RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 CCBE1Q6UXH8 406 aaPredicted RBP9.04□□□□□ -0.96
LIG3-203ENST00000585370 COLCA1Q6ZS62 124 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 OR2W3Q7Z3T1 314 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 NAA40Q86UY6 237 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 JAGN1Q8N5M9 183 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 SEMA6DQ8NFY4 1073 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 OR51D1Q8NGF3 324 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 OR1K1Q8NGR3 316 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 FCAMRQ8WWV6 532 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 SPSB4Q96A44 273 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 ITPKCQ96DU7 683 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 ZC3HAV1LQ96H79 300 aaKnown RBP9.04□□□□□ -0.96
LIG3-203ENST00000585370 TECTBQ96PL2 329 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 ABHD1Q96SE0 405 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 OPA3Q9H6K4 179 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 PLSCR4Q9NRQ2 329 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 MRPS7Q9Y2R9 242 aaKnown RBP9.04□□□□□ -0.96
LIG3-203ENST00000585370 NCOA6Q14686 2063 aaPredicted RBP9.04□□□□□ -0.96
LIG3-203ENST00000585370 CELSR1Q9NYQ6 3014 aa9.04□□□□□ -0.96
LIG3-203ENST00000585370 PKDREJQ9NTG1 2253 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 DNAJC13O75165 2243 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 J3QW42 95 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 SULT1C2O00338 296 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 LDLRAD4O15165 306 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 PLA2G10O15496 165 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 LMX1BO60663 402 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 DBHP09172 617 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 CD79AP11912 226 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 PRKACBP22694 351 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 ZNF93P35789 620 aaPredicted RBP9.03□□□□□ -0.96
LIG3-203ENST00000585370 GSK3AP49840 483 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 BCAP31P51572 246 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 TDGF1P3P51864 188 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 RAB1AP62820 205 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 SSBP1Q04837 148 aaKnown RBP9.03□□□□□ -0.96
LIG3-203ENST00000585370 DYRK1AQ13627 763 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 ACSF3Q4G176 576 aaPredicted RBP9.03□□□□□ -0.96
LIG3-203ENST00000585370 ZNF57Q68EA5 555 aaPredicted RBP9.03□□□□□ -0.96
LIG3-203ENST00000585370 SP5Q6BEB4 398 aaPredicted RBP9.03□□□□□ -0.96
LIG3-203ENST00000585370 TFAP2EQ6VUC0 442 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 Q6ZT83 130 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 FJX1Q86VR8 437 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 PNLDC1Q8NA58 520 aaKnown RBP9.03□□□□□ -0.96
LIG3-203ENST00000585370 DUSP18Q8NEJ0 188 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 C1orf162Q8NEQ5 155 aaPredicted RBP9.03□□□□□ -0.96
LIG3-203ENST00000585370 OR51A2Q8NGJ7 313 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 OR5L1Q8NGL2 311 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 OR13C9Q8NGT0 318 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 FGFBP3Q8TAT2 258 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 SMIM4Q8WVI0 70 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 APOBEC3DQ96AK3 386 aaPredicted RBP9.03□□□□□ -0.96
LIG3-203ENST00000585370 SPSB1Q96BD6 273 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 REEP6Q96HR9 211 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 LYZL4Q96KX0 146 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 NUDT16L1Q9BRJ7 211 aaKnown RBP9.03□□□□□ -0.96
LIG3-203ENST00000585370 CHST5Q9GZS9 411 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 C12orf49Q9H741 205 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 RBFOX1Q9NWB1 397 aaKnown RBP9.03□□□□□ -0.96
LIG3-203ENST00000585370 ZNF224Q9NZL3 707 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 PRSS50Q9UI38 385 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 PIGLQ9Y2B2 252 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 ZNF407Q9C0G0 2248 aa9.03□□□□□ -0.96
LIG3-203ENST00000585370 hCG_2014768A0A024R1R8 64 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 A0A096LPE4 126 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 TMEM272A0A1B0GTI8 110 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 A0A1B0GUH1 482 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 A0A1W2PPZ6 126 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 FUOMA2VDF0 154 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 MBD3L4A6NDZ8 208 aaPredicted RBP9.02□□□□□ -0.97
LIG3-203ENST00000585370 MBD3L3A6NE82 208 aaPredicted RBP9.02□□□□□ -0.97
LIG3-203ENST00000585370 NAP1L6A6NFF2 107 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 MBD3L5A6NJ08 208 aaPredicted RBP9.02□□□□□ -0.97
LIG3-203ENST00000585370 FIGNL2A6NMB9 653 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 EEF1E1O43324 174 aaKnown RBP9.02□□□□□ -0.97
LIG3-203ENST00000585370 LYRM1O43325 122 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 CTAG2O75638 210 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 CHRM2P08172 466 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 HCKP08631 526 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 PATE4P0C8F1 98 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 ABOP16442 354 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 CDK2P24941 298 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 STOMP27105 288 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 APLNRP35414 380 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 ALDH3B1P43353 468 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 KIR2DL2P43627 348 aaPredicted RBP9.02□□□□□ -0.97
LIG3-203ENST00000585370 PTH2RP49190 550 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 PER3P56645 1201 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 TAS2R20P59543 309 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 MALLQ13021 153 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 CNN3Q15417 329 aaKnown RBP9.02□□□□□ -0.97
LIG3-203ENST00000585370 TAB1Q15750 504 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 GSG1Q2KHT4 349 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 GFOD2Q3B7J2 385 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 PLXDC2Q6UX71 529 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 DNM1P46Q6ZS02 220 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 NRARPQ7Z6K4 114 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 OR5AS1Q8N127 324 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 TOMM5Q8N4H5 51 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 CPEB3Q8NE35 698 aaKnown RBP9.02□□□□□ -0.97
LIG3-203ENST00000585370 OR52N4Q8NGI2 321 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms