RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 ALKBH6Q3KRA9 238 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 ZNF404Q494X3 552 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 NCMAPQ5T1S8 102 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 HES5Q5TA89 166 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 ZBTB37Q5TC79 503 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 TMEM42Q69YG0 159 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 UTS2BQ765I0 119 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 LYPD6Q86Y78 171 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 BHLHE23Q8NDY6 225 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 OR52N4Q8NGI2 321 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 OR5D14Q8NGL3 314 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 MCFD2Q8NI22 146 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 KLF14Q8TD94 323 aaPredicted RBP9.7□□□□□ -0.86
VMP1-207ENST00000588131 UBASH3BQ8TF42 649 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 PP6455Q8WZ26 134 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 PIGCQ92535 297 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 C10orf35Q96D05 121 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 NXF2Q9GZY0 626 aaKnown RBP9.7□□□□□ -0.86
VMP1-207ENST00000588131 CGGBP1Q9UFW8 167 aaPredicted RBP9.7□□□□□ -0.86
VMP1-207ENST00000588131 GPR160Q9UJ42 338 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 RHBDD3Q9Y3P4 386 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 V9GY05 133 aa9.7□□□□□ -0.86
VMP1-207ENST00000588131 FLNBO75369 2602 aaKnown RBP9.69□□□□□ -0.86
VMP1-207ENST00000588131 A0A0B4J203 849 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.69□□□□□ -0.86
VMP1-207ENST00000588131 TUBAL3A6NHL2 446 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 ZNF850A8MQ14 1090 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 SIAH2O43255 324 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 GMDSO60547 372 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 CST4P01036 141 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 CD37P11049 281 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 RAC2P15153 192 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 BDKRB2P30411 391 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 FABP6P51161 128 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 CLVS2Q5SYC1 327 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 IDNKQ5T6J7 187 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 DDI2Q5TDH0 399 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 RGS7BPQ6MZT1 257 aaPredicted RBP9.69□□□□□ -0.86
VMP1-207ENST00000588131 ADAM5Q6NVV9 412 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 CRIP3Q6Q6R5 217 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 VHLLQ6RSH7 139 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 UNQ6126/PRO20091Q6UXV3 157 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 MOB3CQ70IA8 216 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 DMRTC2Q8IXT2 367 aaPredicted RBP9.69□□□□□ -0.86
VMP1-207ENST00000588131 NPRL2Q8WTW4 380 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 DVL3Q92997 716 aaPredicted RBP9.69□□□□□ -0.86
VMP1-207ENST00000588131 PIGTQ969N2 578 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 HAVCR1Q96D42 359 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 PLPPR2Q96GM1 343 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 SPACA5Q96QH8 159 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 FGF23Q9GZV9 251 aaPredicted RBP9.69□□□□□ -0.86
VMP1-207ENST00000588131 NGBQ9NPG2 151 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 TMEM138Q9NPI0 162 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 KCNN3Q9UGI6 736 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 DAPK2Q9UIK4 370 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 SPEF1Q9Y4P9 236 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 RELNP78509 3460 aa9.69□□□□□ -0.86
VMP1-207ENST00000588131 HIVEP3Q5T1R4 2406 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 A0A075B6Q4 140 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 IFITM5A6NNB3 132 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 IQCF6A8MYZ5 107 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 CLPXO76031 633 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 ALX3O95076 343 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 NRASP01111 189 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 PRF1P14222 555 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 TUBG1P23258 451 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 AZGP1P25311 298 aaKnown RBP9.68□□□□□ -0.86
VMP1-207ENST00000588131 LOXP28300 417 aaPredicted RBP9.68□□□□□ -0.86
VMP1-207ENST00000588131 GLRXP35754 106 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 CLDN12P56749 244 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 SRSF1Q07955 248 aaKnown RBP eCLIP9.68□□□□□ -0.86
VMP1-207ENST00000588131 PRDX4Q13162 271 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 ZNF718Q3SXZ3 478 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 DMRTA1Q5VZB9 504 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 MBNL2Q5VZF2 373 aaKnown RBP9.68□□□□□ -0.86
VMP1-207ENST00000588131 SLC22A25Q6T423 547 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 KRT74Q7RTS7 529 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 LRP11Q86VZ4 500 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 NKAIN3Q8N8D7 197 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 CSNK2A3Q8NEV1 391 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 NUP37Q8NFH4 326 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 TRMT10AQ8TBZ6 339 aaKnown RBP9.68□□□□□ -0.86
VMP1-207ENST00000588131 TBC1D15Q8TC07 691 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 SSC4DQ8WTU2 575 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 TMEM171Q8WVE6 324 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 PAPOLGQ9BWT3 736 aaKnown RBP9.68□□□□□ -0.86
VMP1-207ENST00000588131 C6orf62Q9GZU0 229 aaPredicted RBP9.68□□□□□ -0.86
VMP1-207ENST00000588131 ESRP2Q9H6T0 727 aaKnown RBP9.68□□□□□ -0.86
VMP1-207ENST00000588131 SMURF1Q9HCE7 757 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 TUBG2Q9NRH3 451 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 PURGQ9UJV8 347 aaKnown RBP9.68□□□□□ -0.86
VMP1-207ENST00000588131 ATP23Q9Y6H3 246 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 NBASA2RRP1 2371 aa9.68□□□□□ -0.86
VMP1-207ENST00000588131 KALRNO60229 2985 aa9.67□□□□□ -0.86
VMP1-207ENST00000588131 MEGF11A6BM72 1044 aa9.67□□□□□ -0.86
VMP1-207ENST00000588131 WIPF3A6NGB9 483 aa9.67□□□□□ -0.86
VMP1-207ENST00000588131 ANKRD30BLA7E2S9 258 aa9.67□□□□□ -0.86
VMP1-207ENST00000588131 DEFB108AA8MXU0 73 aa9.67□□□□□ -0.86
VMP1-207ENST00000588131 SHISA9B4DS77 424 aa9.67□□□□□ -0.86
VMP1-207ENST00000588131 AIPO00170 330 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms