENST00000592535 ZNF850A8MQ14 1090 aa11.53□□□□□ -0.56
APOC1-208ENST00000592535 HAX1O00165 279 aa11.53□□□□□ -0.56
APOC1-208ENST00000592535 FCN3O75636 299 aa11.53□□□□□ -0.56
APOC1-208ENST00000592535 PPIAL4GP0DN37 164 aa11.53□□□□□ -0.56
APOC1-208ENST00000592535 NPY4RP50391 375 aa11.53□□□□□ -0.56
APOC1-208ENST00000592535 UBA52P62987 128 aaKnown RBP11.53□□□□□ -0.56
APOC1-208ENST00000592535 EFNB1P98172 346 aa11.53□□□□□ -0.56
APOC1-208ENST00000592535 PRDX4Q13162 271 aa11.53□□□□□ -0.56
APOC1-208ENST00000592535 SNCBQ16143 134 aa11.53□□□□□ -0.56
APOC1-208ENST00000592535 TEX36Q5VZQ5 186 aa11.53□□□□□ -0.56
APOC1-208ENST00000592535 C12orf73Q69YU5 71 aa11.53□□□□□ -0.56
APOC1-208ENST00000592535 KCTD18Q6PI47 426 aaPredicted RBP11.53□□□□□ -0.56
APOC1-208ENST00000592535 WDR82Q6UXN9 313 aa11.53□□□□□ -0.56
APOC1-208ENST00000592535 C12orf54Q6X4T0 127 aa11.53□□□□□ -0.56
APOC1-208ENST00000592535 DOK3Q7L591 496 aa11.53□□□□□ -0.56
APOC1-208ENST00000592535 ZDHHC13Q8IUH4 622 aa11.53□□□□□ -0.56
APOC1-208ENST00000592535 GALNT4Q8N4A0 578 aa11.53□□□□□ -0.56
APOC1-208ENST00000592535 FTMTQ8N4E7 242 aa11.53□□□□□ -0.56
APOC1-208ENST00000592535 TMEM163Q8TC26 289 aa11.53□□□□□ -0.56
APOC1-208ENST00000592535 PIGCQ92535 297 aa11.53□□□□□ -0.56
APOC1-208ENST00000592535 OR8B4Q96RC9 309 aa11.53□□□□□ -0.56
APOC1-208ENST00000592535 CNN2Q99439 309 aaKnown RBP11.53□□□□□ -0.56
APOC1-208ENST00000592535 MICU1Q9BPX6 476 aa11.53□□□□□ -0.56
APOC1-208ENST00000592535 FGF23Q9GZV9 251 aaPredicted RBP11.53□□□□□ -0.56
APOC1-208ENST00000592535 MS4A7Q9GZW8 240 aaPredicted RBP11.53□□□□□ -0.56
APOC1-208ENST00000592535 FAM206AQ9NX38 181 aa11.53□□□□□ -0.56
APOC1-208ENST00000592535 MPC1Q9Y5U8 109 aa11.53□□□□□ -0.56
APOC1-208ENST00000592535 SOX21Q9Y651 276 aaPredicted RBP11.53□□□□□ -0.56
APOC1-208ENST00000592535 FBN3Q75N90 2809 aa11.52□□□□□ -0.56
APOC1-208ENST00000592535 TMEM269A0A1B0GVZ9 245 aa11.52□□□□□ -0.57
APOC1-208ENST00000592535 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.52□□□□□ -0.57
APOC1-208ENST00000592535 CDIPTO14735 213 aa11.52□□□□□ -0.57
APOC1-208ENST00000592535 NDUFA2O43678 99 aa11.52□□□□□ -0.57
APOC1-208ENST00000592535 ENSAO43768 121 aaKnown RBP11.52□□□□□ -0.57
APOC1-208ENST00000592535 PLATP00750 562 aa11.52□□□□□ -0.57
APOC1-208ENST00000592535 CST4P01036 141 aa11.52□□□□□ -0.57
APOC1-208ENST00000592535 FCGR1AP12314 374 aa11.52□□□□□ -0.57
APOC1-208ENST00000592535 FGF12P61328 243 aa11.52□□□□□ -0.57
APOC1-208ENST00000592535 ELF3P78545 371 aaPredicted RBP11.52□□□□□ -0.57
APOC1-208ENST00000592535 IL5RAQ01344 420 aa11.52□□□□□ -0.57
APOC1-208ENST00000592535 ROM1Q03395 351 aa11.52□□□□□ -0.57
APOC1-208ENST00000592535 AADACL4Q5VUY2 407 aa11.52□□□□□ -0.57
APOC1-208ENST00000592535 NXNL2Q5VZ03 156 aa11.52□□□□□ -0.57
APOC1-208ENST00000592535 DEGS2Q6QHC5 323 aa11.52□□□□□ -0.57
APOC1-208ENST00000592535 RBMS3Q6XE24 437 aaKnown RBP11.52□□□□□ -0.57
APOC1-208ENST00000592535 MEPCEQ7L2J0 689 aaKnown RBP11.52□□□□□ -0.57
APOC1-208ENST00000592535 OR5P3Q8WZ94 311 aa11.52□□□□□ -0.57
APOC1-208ENST00000592535 GCDHQ92947 438 aaPredicted RBP11.52□□□□□ -0.57
APOC1-208ENST00000592535 SEH1LQ96EE3 360 aa11.52□□□□□ -0.57
APOC1-208ENST00000592535 DUX5Q96PT3 197 aa11.52□□□□□ -0.57
APOC1-208ENST00000592535 IL4I1Q96RQ9 567 aa11.52□□□□□ -0.57
APOC1-208ENST00000592535 CIB1Q99828 191 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms