RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 LRP12Q9Y561 859 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 N6AMT1Q9Y5N5 214 aa9.4□□□□□ -0.9
SMAD4-211ENST00000590499 SLC22A31A6NKX4 558 aa9.39□□□□□ -0.91
SMAD4-211ENST00000590499 TBX1O43435 398 aa9.39□□□□□ -0.91
SMAD4-211ENST00000590499 CYB5R3P00387 301 aaPredicted RBP9.39□□□□□ -0.91
SMAD4-211ENST00000590499 IFNA2P01563 188 aa9.39□□□□□ -0.91
SMAD4-211ENST00000590499 SBK2P0C263 348 aa9.39□□□□□ -0.91
SMAD4-211ENST00000590499 ANPEPP15144 967 aa9.39□□□□□ -0.91
SMAD4-211ENST00000590499 ZFP36P26651 326 aaKnown RBP9.39□□□□□ -0.91
SMAD4-211ENST00000590499 MDH2P40926 338 aaKnown RBP9.39□□□□□ -0.91
SMAD4-211ENST00000590499 OR8G1Q15617 311 aa9.39□□□□□ -0.91
SMAD4-211ENST00000590499 OR8B8Q15620 311 aa9.39□□□□□ -0.91
SMAD4-211ENST00000590499 MPPED2Q15777 294 aa9.39□□□□□ -0.91
SMAD4-211ENST00000590499 PRAMEF6Q5VXH4 476 aa9.39□□□□□ -0.91
SMAD4-211ENST00000590499 ZNF771Q7L3S4 317 aaPredicted RBP9.39□□□□□ -0.91
SMAD4-211ENST00000590499 KLBQ86Z14 1044 aa9.39□□□□□ -0.91
SMAD4-211ENST00000590499 OR8B12Q8NGG6 310 aa9.39□□□□□ -0.91
SMAD4-211ENST00000590499 DVL3Q92997 716 aaPredicted RBP9.39□□□□□ -0.91
SMAD4-211ENST00000590499 OR8B4Q96RC9 309 aa9.39□□□□□ -0.91
SMAD4-211ENST00000590499 IL4I1Q96RQ9 567 aa9.39□□□□□ -0.91
SMAD4-211ENST00000590499 CNN2Q99439 309 aaKnown RBP9.39□□□□□ -0.91
SMAD4-211ENST00000590499 OR10A2Q9H208 303 aa9.39□□□□□ -0.91
SMAD4-211ENST00000590499 NIPAL2Q9H841 368 aa9.39□□□□□ -0.91
SMAD4-211ENST00000590499 PATZ1Q9HBE1 687 aaKnown RBP9.39□□□□□ -0.91
SMAD4-211ENST00000590499 TMEM165Q9HC07 324 aa9.39□□□□□ -0.91
SMAD4-211ENST00000590499 UBAP1Q9NZ09 502 aa9.39□□□□□ -0.91
SMAD4-211ENST00000590499 USE1Q9NZ43 259 aa9.39□□□□□ -0.91
SMAD4-211ENST00000590499 LAMP5Q9UJQ1 280 aa9.39□□□□□ -0.91
SMAD4-211ENST00000590499 POLR3KQ9Y2Y1 108 aaPredicted RBP9.39□□□□□ -0.91
SMAD4-211ENST00000590499 ANK2Q01484 3957 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 PPIAL4EA0A075B759 164 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 PPIAL4CA0A0B4J2A2 164 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 CEACAM18A8MTB9 384 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 A8MXK9 166 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 PPIAL4DF5H284 164 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 EI24O14681 340 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 FAM20BO75063 409 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 PNPP00491 289 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 PPIAL4FP0DN26 164 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 CFL1P23528 166 aaKnown RBP9.38□□□□□ -0.91
SMAD4-211ENST00000590499 ACKR3P25106 362 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 DCTDP32321 178 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 SEC61A1P61619 476 aaKnown RBP9.38□□□□□ -0.91
SMAD4-211ENST00000590499 ZNF404Q494X3 552 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 FAM201AQ5SY85 155 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 KRT74Q7RTS7 529 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 KRT77Q7Z794 578 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 WDR86Q86TI4 376 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-211ENST00000590499 GID4Q8IVV7 300 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 ZNF679Q8IYX0 411 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 C1orf87Q8N0U7 546 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 MUC20Q8N307 709 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-211ENST00000590499 KLHL36Q8N4N3 616 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 SPERTQ8NA61 448 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 ASB17Q8WXJ9 295 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 PGAM5Q96HS1 289 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 LYZL4Q96KX0 146 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 RIBC2Q9H4K1 309 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 FAM206AQ9NX38 181 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 TMEM14AQ9Y6G1 99 aa9.38□□□□□ -0.91
SMAD4-211ENST00000590499 A0A0G2JMP0 313 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 A0A0X1KG70 313 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 ACOD1A6NK06 481 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 LRRC30A6NM36 301 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 ANKRD30BLA7E2S9 258 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 PSMD9O00233 223 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 ZNF254O75437 659 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 SRSF10O75494 262 aaKnown RBP9.37□□□□□ -0.91
SMAD4-211ENST00000590499 FOXH1O75593 365 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 ZNF205O95201 554 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 IGLV3-1P01715 115 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 WNT2P09544 360 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 CPT2P23786 658 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 HTR1FP30939 366 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 ALDH3A2P51648 485 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 LCN2P80188 198 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 HOXA4Q00056 320 aaPredicted RBP9.37□□□□□ -0.91
SMAD4-211ENST00000590499 GFOD2Q3B7J2 385 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 KCTD18Q6PI47 426 aaPredicted RBP9.37□□□□□ -0.91
SMAD4-211ENST00000590499 SLC35F2Q8IXU6 374 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 CSNK2A3Q8NEV1 391 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 OR4M2Q8NGB6 313 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 OR8J1Q8NGP2 316 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 HRASLS5Q96KN8 279 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 MNTQ99583 582 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 TMEM246Q9BRR3 403 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 MROQ9BYG7 248 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 PPP1R3EQ9H7J1 279 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 S100A14Q9HCY8 104 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 UFSP2Q9NUQ7 469 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 CLN6Q9NWW5 311 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.37□□□□□ -0.91
SMAD4-211ENST00000590499 ZNF391Q9UJN7 358 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 RHBDD3Q9Y3P4 386 aa9.37□□□□□ -0.91
SMAD4-211ENST00000590499 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.37□□□□□ -0.91
SMAD4-211ENST00000590499 A0A0U1RQV5 110 aa9.36□□□□□ -0.91
SMAD4-211ENST00000590499 TMEM269A0A1B0GVZ9 245 aa9.36□□□□□ -0.91
SMAD4-211ENST00000590499 J3QLI3 93 aa9.36□□□□□ -0.91
SMAD4-211ENST00000590499 GATA3P23771 443 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms