RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 CST4P01036 141 aa17.03■□□□□ 0.32
DDX39A-207ENST00000588542 IGHV4-31P0DP07 118 aa17.03■□□□□ 0.32
DDX39A-207ENST00000588542 ATP6V1B1P15313 513 aa17.03■□□□□ 0.32
DDX39A-207ENST00000588542 KIR3DL2P43630 455 aa17.03■□□□□ 0.32
DDX39A-207ENST00000588542 MAP2K3P46734 347 aa17.03■□□□□ 0.32
DDX39A-207ENST00000588542 SLC3A1Q07837 685 aa17.03■□□□□ 0.32
DDX39A-207ENST00000588542 MPPED2Q15777 294 aa17.03■□□□□ 0.32
DDX39A-207ENST00000588542 Q6ZSR3 168 aa17.03■□□□□ 0.32
DDX39A-207ENST00000588542 Q71RC1 249 aaPredicted RBP17.03■□□□□ 0.32
DDX39A-207ENST00000588542 FAM220AQ7Z4H9 259 aa17.03■□□□□ 0.32
DDX39A-207ENST00000588542 SPERTQ8NA61 448 aa17.03■□□□□ 0.32
DDX39A-207ENST00000588542 CLDND2Q8NHS1 167 aa17.03■□□□□ 0.32
DDX39A-207ENST00000588542 ITFG2Q969R8 447 aa17.03■□□□□ 0.32
DDX39A-207ENST00000588542 FAM71F1Q96KD3 344 aaPredicted RBP17.03■□□□□ 0.32
DDX39A-207ENST00000588542 ALG8Q9BVK2 526 aa17.03■□□□□ 0.32
DDX39A-207ENST00000588542 JAM3Q9BX67 310 aa17.03■□□□□ 0.32
DDX39A-207ENST00000588542 NARFLQ9H6Q4 476 aa17.03■□□□□ 0.32
DDX39A-207ENST00000588542 INPP5EQ9NRR6 644 aa17.03■□□□□ 0.32
DDX39A-207ENST00000588542 NIPBLQ6KC79 2804 aaeCLIP17.03■□□□□ 0.322e-7■□□□□ 8.1
DDX39A-207ENST00000588542 TMEM178BH3BS89 294 aa17.02■□□□□ 0.32
DDX39A-207ENST00000588542 J3QLW9 94 aa17.02■□□□□ 0.32
DDX39A-207ENST00000588542 P2RY10O00398 339 aa17.02■□□□□ 0.32
DDX39A-207ENST00000588542 LIMS3P0CW19 117 aa17.02■□□□□ 0.32
DDX39A-207ENST00000588542 LIMS4P0CW20 117 aa17.02■□□□□ 0.32
DDX39A-207ENST00000588542 ZNF19P17023 458 aa17.02■□□□□ 0.32
DDX39A-207ENST00000588542 ACTA2P62736 377 aa17.02■□□□□ 0.32
DDX39A-207ENST00000588542 ACTG2P63267 376 aa17.02■□□□□ 0.32
DDX39A-207ENST00000588542 SNCBQ16143 134 aa17.02■□□□□ 0.32
DDX39A-207ENST00000588542 ZNF181Q2M3W8 571 aa17.02■□□□□ 0.32
DDX39A-207ENST00000588542 WDR38Q5JTN6 314 aa17.02■□□□□ 0.32
DDX39A-207ENST00000588542 FDX2Q6P4F2 183 aa17.02■□□□□ 0.32
DDX39A-207ENST00000588542 THAP5Q7Z6K1 395 aa17.02■□□□□ 0.32
DDX39A-207ENST00000588542 COMMD2Q86X83 199 aa17.02■□□□□ 0.32
DDX39A-207ENST00000588542 RAB1CQ92928 201 aa17.02■□□□□ 0.32
DDX39A-207ENST00000588542 ITPKCQ96DU7 683 aa17.02■□□□□ 0.32
DDX39A-207ENST00000588542 PELI1Q96FA3 418 aa17.02■□□□□ 0.32
DDX39A-207ENST00000588542 C4orf36Q96KX1 117 aa17.02■□□□□ 0.32
DDX39A-207ENST00000588542 PAPOLGQ9BWT3 736 aaKnown RBP17.02■□□□□ 0.32
DDX39A-207ENST00000588542 ISG20L2Q9H9L3 353 aaKnown RBP17.02■□□□□ 0.32
DDX39A-207ENST00000588542 NPTNQ9Y639 398 aa17.02■□□□□ 0.32
DDX39A-207ENST00000588542 V9GYS6 101 aa17.02■□□□□ 0.32
DDX39A-207ENST00000588542 ZFHX3Q15911 3703 aa17.01■□□□□ 0.31
DDX39A-207ENST00000588542 ZNF850A8MQ14 1090 aa17.01■□□□□ 0.31
DDX39A-207ENST00000588542 IFNL4K9M1U5 179 aa17.01■□□□□ 0.31
DDX39A-207ENST00000588542 CD5LO43866 347 aa17.01■□□□□ 0.31
DDX39A-207ENST00000588542 DHRS3O75911 302 aa17.01■□□□□ 0.31
DDX39A-207ENST00000588542 IGHV2-70P01814 119 aa17.01■□□□□ 0.31
DDX39A-207ENST00000588542 CCL1P22362 96 aa17.01■□□□□ 0.31
DDX39A-207ENST00000588542 NANOS3P60323 173 aaKnown RBP17.01■□□□□ 0.31
DDX39A-207ENST00000588542 LMO4P61968 165 aa17.01■□□□□ 0.31
DDX39A-207ENST00000588542 PRDX4Q13162 271 aa17.01■□□□□ 0.31
DDX39A-207ENST00000588542 ODF4Q2M2E3 257 aa17.01■□□□□ 0.31
DDX39A-207ENST00000588542 WDR86Q86TI4 376 aa17.01■□□□□ 0.31
DDX39A-207ENST00000588542 SYS1Q8N2H4 156 aa17.01■□□□□ 0.31
DDX39A-207ENST00000588542 FTMTQ8N4E7 242 aa17.01■□□□□ 0.31
DDX39A-207ENST00000588542 SEMA6DQ8NFY4 1073 aa17.01■□□□□ 0.31
DDX39A-207ENST00000588542 OR14K1Q8NGZ2 314 aa17.01■□□□□ 0.31
DDX39A-207ENST00000588542 OR2G2Q8NGZ5 317 aa17.01■□□□□ 0.31
DDX39A-207ENST00000588542 Q8TCH9 128 aa17.01■□□□□ 0.31
DDX39A-207ENST00000588542 PIGCQ92535 297 aa17.01■□□□□ 0.31
DDX39A-207ENST00000588542 HPS1Q92902 700 aa17.01■□□□□ 0.31
DDX39A-207ENST00000588542 ERGIC1Q969X5 290 aa17.01■□□□□ 0.31
DDX39A-207ENST00000588542 TIMD4Q96H15 378 aa17.01■□□□□ 0.31
DDX39A-207ENST00000588542 FGF23Q9GZV9 251 aaPredicted RBP17.01■□□□□ 0.31
DDX39A-207ENST00000588542 VCX3BQ9H321 246 aa17.01■□□□□ 0.31
DDX39A-207ENST00000588542 UFSP2Q9NUQ7 469 aa17.01■□□□□ 0.31
DDX39A-207ENST00000588542 MPC1Q9Y5U8 109 aa17.01■□□□□ 0.31
DDX39A-207ENST00000588542 SETD2Q9BYW2 2564 aaPredicted RBP17.01■□□□□ 0.31
DDX39A-207ENST00000588542 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17■□□□□ 0.31
DDX39A-207ENST00000588542 ZNF816-ZNF321PA0A0X1KG74 233 aa17■□□□□ 0.31
DDX39A-207ENST00000588542 CYB5R3P00387 301 aaPredicted RBP17■□□□□ 0.31
DDX39A-207ENST00000588542 FAHP16930 419 aa17■□□□□ 0.31
DDX39A-207ENST00000588542 DCKP27707 260 aa17■□□□□ 0.31
DDX39A-207ENST00000588542 GNALP38405 381 aa17■□□□□ 0.31
DDX39A-207ENST00000588542 ETV1P50549 477 aa17■□□□□ 0.31
DDX39A-207ENST00000588542 RIPPLY1Q0D2K3 151 aa17■□□□□ 0.31
DDX39A-207ENST00000588542 ZBTB37Q5TC79 503 aa17■□□□□ 0.31
DDX39A-207ENST00000588542 EGFL6Q8IUX8 553 aa17■□□□□ 0.31
DDX39A-207ENST00000588542 OR8S1Q8NH09 359 aa17■□□□□ 0.31
DDX39A-207ENST00000588542 GGHQ92820 318 aa17■□□□□ 0.31
DDX39A-207ENST00000588542 MRPL48Q96GC5 212 aaKnown RBP17■□□□□ 0.31
DDX39A-207ENST00000588542 C1orf159Q96HA4 380 aa17■□□□□ 0.31
DDX39A-207ENST00000588542 PLCXD1Q9NUJ7 323 aa17■□□□□ 0.31
DDX39A-207ENST00000588542 C14orf119Q9NWQ9 140 aa17■□□□□ 0.31
DDX39A-207ENST00000588542 FRRS1LQ9P0K9 344 aa17■□□□□ 0.31
DDX39A-207ENST00000588542 PIGLQ9Y2B2 252 aa17■□□□□ 0.31
DDX39A-207ENST00000588542 RRP15Q9Y3B9 282 aaKnown RBP17■□□□□ 0.31
DDX39A-207ENST00000588542 SVEP1Q4LDE5 3571 aa16.99■□□□□ 0.31
DDX39A-207ENST00000588542 NF1P21359 2839 aa16.99■□□□□ 0.31
DDX39A-207ENST00000588542 XPNPEP2O43895 674 aa16.99■□□□□ 0.31
DDX39A-207ENST00000588542 MTRF1O75570 445 aaKnown RBP16.99■□□□□ 0.31
DDX39A-207ENST00000588542 GRPP07492 148 aa16.99■□□□□ 0.31
DDX39A-207ENST00000588542 GZMKP49863 264 aa16.99■□□□□ 0.31
DDX39A-207ENST00000588542 ZMYND11Q15326 602 aa16.99■□□□□ 0.31
DDX39A-207ENST00000588542 IZUMO2Q6UXV1 221 aa16.99■□□□□ 0.31
DDX39A-207ENST00000588542 DOK3Q7L591 496 aa16.99■□□□□ 0.31
DDX39A-207ENST00000588542 PEG10Q86TG7 708 aaKnown RBP16.99■□□□□ 0.31
DDX39A-207ENST00000588542 C11orf53Q8IXP5 236 aa16.99■□□□□ 0.31
DDX39A-207ENST00000588542 HPSE2Q8WWQ2 592 aa16.99■□□□□ 0.31
DDX39A-207ENST00000588542 OR5P3Q8WZ94 311 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 277.1 ms