RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 ALKBH3Q96Q83 286 aaPredicted RBP13.79□□□□□ -0.2
MBD1-227ENST00000592060 GPER1Q99527 375 aa13.79□□□□□ -0.2
MBD1-227ENST00000592060 PRRT1Q99946 306 aa13.79□□□□□ -0.2
MBD1-227ENST00000592060 FAM173AQ9BQD7 235 aa13.79□□□□□ -0.2
MBD1-227ENST00000592060 BANF2Q9H503 90 aa13.79□□□□□ -0.2
MBD1-227ENST00000592060 ZNF703Q9H7S9 590 aaPredicted RBP13.79□□□□□ -0.2
MBD1-227ENST00000592060 IFT46Q9NQC8 304 aa13.79□□□□□ -0.2
MBD1-227ENST00000592060 B3GNT2Q9NY97 397 aa13.79□□□□□ -0.2
MBD1-227ENST00000592060 VSIG4Q9Y279 399 aa13.79□□□□□ -0.2
MBD1-227ENST00000592060 NAT2P11245 290 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 HIST1H1DP16402 221 aaKnown RBP13.78□□□□□ -0.2
MBD1-227ENST00000592060 NAT1P18440 290 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 CXCL2P19875 107 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 TMEM50BP56557 158 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 HGFACQ04756 655 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 NKPD1Q17RQ9 610 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 SCGB2B2Q4G0G5 96 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 RIPPLY2Q5TAB7 128 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 TMEM164Q5U3C3 297 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 DRAM2Q6UX65 266 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 TNFAIP8L1Q8WVP5 186 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 CPNE4Q96A23 557 aaPredicted RBP13.78□□□□□ -0.2
MBD1-227ENST00000592060 ZNF845Q96IR2 970 aaPredicted RBP13.78□□□□□ -0.2
MBD1-227ENST00000592060 OR10A2Q9H208 303 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 R4GN57 208 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 OR6C6A6NF89 314 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 FOXI3A8MTJ6 420 aaPredicted RBP13.78□□□□□ -0.2
MBD1-227ENST00000592060 F5H5P2 479 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 MFNGO00587 321 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 SLC22A5O76082 557 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 CSN2P05814 226 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 TBPP20226 339 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 AVPR2P30518 371 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 GNG2P59768 71 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 RSPO4Q2I0M5 234 aaPredicted RBP13.78□□□□□ -0.2
MBD1-227ENST00000592060 SFRP5Q5T4F7 317 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 ZNF774Q6NX45 483 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 C1QL2Q7Z5L3 287 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 TMED4Q7Z7H5 227 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 CD163Q86VB7 1156 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 FAM89BQ8N5H3 189 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 OR52H1Q8NGJ2 320 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 SGK3Q96BR1 496 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 RAB3CQ96E17 227 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 DPCDQ9BVM2 203 aaPredicted RBP13.78□□□□□ -0.2
MBD1-227ENST00000592060 GHRLQ9UBU3 117 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 PIGLQ9Y2B2 252 aa13.78□□□□□ -0.2
MBD1-227ENST00000592060 LINC01387J3KSC0 135 aa13.77□□□□□ -0.21
MBD1-227ENST00000592060 CRTAPO75718 401 aaPredicted RBP13.77□□□□□ -0.21
MBD1-227ENST00000592060 RAD51DO75771 328 aa13.77□□□□□ -0.21
MBD1-227ENST00000592060 RGS11O94810 467 aa13.77□□□□□ -0.21
MBD1-227ENST00000592060 HPNP05981 417 aa13.77□□□□□ -0.21
MBD1-227ENST00000592060 B4GALT1P15291 398 aa13.77□□□□□ -0.21
MBD1-227ENST00000592060 HRH1P35367 487 aa13.77□□□□□ -0.21
MBD1-227ENST00000592060 PTGFRP43088 359 aa13.77□□□□□ -0.21
MBD1-227ENST00000592060 RPS27AP62979 156 aaKnown RBP13.77□□□□□ -0.21
MBD1-227ENST00000592060 CXADRP78310 365 aa13.77□□□□□ -0.21
MBD1-227ENST00000592060 SCRN3Q0VDG4 424 aa13.77□□□□□ -0.21
MBD1-227ENST00000592060 GRK1Q15835 563 aa13.77□□□□□ -0.21
MBD1-227ENST00000592060 DMRTC1Q5HYR2 192 aa13.77□□□□□ -0.21
MBD1-227ENST00000592060 DCAF10Q5QP82 559 aa13.77□□□□□ -0.21
MBD1-227ENST00000592060 ABHD17BQ5VST6 288 aa13.77□□□□□ -0.21
MBD1-227ENST00000592060 C17orf107Q6ZR85 190 aa13.77□□□□□ -0.21
MBD1-227ENST00000592060 C12orf45Q8N5I9 185 aaPredicted RBP13.77□□□□□ -0.21
MBD1-227ENST00000592060 ZDHHC22Q8N966 263 aa13.77□□□□□ -0.21
MBD1-227ENST00000592060 PNLDC1Q8NA58 520 aaKnown RBP13.77□□□□□ -0.21
MBD1-227ENST00000592060 OR56B1Q8NGI3 324 aa13.77□□□□□ -0.21
MBD1-227ENST00000592060 OR1F12Q8NHA8 337 aa13.77□□□□□ -0.21
MBD1-227ENST00000592060 NPRL2Q8WTW4 380 aa13.77□□□□□ -0.21
MBD1-227ENST00000592060 ABHD3Q8WU67 409 aa13.77□□□□□ -0.21
MBD1-227ENST00000592060 ASB13Q8WXK3 278 aa13.77□□□□□ -0.21
MBD1-227ENST00000592060 TMEM45BQ96B21 275 aa13.77□□□□□ -0.21
MBD1-227ENST00000592060 CYYR1Q96J86 154 aa13.77□□□□□ -0.21
MBD1-227ENST00000592060 HES7Q9BYE0 225 aa13.77□□□□□ -0.21
MBD1-227ENST00000592060 GPR35Q9HC97 309 aa13.77□□□□□ -0.21
MBD1-227ENST00000592060 PLEKHA6Q9Y2H5 1048 aa13.77□□□□□ -0.21
MBD1-227ENST00000592060 DHRS7CA6NNS2 312 aa13.76□□□□□ -0.21
MBD1-227ENST00000592060 MTRF1O75570 445 aaKnown RBP13.76□□□□□ -0.21
MBD1-227ENST00000592060 ZNF32P17041 273 aa13.76□□□□□ -0.21
MBD1-227ENST00000592060 LHX2P50458 406 aa13.76□□□□□ -0.21
MBD1-227ENST00000592060 FAM189A2Q15884 450 aa13.76□□□□□ -0.21
MBD1-227ENST00000592060 PNLIPRP3Q17RR3 467 aa13.76□□□□□ -0.21
MBD1-227ENST00000592060 CEACAM16Q2WEN9 425 aa13.76□□□□□ -0.21
MBD1-227ENST00000592060 LY6G6FQ5SQ64 297 aa13.76□□□□□ -0.21
MBD1-227ENST00000592060 DHRS13Q6UX07 377 aa13.76□□□□□ -0.21
MBD1-227ENST00000592060 OR5D18Q8NGL1 313 aa13.76□□□□□ -0.21
MBD1-227ENST00000592060 ELMOD3Q96FG2 381 aa13.76□□□□□ -0.21
MBD1-227ENST00000592060 FOXB1Q99853 325 aa13.76□□□□□ -0.21
MBD1-227ENST00000592060 URM1Q9BTM9 101 aaKnown RBP13.76□□□□□ -0.21
MBD1-227ENST00000592060 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.76□□□□□ -0.21
MBD1-227ENST00000592060 GPR179Q6PRD1 2367 aa13.76□□□□□ -0.21
MBD1-227ENST00000592060 MCRIP1C9JLW8 97 aa13.76□□□□□ -0.21
MBD1-227ENST00000592060 STMND1H3BQB6 276 aa13.76□□□□□ -0.21
MBD1-227ENST00000592060 CELA3AP09093 270 aa13.76□□□□□ -0.21
MBD1-227ENST00000592060 ACKR3P25106 362 aa13.76□□□□□ -0.21
MBD1-227ENST00000592060 DHRS2Q13268 280 aa13.76□□□□□ -0.21
MBD1-227ENST00000592060 EXOSC2Q13868 293 aaKnown RBP13.76□□□□□ -0.21
MBD1-227ENST00000592060 OPCMLQ14982 345 aa13.76□□□□□ -0.21
MBD1-227ENST00000592060 SLC16A14Q7RTX9 510 aa13.76□□□□□ -0.21
MBD1-227ENST00000592060 SLC25A42Q86VD7 318 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms