RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 ZNF141Q15928 474 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 FBXO48Q5FWF7 155 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 CPTPQ5TA50 214 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 AADACL4Q5VUY2 407 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 OR4F3Q6IEY1 312 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 PRSS57Q6UWY2 283 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 SH2D6Q7Z4S9 175 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ZFP62Q8NB50 900 aaPredicted RBP1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 CATSPER1Q8NEC5 780 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 CPNE4Q96A23 557 aaPredicted RBP1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 NRBF2Q96F24 287 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 CPNE2Q96FN4 548 aaPredicted RBP1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ATXN7L3BQ96GX2 97 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC38A2Q96QD8 506 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 OR5M11Q96RB7 305 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 IL4I1Q96RQ9 567 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 MAPKAP1Q9BPZ7 522 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 LINC00470Q9BZP3 86 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 DPY30Q9C005 99 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 SHARPINQ9H0F6 387 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 RACGAP1Q9H0H5 632 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ING2Q9H160 280 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 PPA2Q9H2U2 334 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 VCX3BQ9H321 246 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 RGCCQ9H4X1 137 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 MOB1AQ9H8S9 216 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 EBF2Q9HAK2 575 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 RHOFQ9HBH0 211 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 FBXO6Q9NRD1 293 aaPredicted RBP1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 MAN2C1Q9NTJ4 1040 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 DEPPQ9NTK1 212 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 KCNIP1Q9NZI2 227 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 PURGQ9UJV8 347 aaKnown RBP1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 MCTS1Q9ULC4 181 aaKnown RBP1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 RASD1Q9Y272 281 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 FBXO7Q9Y3I1 522 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 C2CD3Q4AC94 2353 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 DMXL2Q8TDJ6 3036 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 PIGBOS1A0A0B4J2F0 54 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 TRGV8A0A0C4DH27 118 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 A8MT66 165 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 A8MUA0 341 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 E9PLD3 99 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 G3V4G9 280 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 H3BMQ9 156 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 BLOC1S5-TXNDC5H3BN57 136 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 PHYHO14832 338 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 TNFSF12O43508 249 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 CHST10O43529 356 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 HCRTR1O43613 425 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 MRPS14O60783 128 aaKnown RBP1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 RAMP1O60894 148 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ECDO95905 644 aaPredicted RBP1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 IGLV2-11P01706 119 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 STAG3L2P0CL84 134 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 HLA-DOBP13765 273 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF12P17014 697 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 GSTM3P21266 225 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 S100A3P33764 101 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 SAA4P35542 130 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ATP12AP54707 1039 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC35A1P78382 337 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 SRPXP78539 464 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ARG2P78540 354 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 MFGE8Q08431 387 aaPredicted RBP1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ECH1Q13011 328 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 C16orf72Q14CZ0 275 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ABRAXAS2Q15018 415 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 RFX4Q33E94 735 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ARHGAP11BQ3KRB8 267 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ACSF3Q4G176 576 aaPredicted RBP1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 TP53I3Q53FA7 332 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 DCST2Q5T1A1 773 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 FAM71E1Q6IPT2 247 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF613Q6PF04 617 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 CLEC2AQ6UVW9 174 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 NUFIP2Q7Z417 695 aaKnown RBP1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 BIVMQ86UB2 503 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 TGIF2LYQ8IUE0 185 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 PIANPQ8IYJ0 282 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 OR2L13Q8N349 312 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 CLDN22Q8N7P3 220 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 MDS2Q8NDY4 140 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 OR5AR1Q8NGP9 310 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF671Q8TAW3 534 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 FAM57AQ8TBR7 257 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 FAM110BQ8TC76 370 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 EEF1AKMT1Q8WVE0 214 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 DDIT4LQ96D03 193 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 RDH12Q96NR8 316 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 FOXC2Q99958 501 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 PARD6BQ9BYG5 372 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC22A4Q9H015 551 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF385DQ9H6B1 395 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 IL1RAPQ9NPH3 570 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 FAIMQ9NVQ4 179 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC7A8Q9UHI5 535 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 TRPM6Q9BX84 2022 aa1.61□□□□□ -2.15
SMCHD1-211ENST00000584897 FAM220BPB1ANY3 271 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 C5orf58C9J3I9 102 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 248.3 ms