RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP22.79■■□□□ 1.242e-7■■■■□ 19.6
SMARCD2-210ENST00000584400 LOC110117498-PIK3R3F6TDL0 507 aa22.78■■□□□ 1.24
SMARCD2-210ENST00000584400 MTRF1O75570 445 aaKnown RBP22.78■■□□□ 1.24
SMARCD2-210ENST00000584400 BAG2O95816 211 aa22.78■■□□□ 1.24
SMARCD2-210ENST00000584400 KRT8P05787 483 aa22.78■■□□□ 1.24
SMARCD2-210ENST00000584400 WNT2P09544 360 aa22.78■■□□□ 1.24
SMARCD2-210ENST00000584400 ZIK1Q3SY52 487 aaPredicted RBP22.78■■□□□ 1.24
SMARCD2-210ENST00000584400 MALRD1Q5VYJ5 2156 aa22.78■■□□□ 1.24
SMARCD2-210ENST00000584400 DCDC5Q6ZRR9 648 aa22.78■■□□□ 1.24
SMARCD2-210ENST00000584400 GALNT4Q8N4A0 578 aa22.78■■□□□ 1.24
SMARCD2-210ENST00000584400 NEIL1Q96FI4 390 aaPredicted RBP22.78■■□□□ 1.24
SMARCD2-210ENST00000584400 HIST1H2AAQ96QV6 131 aa22.78■■□□□ 1.24
SMARCD2-210ENST00000584400 TMEM246Q9BRR3 403 aa22.78■■□□□ 1.24
SMARCD2-210ENST00000584400 RTL8AQ9BWD3 113 aa22.78■■□□□ 1.24
SMARCD2-210ENST00000584400 METRNQ9UJH8 293 aa22.78■■□□□ 1.24
SMARCD2-210ENST00000584400 POLR3KQ9Y2Y1 108 aaPredicted RBP22.78■■□□□ 1.24
SMARCD2-210ENST00000584400 hCG_1807616A0A1W2PRN6 198 aa22.77■■□□□ 1.24
SMARCD2-210ENST00000584400 A8MXK9 166 aa22.77■■□□□ 1.24
SMARCD2-210ENST00000584400 RBMXP38159 391 aaKnown RBP22.77■■□□□ 1.24
SMARCD2-210ENST00000584400 SNRPGP62308 76 aaKnown RBP22.77■■□□□ 1.24
SMARCD2-210ENST00000584400 SLC25A30Q5SVS4 291 aa22.77■■□□□ 1.24
SMARCD2-210ENST00000584400 OR8B3Q8NGG8 313 aa22.77■■□□□ 1.24
SMARCD2-210ENST00000584400 LYZL4Q96KX0 146 aa22.77■■□□□ 1.24
SMARCD2-210ENST00000584400 OR8B2Q96RD0 313 aa22.77■■□□□ 1.24
SMARCD2-210ENST00000584400 APOL4Q9BPW4 351 aa22.77■■□□□ 1.24
SMARCD2-210ENST00000584400 RNPEPL1Q9HAU8 725 aa22.77■■□□□ 1.24
SMARCD2-210ENST00000584400 OR5V1Q9UGF6 321 aa22.77■■□□□ 1.24
SMARCD2-210ENST00000584400 GMPPBQ9Y5P6 360 aa22.77■■□□□ 1.24
SMARCD2-210ENST00000584400 SNX5Q9Y5X3 404 aa22.77■■□□□ 1.24
SMARCD2-210ENST00000584400 R4GMQ9 66 aa22.77■■□□□ 1.24
SMARCD2-210ENST00000584400 ANK3Q12955 4377 aaKnown RBP22.76■■□□□ 1.23
SMARCD2-210ENST00000584400 TRAV38-1A0A0B4J264 116 aa22.76■■□□□ 1.23
SMARCD2-210ENST00000584400 ZNF816-ZNF321PA0A0X1KG74 233 aa22.76■■□□□ 1.23
SMARCD2-210ENST00000584400 LGALS8O00214 317 aa22.76■■□□□ 1.23
SMARCD2-210ENST00000584400 NDUFA2O43678 99 aa22.76■■□□□ 1.23
SMARCD2-210ENST00000584400 PRDX4Q13162 271 aa22.76■■□□□ 1.23
SMARCD2-210ENST00000584400 THAP5Q7Z6K1 395 aa22.76■■□□□ 1.23
SMARCD2-210ENST00000584400 SEMA6DQ8NFY4 1073 aa22.76■■□□□ 1.23
SMARCD2-210ENST00000584400 OR1M1Q8NGA1 313 aa22.76■■□□□ 1.23
SMARCD2-210ENST00000584400 OR10H4Q8NGA5 316 aa22.76■■□□□ 1.23
SMARCD2-210ENST00000584400 PIGCQ92535 297 aa22.76■■□□□ 1.23
SMARCD2-210ENST00000584400 SSBP3Q9BWW4 388 aaPredicted RBP22.76■■□□□ 1.23
SMARCD2-210ENST00000584400 C7orf69Q9H7B7 122 aa22.76■■□□□ 1.23
SMARCD2-210ENST00000584400 GTF2A1LQ9UNN4 478 aa22.76■■□□□ 1.23
SMARCD2-210ENST00000584400 TMEM210A6NLX4 147 aa22.75■■□□□ 1.23
SMARCD2-210ENST00000584400 ZNF850A8MQ14 1090 aa22.75■■□□□ 1.23
SMARCD2-210ENST00000584400 PRR32B1ATL7 298 aa22.75■■□□□ 1.23
SMARCD2-210ENST00000584400 MPZL2O60487 215 aa22.75■■□□□ 1.23
SMARCD2-210ENST00000584400 SULT1C4O75897 302 aa22.75■■□□□ 1.23
SMARCD2-210ENST00000584400 ACKR3P25106 362 aa22.75■■□□□ 1.23
SMARCD2-210ENST00000584400 ZFP36P26651 326 aaKnown RBP22.75■■□□□ 1.23
SMARCD2-210ENST00000584400 MTNR1AP48039 350 aa22.75■■□□□ 1.23
SMARCD2-210ENST00000584400 GNB2P62879 340 aa22.75■■□□□ 1.23
SMARCD2-210ENST00000584400 RIPPLY1Q0D2K3 151 aa22.75■■□□□ 1.23
SMARCD2-210ENST00000584400 ZSCAN26Q16670 478 aa22.75■■□□□ 1.23
SMARCD2-210ENST00000584400 FAM201AQ5SY85 155 aa22.75■■□□□ 1.23
SMARCD2-210ENST00000584400 BCL2L15Q5TBC7 163 aa22.75■■□□□ 1.23
SMARCD2-210ENST00000584400 ZBTB37Q5TC79 503 aa22.75■■□□□ 1.23
SMARCD2-210ENST00000584400 ZDHHC23Q8IYP9 409 aa22.75■■□□□ 1.23
SMARCD2-210ENST00000584400 RFLNBQ8N5W9 214 aa22.75■■□□□ 1.23
SMARCD2-210ENST00000584400 ITPKCQ96DU7 683 aa22.75■■□□□ 1.23
SMARCD2-210ENST00000584400 TBX5Q99593 518 aa22.75■■□□□ 1.23
SMARCD2-210ENST00000584400 TMPRSS13Q9BYE2 586 aa22.75■■□□□ 1.23
SMARCD2-210ENST00000584400 GPR84Q9NQS5 396 aa22.75■■□□□ 1.23
SMARCD2-210ENST00000584400 OR52A1Q9UKL2 312 aa22.75■■□□□ 1.23
SMARCD2-210ENST00000584400 A0A1W2PQL4 384 aaPredicted RBP22.74■■□□□ 1.23
SMARCD2-210ENST00000584400 OCLNQ16625 522 aa22.74■■□□□ 1.23
SMARCD2-210ENST00000584400 YIPF7Q8N8F6 280 aa22.74■■□□□ 1.23
SMARCD2-210ENST00000584400 BOLLQ8N9W6 283 aaKnown RBP22.74■■□□□ 1.23
SMARCD2-210ENST00000584400 DEFB108BQ8NET1 73 aa22.74■■□□□ 1.23
SMARCD2-210ENST00000584400 OR51E1Q8TCB6 317 aa22.74■■□□□ 1.23
SMARCD2-210ENST00000584400 OR5P3Q8WZ94 311 aa22.74■■□□□ 1.23
SMARCD2-210ENST00000584400 METTL17Q9H7H0 456 aaPredicted RBP22.74■■□□□ 1.23
SMARCD2-210ENST00000584400 MRM2Q9UI43 246 aaKnown RBP22.74■■□□□ 1.23
SMARCD2-210ENST00000584400 OOEPA6NGQ2 149 aa22.73■■□□□ 1.23
SMARCD2-210ENST00000584400 IGLV3-1P01715 115 aa22.73■■□□□ 1.23
SMARCD2-210ENST00000584400 SEC61A1P61619 476 aaKnown RBP22.73■■□□□ 1.23
SMARCD2-210ENST00000584400 ACTC1P68032 377 aa22.73■■□□□ 1.23
SMARCD2-210ENST00000584400 ACTA1P68133 377 aa22.73■■□□□ 1.23
SMARCD2-210ENST00000584400 ZNF154Q13106 437 aa22.73■■□□□ 1.23
SMARCD2-210ENST00000584400 PLEKHG7Q6ZR37 379 aa22.73■■□□□ 1.23
SMARCD2-210ENST00000584400 KCTD8Q6ZWB6 473 aa22.73■■□□□ 1.23
SMARCD2-210ENST00000584400 KRT74Q7RTS7 529 aa22.73■■□□□ 1.23
SMARCD2-210ENST00000584400 FAM220AQ7Z4H9 259 aa22.73■■□□□ 1.23
SMARCD2-210ENST00000584400 ELMOD2Q8IZ81 293 aa22.73■■□□□ 1.23
SMARCD2-210ENST00000584400 NANPQ8TBE9 248 aa22.73■■□□□ 1.23
SMARCD2-210ENST00000584400 FAM71F1Q96KD3 344 aaPredicted RBP22.73■■□□□ 1.23
SMARCD2-210ENST00000584400 Q96MT0 163 aa22.73■■□□□ 1.23
SMARCD2-210ENST00000584400 MYCBPQ99417 103 aaPredicted RBP22.73■■□□□ 1.23
SMARCD2-210ENST00000584400 CLN8Q9UBY8 286 aa22.73■■□□□ 1.23
SMARCD2-210ENST00000584400 PCDHGB1Q9Y5G3 927 aa22.73■■□□□ 1.23
SMARCD2-210ENST00000584400 ABCA2Q9BZC7 2435 aa22.72■■□□□ 1.23
SMARCD2-210ENST00000584400 METTL15A6NJ78 407 aa22.72■■□□□ 1.23
SMARCD2-210ENST00000584400 E9PQ18 207 aa22.72■■□□□ 1.23
SMARCD2-210ENST00000584400 ENTPD6O75354 484 aa22.72■■□□□ 1.23
SMARCD2-210ENST00000584400 SRSF10O75494 262 aaKnown RBP22.72■■□□□ 1.23
SMARCD2-210ENST00000584400 DHRS3O75911 302 aa22.72■■□□□ 1.23
SMARCD2-210ENST00000584400 TTRP02766 147 aa22.72■■□□□ 1.23
SMARCD2-210ENST00000584400 PITPNBP48739 271 aa22.72■■□□□ 1.23
SMARCD2-210ENST00000584400 NPY4RP50391 375 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms