RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 ENKURQ8TC29 256 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 RNF128Q8TEB7 428 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 DPF1Q92782 380 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 UPRTQ96BW1 309 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 MOAP1Q96BY2 351 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 RNFT2Q96EX2 444 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 RADILQ96JH8 1075 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 SLC35G5Q96KT7 338 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 KLHDC3Q9BQ90 382 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 SRXN1Q9BYN0 137 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 RPRD1BQ9NQG5 326 aaKnown RBP6.58□□□□□ -1.36
SMAD4-209ENST00000589941 CYSLTR2Q9NS75 346 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 TVP23BQ9NYZ1 205 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 KLHL13Q9P2N7 655 aa6.58□□□□□ -1.36
SMAD4-209ENST00000589941 ELF5Q9UKW6 265 aaPredicted RBP6.58□□□□□ -1.36
SMAD4-209ENST00000589941 A0A087WUU8 490 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 A0A0J9YW62 118 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 ANKDD1BA6NHY2 528 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 OR5H1A6NKK0 313 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 H3BN98 237 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 GABRPO00591 440 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 SPRY2O43597 315 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 TMPRSS11DO60235 418 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 RAD51DO75771 328 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 LALBAP00709 142 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 GBAP04062 536 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 CHRM4P08173 479 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 SLC2A2P11168 524 aaPredicted RBP6.57□□□□□ -1.36
SMAD4-209ENST00000589941 ARSBP15848 533 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 NAGAP17050 411 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 HTR1FP30939 366 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 BTCP35070 178 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 IFNGR2P38484 337 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 OR3A3P47888 321 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 RFX3P48380 749 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 CCT3P49368 545 aaKnown RBP6.57□□□□□ -1.36
SMAD4-209ENST00000589941 AP2S1P53680 142 aaPredicted RBP6.57□□□□□ -1.36
SMAD4-209ENST00000589941 FOXG1P55316 489 aaPredicted RBP6.57□□□□□ -1.36
SMAD4-209ENST00000589941 SNRPD2P62316 118 aaKnown RBP6.57□□□□□ -1.36
SMAD4-209ENST00000589941 ZP4Q12836 540 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 FHL3Q13643 280 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 GNA13Q14344 377 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 TRAM2Q15035 370 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 ZNF239Q16600 458 aaKnown RBP6.57□□□□□ -1.36
SMAD4-209ENST00000589941 TIMM23BQ5SRD1 257 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 OR2G6Q5TZ20 316 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 TRIQKQ629K1 86 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 TMEM91Q6ZNR0 172 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 Q6ZT83 130 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 BCDIN3DQ7Z5W3 292 aaKnown RBP6.57□□□□□ -1.36
SMAD4-209ENST00000589941 LRRC28Q86X40 367 aaPredicted RBP6.57□□□□□ -1.36
SMAD4-209ENST00000589941 NUDT13Q86X67 352 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 Q8N402 240 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 C9orf62Q8N4C0 152 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 IQCF1Q8N6M8 205 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 KIR3DL3Q8N743 410 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 C11orf44Q8N8P7 122 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 TTLQ8NG68 377 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 OR6T1Q8NGN1 323 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 HAVCR2Q8TDQ0 301 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 HYLS1Q96M11 299 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 AMDHD1Q96NU7 426 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 SLC38A2Q96QD8 506 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 PELOQ9BRX2 385 aaKnown RBP6.57□□□□□ -1.36
SMAD4-209ENST00000589941 FNDC11Q9BVV2 318 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 OR51I1Q9H343 314 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 GHITMQ9H3K2 345 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 FN3KQ9H479 309 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 PIGUQ9H490 435 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 IL20Q9NYY1 176 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 TREM2Q9NZC2 230 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 MCTS1Q9ULC4 181 aaKnown RBP6.57□□□□□ -1.36
SMAD4-209ENST00000589941 SLC25A15Q9Y619 301 aa6.57□□□□□ -1.36
SMAD4-209ENST00000589941 OR6C70A6NIJ9 312 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 M0R3H8 397 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 GTPBP1O00178 669 aaKnown RBP6.56□□□□□ -1.36
SMAD4-209ENST00000589941 PSMD9O00233 223 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 PGRMC2O15173 223 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 SURF4O15260 269 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 TSPAN2O60636 221 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 HPGDSO60760 199 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 REM1O75628 298 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 SC5DO75845 299 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 OR5F1O95221 314 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 SYNGR4O95473 234 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 SLC35E2P0CK97 266 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 PTAFRP25105 342 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 HTR2BP41595 481 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 CAPZA2P47755 286 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 ATP12AP54707 1039 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 P2RY14Q15391 338 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 TRAM1Q15629 374 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 SNAPC1Q16533 368 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 SYPL1Q16563 259 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 TMEM35AQ53FP2 167 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 ESCO2Q56NI9 601 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 HBMQ6B0K9 141 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 ZNF322Q6U7Q0 402 aaPredicted RBP6.56□□□□□ -1.36
SMAD4-209ENST00000589941 NPSR1Q6W5P4 371 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 ZNF620Q6ZNG0 422 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms