RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 CCDC54Q8NEL0 328 aa11.81□□□□□ -0.52
TRAF4-215ENST00000584944 OR5AK2Q8NH90 309 aa11.81□□□□□ -0.52
TRAF4-215ENST00000584944 UBASH3BQ8TF42 649 aa11.81□□□□□ -0.52
TRAF4-215ENST00000584944 TSEN15Q8WW01 171 aaKnown RBP11.81□□□□□ -0.52
TRAF4-215ENST00000584944 PIGCQ92535 297 aa11.81□□□□□ -0.52
TRAF4-215ENST00000584944 FAM168AQ92567 244 aa11.81□□□□□ -0.52
TRAF4-215ENST00000584944 C18orf12Q96KH6 178 aa11.81□□□□□ -0.52
TRAF4-215ENST00000584944 G6PC2Q9NQR9 355 aa11.81□□□□□ -0.52
TRAF4-215ENST00000584944 BABAM2Q9NXR7 383 aa11.81□□□□□ -0.52
TRAF4-215ENST00000584944 IGHV1-69-2A0A0G2JMI3 117 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 LOC107986453A0A1B0GWG9 222 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 C5orf63A6NC05 138 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 H3BSH0 61 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 CDC14BO60729 498 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 NDUFS7O75251 213 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 HLA-DPB1P04440 258 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 INHBBP09529 407 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 IRF2P14316 349 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 CRHBPP24387 322 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 C21orf33P30042 268 aaPredicted RBP11.8□□□□□ -0.52
TRAF4-215ENST00000584944 CCR9P51686 369 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 CDH15P55291 814 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 WNT4P56705 351 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 SLC3A1Q07837 685 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 MED22Q15528 200 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 CLEC12BQ2HXU8 276 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 RPL22L1Q6P5R6 122 aaKnown RBP11.8□□□□□ -0.52
TRAF4-215ENST00000584944 OR13C3Q8NGS6 347 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 IGFBPL1Q8WX77 278 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 GTF3AQ92664 365 aaKnown RBP11.8□□□□□ -0.52
TRAF4-215ENST00000584944 RDH5Q92781 318 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 PPP1R14AQ96A00 147 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 TIMD4Q96H15 378 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 MICU1Q9BPX6 476 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 SLC30A2Q9BRI3 323 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 PIMREGQ9BSJ6 248 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 RTL8AQ9BWD3 113 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 FRRS1LQ9P0K9 344 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 ZNF319Q9P2F9 582 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 ERVK-18Q9QC07 812 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 IL19Q9UHD0 177 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 CLEC2DQ9UHP7 191 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 HHLA2Q9UM44 414 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 PPP1R3CQ9UQK1 317 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 MPC1Q9Y5U8 109 aa11.8□□□□□ -0.52
TRAF4-215ENST00000584944 FN1P02751 2386 aaKnown RBP11.8□□□□□ -0.52
TRAF4-215ENST00000584944 RAI1Q7Z5J4 1906 aaPredicted RBP11.8□□□□□ -0.52
TRAF4-215ENST00000584944 RTTNQ86VV8 2226 aa11.79□□□□□ -0.52
TRAF4-215ENST00000584944 LOC390937A0A1W2PQ73 354 aa11.79□□□□□ -0.52
TRAF4-215ENST00000584944 A6NLC8 198 aa11.79□□□□□ -0.52
TRAF4-215ENST00000584944 ZNF850A8MQ14 1090 aa11.79□□□□□ -0.52
TRAF4-215ENST00000584944 F5H5P2 479 aa11.79□□□□□ -0.52
TRAF4-215ENST00000584944 SRSF10O75494 262 aaKnown RBP11.79□□□□□ -0.52
TRAF4-215ENST00000584944 LY6HO94772 140 aa11.79□□□□□ -0.52
TRAF4-215ENST00000584944 HSMCR30P0CW71 290 aa11.79□□□□□ -0.52
TRAF4-215ENST00000584944 FAHP16930 419 aa11.79□□□□□ -0.52
TRAF4-215ENST00000584944 TGM4P49221 684 aa11.79□□□□□ -0.52
TRAF4-215ENST00000584944 OR8B8Q15620 311 aa11.79□□□□□ -0.52
TRAF4-215ENST00000584944 ZBTB37Q5TC79 503 aa11.79□□□□□ -0.52
TRAF4-215ENST00000584944 PLCXD3Q63HM9 321 aa11.79□□□□□ -0.52
TRAF4-215ENST00000584944 LAIR2Q6ISS4 152 aa11.79□□□□□ -0.52
TRAF4-215ENST00000584944 FDX2Q6P4F2 183 aa11.79□□□□□ -0.52
TRAF4-215ENST00000584944 PRSS57Q6UWY2 283 aa11.79□□□□□ -0.52
TRAF4-215ENST00000584944 Q71RC1 249 aaPredicted RBP11.79□□□□□ -0.52
TRAF4-215ENST00000584944 ZDHHC23Q8IYP9 409 aa11.79□□□□□ -0.52
TRAF4-215ENST00000584944 PRSS35Q8N3Z0 413 aa11.79□□□□□ -0.52
TRAF4-215ENST00000584944 SVOPQ8N4V2 548 aa11.79□□□□□ -0.52
TRAF4-215ENST00000584944 ZNF525Q8N782 197 aa11.79□□□□□ -0.52
TRAF4-215ENST00000584944 OR11L1Q8NGX0 322 aa11.79□□□□□ -0.52
TRAF4-215ENST00000584944 CCL17Q92583 94 aa11.79□□□□□ -0.52
TRAF4-215ENST00000584944 OR2V2Q96R30 315 aa11.79□□□□□ -0.52
TRAF4-215ENST00000584944 CDCA4Q9BXL8 241 aa11.79□□□□□ -0.52
TRAF4-215ENST00000584944 YTHDF1Q9BYJ9 559 aaKnown RBP11.79□□□□□ -0.52
TRAF4-215ENST00000584944 NEK6Q9HC98 313 aa11.79□□□□□ -0.52
TRAF4-215ENST00000584944 FKBP14Q9NWM8 211 aa11.79□□□□□ -0.52
TRAF4-215ENST00000584944 RHBDD3Q9Y3P4 386 aa11.79□□□□□ -0.52
TRAF4-215ENST00000584944 IGHV3-64DA0A0J9YX35 117 aa11.78□□□□□ -0.52
TRAF4-215ENST00000584944 DHRS7CA6NNS2 312 aa11.78□□□□□ -0.52
TRAF4-215ENST00000584944 GATBO75879 557 aaKnown RBP11.78□□□□□ -0.52
TRAF4-215ENST00000584944 NRASP01111 189 aa11.78□□□□□ -0.52
TRAF4-215ENST00000584944 HPXP02790 462 aa11.78□□□□□ -0.52
TRAF4-215ENST00000584944 CD2P06729 351 aa11.78□□□□□ -0.52
TRAF4-215ENST00000584944 ADH4P08319 380 aa11.78□□□□□ -0.52
TRAF4-215ENST00000584944 ACHEP22303 614 aa11.78□□□□□ -0.52
TRAF4-215ENST00000584944 GABARAPL2P60520 117 aa11.78□□□□□ -0.52
TRAF4-215ENST00000584944 SLC35A2P78381 396 aa11.78□□□□□ -0.52
TRAF4-215ENST00000584944 MRPS11P82912 194 aaKnown RBP11.78□□□□□ -0.52
TRAF4-215ENST00000584944 MVKQ03426 396 aa11.78□□□□□ -0.52
TRAF4-215ENST00000584944 PRDX4Q13162 271 aa11.78□□□□□ -0.52
TRAF4-215ENST00000584944 SPHARQ15513 63 aa11.78□□□□□ -0.52
TRAF4-215ENST00000584944 CLVS2Q5SYC1 327 aa11.78□□□□□ -0.52
TRAF4-215ENST00000584944 Q6ZR03 302 aa11.78□□□□□ -0.52
TRAF4-215ENST00000584944 PRSS48Q7RTY5 328 aa11.78□□□□□ -0.52
TRAF4-215ENST00000584944 RDH10Q8IZV5 341 aa11.78□□□□□ -0.52
TRAF4-215ENST00000584944 NANOGP1Q8N7R0 232 aa11.78□□□□□ -0.52
TRAF4-215ENST00000584944 HPS1Q92902 700 aa11.78□□□□□ -0.52
TRAF4-215ENST00000584944 LYZL4Q96KX0 146 aa11.78□□□□□ -0.52
TRAF4-215ENST00000584944 Q96MF0 132 aa11.78□□□□□ -0.52
TRAF4-215ENST00000584944 FN3KRPQ9HA64 309 aa11.78□□□□□ -0.52
TRAF4-215ENST00000584944 SLC7A11Q9UPY5 501 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms