RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 PDZD9Q8IXQ8 264 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 PAQR4Q8N4S7 273 aaPredicted RBP6.53□□□□□ -1.36
ZNF540-206ENST00000589117 INO80EQ8NBZ0 244 aaPredicted RBP6.53□□□□□ -1.36
ZNF540-206ENST00000589117 OR5M8Q8NGP6 311 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 OR6K3Q8NGY3 331 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 PP6455Q8WZ26 134 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 RBPMSQ93062 196 aaKnown RBP6.53□□□□□ -1.36
ZNF540-206ENST00000589117 SPTSSAQ969W0 71 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 SGCZQ96LD1 299 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 SLC6A7Q99884 636 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 PIGQQ9BRB3 760 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 TMEM59Q9BXS4 323 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 ANGPTL4Q9BY76 406 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 CHST6Q9GZX3 395 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 NELFAQ9H3P2 528 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 ZMAT4Q9H898 229 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 ZNF160Q9HCG1 818 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 GPR84Q9NQS5 396 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 OCIAD1Q9NX40 245 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 TUBD1Q9UJT1 453 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 DKKL1Q9UK85 242 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 KLK13Q9UKR3 277 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 U3KQA8 63 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 KIF26BQ2KJY2 2108 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 ASXL3Q9C0F0 2248 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 NSG1A0A0A6YYJ2 146 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 A0A1B0GTI1 187 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 KRBOX1C9JBD0 128 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 RER1O15258 196 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 LMX1BO60663 402 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 CD8AP01732 235 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 ZNF735P0CB33 412 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 MGMTP16455 207 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 ZNF17P17021 662 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 HLA-GP17693 338 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 CCL1P22362 96 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 CDAP32320 146 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 SORDQ00796 357 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 PCOLCEQ15113 449 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 CSRP2Q16527 193 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 AANATQ16613 207 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 PRAMEF20Q5VT98 475 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 RAET1LQ5VY80 246 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 FAM57BQ71RH2 274 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 CPAMD8Q8IZJ3 1885 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 ARRDC1Q8N5I2 433 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 OR8B12Q8NGG6 310 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 OR10S1Q8NGN2 331 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 OR4K15Q8NH41 348 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 THAP6Q8TBB0 222 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 FAM71F1Q96KD3 344 aaPredicted RBP6.53□□□□□ -1.36
ZNF540-206ENST00000589117 NKX3-1Q99801 234 aaPredicted RBP6.53□□□□□ -1.36
ZNF540-206ENST00000589117 MESP1Q9BRJ9 268 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 HPF1Q9NWY4 346 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 CABIN1Q9Y6J0 2220 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 A0A0U1RQV5 110 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 hCG_1807616A0A1W2PRN6 198 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 OR14I1A6ND48 311 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 D6RAR5 112 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 F8W735 103 aaPredicted RBP6.52□□□□□ -1.37
ZNF540-206ENST00000589117 CRTAPO75718 401 aaPredicted RBP6.52□□□□□ -1.37
ZNF540-206ENST00000589117 DUS4LO95620 317 aaKnown RBP6.52□□□□□ -1.37
ZNF540-206ENST00000589117 MPIG6BO95866 241 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 GNB3P16520 340 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 NAT1P18440 290 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 HRH1P35367 487 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 CASRP41180 1078 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 FOLR3P41439 243 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 OR3A2P47893 321 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 SLC6A9P48067 706 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 STARP49675 285 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 RPS27AP62979 156 aaKnown RBP6.52□□□□□ -1.37
ZNF540-206ENST00000589117 UBA52P62987 128 aaKnown RBP6.52□□□□□ -1.37
ZNF540-206ENST00000589117 RAC1P63000 192 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 H3F3AP84243 136 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 MC2RQ01718 297 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 SRSF4Q08170 494 aaKnown RBP6.52□□□□□ -1.37
ZNF540-206ENST00000589117 BAMBIQ13145 260 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 UNC119Q13432 240 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 ZNF345Q14585 488 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 C10orf128Q5T292 105 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 NAA40Q86UY6 237 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 RPS19BP1Q86WX3 136 aaKnown RBP6.52□□□□□ -1.37
ZNF540-206ENST00000589117 OR4S1Q8NGB4 309 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 OR2Y1Q8NGV0 311 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 TERB2Q8NHR7 220 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 COQ8AQ8NI60 647 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 PAQR8Q8TEZ7 354 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 MITD1Q8WV92 249 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 IMMP1LQ96LU5 166 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 DHRS9Q9BPW9 319 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 SLC25A32Q9H2D1 315 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 TRIOO75962 3097 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 PCNX3Q9H6A9 2034 aa6.52□□□□□ -1.37
ZNF540-206ENST00000589117 ZSCAN5BA6NJL1 495 aa6.51□□□□□ -1.37
ZNF540-206ENST00000589117 LAMTOR5O43504 91 aa6.51□□□□□ -1.37
ZNF540-206ENST00000589117 CDC14BO60729 498 aa6.51□□□□□ -1.37
ZNF540-206ENST00000589117 SLC25A4P12235 298 aa6.51□□□□□ -1.37
ZNF540-206ENST00000589117 LIFP15018 202 aa6.51□□□□□ -1.37
ZNF540-206ENST00000589117 HIST1H1DP16402 221 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms