RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.32■□□□□ 0.2
TPM4-208ENST00000588410 TCEANCQ8N8B7 351 aa16.32■□□□□ 0.2
TPM4-208ENST00000588410 OR8B12Q8NGG6 310 aa16.32■□□□□ 0.2
TPM4-208ENST00000588410 TECTBQ96PL2 329 aa16.32■□□□□ 0.2
TPM4-208ENST00000588410 ABCB9Q9NP78 766 aa16.32■□□□□ 0.2
TPM4-208ENST00000588410 MPC1Q9Y5U8 109 aa16.32■□□□□ 0.2
TPM4-208ENST00000588410 TMEM269A0A1B0GVZ9 245 aa16.31■□□□□ 0.2
TPM4-208ENST00000588410 ACOD1A6NK06 481 aa16.31■□□□□ 0.2
TPM4-208ENST00000588410 SLC22A31A6NKX4 558 aa16.31■□□□□ 0.2
TPM4-208ENST00000588410 ZAR1LA6NP61 321 aa16.31■□□□□ 0.2
TPM4-208ENST00000588410 M0R129 80 aa16.31■□□□□ 0.2
TPM4-208ENST00000588410 PSMD9O00233 223 aa16.31■□□□□ 0.2
TPM4-208ENST00000588410 ADAM20O43506 726 aa16.31■□□□□ 0.2
TPM4-208ENST00000588410 HOXA4Q00056 320 aaPredicted RBP16.31■□□□□ 0.2
TPM4-208ENST00000588410 COMMD2Q86X83 199 aa16.31■□□□□ 0.2
TPM4-208ENST00000588410 OR1M1Q8NGA1 313 aa16.31■□□□□ 0.2
TPM4-208ENST00000588410 FAM81AQ8TBF8 368 aa16.31■□□□□ 0.2
TPM4-208ENST00000588410 TMEM163Q8TC26 289 aa16.31■□□□□ 0.2
TPM4-208ENST00000588410 LRRC29Q8WV35 223 aa16.31■□□□□ 0.2
TPM4-208ENST00000588410 NUDT16L1Q9BRJ7 211 aaKnown RBP16.31■□□□□ 0.2
TPM4-208ENST00000588410 RTL8AQ9BWD3 113 aa16.31■□□□□ 0.2
TPM4-208ENST00000588410 SEMA6AQ9H2E6 1030 aa16.31■□□□□ 0.2
TPM4-208ENST00000588410 RNPEPL1Q9HAU8 725 aa16.31■□□□□ 0.2
TPM4-208ENST00000588410 IKZF2Q9UKS7 526 aa16.31■□□□□ 0.2
TPM4-208ENST00000588410 KIR2DS1A0A191URI9 304 aa16.3■□□□□ 0.2
TPM4-208ENST00000588410 ZNF850A8MQ14 1090 aa16.3■□□□□ 0.2
TPM4-208ENST00000588410 ZNF254O75437 659 aa16.3■□□□□ 0.2
TPM4-208ENST00000588410 PSMB10P40306 273 aa16.3■□□□□ 0.2
TPM4-208ENST00000588410 ACTG1P63261 375 aa16.3■□□□□ 0.2
TPM4-208ENST00000588410 PAX2Q02962 417 aa16.3■□□□□ 0.2
TPM4-208ENST00000588410 PRDX4Q13162 271 aa16.3■□□□□ 0.2
TPM4-208ENST00000588410 ZNF829Q3KNS6 432 aaPredicted RBP16.3■□□□□ 0.2
TPM4-208ENST00000588410 NXNL2Q5VZ03 156 aa16.3■□□□□ 0.2
TPM4-208ENST00000588410 CD276Q5ZPR3 534 aa16.3■□□□□ 0.2
TPM4-208ENST00000588410 C12orf73Q69YU5 71 aa16.3■□□□□ 0.2
TPM4-208ENST00000588410 BCDIN3DQ7Z5W3 292 aaKnown RBP16.3■□□□□ 0.2
TPM4-208ENST00000588410 ZNF679Q8IYX0 411 aa16.3■□□□□ 0.2
TPM4-208ENST00000588410 GALNT4Q8N4A0 578 aa16.3■□□□□ 0.2
TPM4-208ENST00000588410 GCSAMQ8N6F7 178 aa16.3■□□□□ 0.2
TPM4-208ENST00000588410 PIGCQ92535 297 aa16.3■□□□□ 0.2
TPM4-208ENST00000588410 CENPNQ96H22 339 aaPredicted RBP16.3■□□□□ 0.2
TPM4-208ENST00000588410 HIST1H2AAQ96QV6 131 aa16.3■□□□□ 0.2
TPM4-208ENST00000588410 IL4I1Q96RQ9 567 aa16.3■□□□□ 0.2
TPM4-208ENST00000588410 MS4A7Q9GZW8 240 aaPredicted RBP16.3■□□□□ 0.2
TPM4-208ENST00000588410 STAB1Q9NY15 2570 aa16.29■□□□□ 0.2
TPM4-208ENST00000588410 ENSAO43768 121 aaKnown RBP16.29■□□□□ 0.2
TPM4-208ENST00000588410 CST4P01036 141 aa16.29■□□□□ 0.2
TPM4-208ENST00000588410 GYPAP02724 150 aa16.29■□□□□ 0.2
TPM4-208ENST00000588410 PPIAL4GP0DN37 164 aa16.29■□□□□ 0.2
TPM4-208ENST00000588410 EPHA2P29317 976 aa16.29■□□□□ 0.2
TPM4-208ENST00000588410 RIDAP52758 137 aaKnown RBP16.29■□□□□ 0.2
TPM4-208ENST00000588410 ACTR3P61158 418 aa16.29■□□□□ 0.2
TPM4-208ENST00000588410 CSNK2BP67870 215 aa16.29■□□□□ 0.2
TPM4-208ENST00000588410 ROM1Q03395 351 aa16.29■□□□□ 0.2
TPM4-208ENST00000588410 MICBQ29980 383 aa16.29■□□□□ 0.2
TPM4-208ENST00000588410 KLF17Q5JT82 389 aaPredicted RBP16.29■□□□□ 0.2
TPM4-208ENST00000588410 ZNF841Q6ZN19 808 aa16.29■□□□□ 0.2
TPM4-208ENST00000588410 CCDC121Q6ZUS5 278 aa16.29■□□□□ 0.2
TPM4-208ENST00000588410 KCTD8Q6ZWB6 473 aa16.29■□□□□ 0.2
TPM4-208ENST00000588410 WDR86Q86TI4 376 aa16.29■□□□□ 0.2
TPM4-208ENST00000588410 GID4Q8IVV7 300 aa16.29■□□□□ 0.2
TPM4-208ENST00000588410 ITPKCQ96DU7 683 aa16.29■□□□□ 0.2
TPM4-208ENST00000588410 LYZL4Q96KX0 146 aa16.29■□□□□ 0.2
TPM4-208ENST00000588410 OR8B4Q96RC9 309 aa16.29■□□□□ 0.2
TPM4-208ENST00000588410 MNTQ99583 582 aa16.29■□□□□ 0.2
TPM4-208ENST00000588410 CIB1Q99828 191 aa16.29■□□□□ 0.2
TPM4-208ENST00000588410 TTTY10Q9BZA0 68 aa16.29■□□□□ 0.2
TPM4-208ENST00000588410 RIBC2Q9H4K1 309 aa16.29■□□□□ 0.2
TPM4-208ENST00000588410 PPP1R3EQ9H7J1 279 aa16.29■□□□□ 0.2
TPM4-208ENST00000588410 FAM206AQ9NX38 181 aa16.29■□□□□ 0.2
TPM4-208ENST00000588410 ZNF69Q9UC07 566 aa16.29■□□□□ 0.2
TPM4-208ENST00000588410 OAZ3Q9UMX2 235 aa16.29■□□□□ 0.2
TPM4-208ENST00000588410 COPS3Q9UNS2 423 aa16.29■□□□□ 0.2
TPM4-208ENST00000588410 IGHV3OR15-7A0A075B7D8 119 aa16.28■□□□□ 0.2
TPM4-208ENST00000588410 LHBP01229 141 aa16.28■□□□□ 0.2
TPM4-208ENST00000588410 ACKR3P25106 362 aa16.28■□□□□ 0.2
TPM4-208ENST00000588410 DCTDP32321 178 aa16.28■□□□□ 0.2
TPM4-208ENST00000588410 MAP2K3P46734 347 aa16.28■□□□□ 0.2
TPM4-208ENST00000588410 AADACL4Q5VUY2 407 aa16.28■□□□□ 0.2
TPM4-208ENST00000588410 C11orf53Q8IXP5 236 aa16.28■□□□□ 0.2
TPM4-208ENST00000588410 SLC35F2Q8IXU6 374 aa16.28■□□□□ 0.2
TPM4-208ENST00000588410 ZDHHC23Q8IYP9 409 aa16.28■□□□□ 0.2
TPM4-208ENST00000588410 RNF170Q96K19 258 aa16.28■□□□□ 0.2
TPM4-208ENST00000588410 PBOV1Q9GZY1 135 aa16.28■□□□□ 0.2
TPM4-208ENST00000588410 CTSZQ9UBR2 303 aa16.28■□□□□ 0.2
TPM4-208ENST00000588410 GTF2A1LQ9UNN4 478 aa16.28■□□□□ 0.2
TPM4-208ENST00000588410 IGHV3OR16-10A0A075B7F0 116 aa16.27■□□□□ 0.2
TPM4-208ENST00000588410 A0A0U1RQV5 110 aa16.27■□□□□ 0.2
TPM4-208ENST00000588410 SAC3D1A6NKF1 404 aa16.27■□□□□ 0.2
TPM4-208ENST00000588410 TMEM210A6NLX4 147 aa16.27■□□□□ 0.2
TPM4-208ENST00000588410 ZNF670-ZNF695F2Z2N8 137 aa16.27■□□□□ 0.2
TPM4-208ENST00000588410 HAX1O00165 279 aa16.27■□□□□ 0.2
TPM4-208ENST00000588410 CDIPTO14735 213 aa16.27■□□□□ 0.2
TPM4-208ENST00000588410 MUC1P15941 1255 aaPredicted RBP16.27■□□□□ 0.2
TPM4-208ENST00000588410 EGR1P18146 543 aa16.27■□□□□ 0.2
TPM4-208ENST00000588410 CXCR4P61073 352 aa16.27■□□□□ 0.2
TPM4-208ENST00000588410 EFNB1P98172 346 aa16.27■□□□□ 0.2
TPM4-208ENST00000588410 POU4F2Q12837 409 aa16.27■□□□□ 0.2
TPM4-208ENST00000588410 TEX36Q5VZQ5 186 aa16.27■□□□□ 0.2
TPM4-208ENST00000588410 ZNF322Q6U7Q0 402 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms