RNA–Protein interactions for RNA: ENST00000592076.5

TMC6-222, Transcript of transmembrane channel like 6, human

TSL 3

Gene TMC6, Length 693 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-222	ENST00000592076	TRAV38-1	A0A0B4J264	116 aa		13.62	□□□□□ -0.23
TMC6-222	ENST00000592076		A8MXK9	166 aa		13.62	□□□□□ -0.23
TMC6-222	ENST00000592076	LGALS8	O00214	317 aa		13.62	□□□□□ -0.23
TMC6-222	ENST00000592076	EI24	O14681	340 aa		13.62	□□□□□ -0.23
TMC6-222	ENST00000592076	PTBP3	O95758	552 aa	Known RBP	13.62	□□□□□ -0.23
TMC6-222	ENST00000592076	WNT2	P09544	360 aa		13.62	□□□□□ -0.23
TMC6-222	ENST00000592076	ZFP36	P26651	326 aa	Known RBP	13.62	□□□□□ -0.23
TMC6-222	ENST00000592076	DCTD	P32321	178 aa		13.62	□□□□□ -0.23
TMC6-222	ENST00000592076	MAP2K3	P46734	347 aa		13.62	□□□□□ -0.23
TMC6-222	ENST00000592076	PITPNB	P48739	271 aa		13.62	□□□□□ -0.23
TMC6-222	ENST00000592076	ROM1	Q03395	351 aa		13.62	□□□□□ -0.23
TMC6-222	ENST00000592076	BTNL3	Q6UXE8	466 aa		13.62	□□□□□ -0.23
TMC6-222	ENST00000592076	THAP5	Q7Z6K1	395 aa		13.62	□□□□□ -0.23
TMC6-222	ENST00000592076	MOB1A	Q9H8S9	216 aa		13.62	□□□□□ -0.23
TMC6-222	ENST00000592076	CLN6	Q9NWW5	311 aa		13.62	□□□□□ -0.23
TMC6-222	ENST00000592076	HAO2	Q9NYQ3	351 aa		13.62	□□□□□ -0.23
TMC6-222	ENST00000592076	CLN8	Q9UBY8	286 aa		13.62	□□□□□ -0.23
TMC6-222	ENST00000592076	COPS3	Q9UNS2	423 aa		13.62	□□□□□ -0.23
TMC6-222	ENST00000592076	RHBDD3	Q9Y3P4	386 aa		13.62	□□□□□ -0.23
TMC6-222	ENST00000592076	C3orf80	F5H4A9	247 aa		13.61	□□□□□ -0.23
TMC6-222	ENST00000592076	LOC110117498-PIK3R3	F6TDL0	507 aa		13.61	□□□□□ -0.23
TMC6-222	ENST00000592076		H3BNX3	289 aa		13.61	□□□□□ -0.23
TMC6-222	ENST00000592076	KRT8	P05787	483 aa		13.61	□□□□□ -0.23
TMC6-222	ENST00000592076	EPHA1	P21709	976 aa		13.61	□□□□□ -0.23
TMC6-222	ENST00000592076	HTR1F	P30939	366 aa		13.61	□□□□□ -0.23
TMC6-222	ENST00000592076	CD80	P33681	288 aa		13.61	□□□□□ -0.23
TMC6-222	ENST00000592076	POLR2I	P36954	125 aa	Known RBP	13.61	□□□□□ -0.23
TMC6-222	ENST00000592076	ALDH3A2	P51648	485 aa		13.61	□□□□□ -0.23
TMC6-222	ENST00000592076	EFNB1	P98172	346 aa		13.61	□□□□□ -0.23
TMC6-222	ENST00000592076	EGR3	Q06889	387 aa		13.61	□□□□□ -0.23
TMC6-222	ENST00000592076	PRDX4	Q13162	271 aa		13.61	□□□□□ -0.23
TMC6-222	ENST00000592076	ARMCX4	Q5H9R4	360 aa		13.61	□□□□□ -0.23
TMC6-222	ENST00000592076	SFRP4	Q6FHJ7	346 aa	Predicted RBP	13.61	□□□□□ -0.23
TMC6-222	ENST00000592076	KCTD8	Q6ZWB6	473 aa		13.61	□□□□□ -0.23
TMC6-222	ENST00000592076	C1QL2	Q7Z5L3	287 aa		13.61	□□□□□ -0.23
TMC6-222	ENST00000592076	ZDHHC23	Q8IYP9	409 aa		13.61	□□□□□ -0.23
TMC6-222	ENST00000592076	C19orf18	Q8NEA5	215 aa		13.61	□□□□□ -0.23
TMC6-222	ENST00000592076	ZNF418	Q8TF45	676 aa	Predicted RBP	13.61	□□□□□ -0.23
TMC6-222	ENST00000592076	PIGC	Q92535	297 aa		13.61	□□□□□ -0.23
TMC6-222	ENST00000592076	STMN2	Q93045	179 aa		13.61	□□□□□ -0.23
TMC6-222	ENST00000592076	ITFG2	Q969R8	447 aa		13.61	□□□□□ -0.23
TMC6-222	ENST00000592076	TBX5	Q99593	518 aa		13.61	□□□□□ -0.23
TMC6-222	ENST00000592076	PBOV1	Q9GZY1	135 aa		13.61	□□□□□ -0.23
TMC6-222	ENST00000592076	FAM206A	Q9NX38	181 aa		13.61	□□□□□ -0.23
TMC6-222	ENST00000592076	USE1	Q9NZ43	259 aa		13.61	□□□□□ -0.23
TMC6-222	ENST00000592076		A0A0U1RQV5	110 aa		13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	ZNF816-ZNF321P	A0A0X1KG74	233 aa		13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	OOEP	A6NGQ2	149 aa		13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	TMEM210	A6NLX4	147 aa		13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	ZNF850	A8MQ14	1090 aa		13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	MTRF1	O75570	445 aa	Known RBP	13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	ALPL	P05186	524 aa		13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	ATP6V1B1	P15313	513 aa		13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	ADRA2C	P18825	462 aa		13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	ZNF154	Q13106	437 aa		13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	TMED1	Q13445	227 aa		13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	BCL2L15	Q5TBC7	163 aa		13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	ZNF826P	Q6ZT77	177 aa		13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	CBR4	Q8N4T8	237 aa		13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	SEMA6D	Q8NFY4	1073 aa		13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	OR1M1	Q8NGA1	313 aa		13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	OR10H4	Q8NGA5	316 aa		13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	LRRC29	Q8WV35	223 aa		13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	FAM71F1	Q96KD3	344 aa	Predicted RBP	13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	TECTB	Q96PL2	329 aa		13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	C9orf16	Q9BUW7	83 aa		13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	RNPEPL1	Q9HAU8	725 aa		13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	S100A14	Q9HCY8	104 aa		13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	GPR84	Q9NQS5	396 aa		13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	MMP26	Q9NRE1	261 aa		13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	ERVK-18	Q9QC07	812 aa		13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	INSIG2	Q9Y5U4	225 aa		13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	AUP1	Q9Y679	476 aa		13.6	□□□□□ -0.23
TMC6-222	ENST00000592076	SNTN	A6NMZ2	147 aa		13.59	□□□□□ -0.23
TMC6-222	ENST00000592076	ADAM20	O43506	726 aa		13.59	□□□□□ -0.23
TMC6-222	ENST00000592076	NDUFA2	O43678	99 aa		13.59	□□□□□ -0.23
TMC6-222	ENST00000592076	CST4	P01036	141 aa		13.59	□□□□□ -0.23
TMC6-222	ENST00000592076	AVP	P01185	164 aa		13.59	□□□□□ -0.23
TMC6-222	ENST00000592076	OR2T7	P0C7T2	308 aa		13.59	□□□□□ -0.23
TMC6-222	ENST00000592076	ZNF12	P17014	697 aa		13.59	□□□□□ -0.23
TMC6-222	ENST00000592076	ACKR3	P25106	362 aa		13.59	□□□□□ -0.23
TMC6-222	ENST00000592076	NPY4R	P50391	375 aa		13.59	□□□□□ -0.23
TMC6-222	ENST00000592076	ZIK1	Q3SY52	487 aa	Predicted RBP	13.59	□□□□□ -0.23
TMC6-222	ENST00000592076	FAM220A	Q7Z4H9	259 aa		13.59	□□□□□ -0.23
TMC6-222	ENST00000592076	GALNT4	Q8N4A0	578 aa		13.59	□□□□□ -0.23
TMC6-222	ENST00000592076	BPIFB2	Q8N4F0	458 aa		13.59	□□□□□ -0.23
TMC6-222	ENST00000592076	YIPF7	Q8N8F6	280 aa		13.59	□□□□□ -0.23
TMC6-222	ENST00000592076	OR2T27	Q8NH04	317 aa		13.59	□□□□□ -0.23
TMC6-222	ENST00000592076	TRUB1	Q8WWH5	349 aa	Known RBP	13.59	□□□□□ -0.23
TMC6-222	ENST00000592076	ITPKC	Q96DU7	683 aa		13.59	□□□□□ -0.23
TMC6-222	ENST00000592076	RNF170	Q96K19	258 aa		13.59	□□□□□ -0.23
TMC6-222	ENST00000592076	LYZL4	Q96KX0	146 aa		13.59	□□□□□ -0.23
TMC6-222	ENST00000592076	APOL4	Q9BPW4	351 aa		13.59	□□□□□ -0.23
TMC6-222	ENST00000592076	NUFIP1	Q9UHK0	495 aa	Known RBP	13.59	□□□□□ -0.23
TMC6-222	ENST00000592076	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	13.59	□□□□□ -0.23	7e-9	■■■□□ 19
TMC6-222	ENST00000592076		R4GMQ9	66 aa		13.59	□□□□□ -0.23
TMC6-222	ENST00000592076	PRR32	B1ATL7	298 aa		13.58	□□□□□ -0.24
TMC6-222	ENST00000592076	TRAPPC2L	H3BP13	241 aa		13.58	□□□□□ -0.24
TMC6-222	ENST00000592076	BAG2	O95816	211 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms