RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 OR4K13Q8NH42 304 aa10.88□□□□□ -0.67
COPS3-218ENST00000584216 SPSB4Q96A44 273 aa10.88□□□□□ -0.67
COPS3-218ENST00000584216 ITPKCQ96DU7 683 aa10.88□□□□□ -0.67
COPS3-218ENST00000584216 NKX3-1Q99801 234 aaPredicted RBP10.88□□□□□ -0.67
COPS3-218ENST00000584216 IFT27Q9BW83 186 aa10.88□□□□□ -0.67
COPS3-218ENST00000584216 HAO2Q9NYQ3 351 aa10.88□□□□□ -0.67
COPS3-218ENST00000584216 PLXNB1O43157 2135 aa10.87□□□□□ -0.67
COPS3-218ENST00000584216 TRBV23-1A0A0A0MS06 115 aa10.87□□□□□ -0.67
COPS3-218ENST00000584216 A0A1W2PPH5 198 aa10.87□□□□□ -0.67
COPS3-218ENST00000584216 ANXA2P2A6NMY6 339 aa10.87□□□□□ -0.67
COPS3-218ENST00000584216 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.87□□□□□ -0.67
COPS3-218ENST00000584216 ANGPTL7O43827 346 aa10.87□□□□□ -0.67
COPS3-218ENST00000584216 SERPINA1P01009 418 aa10.87□□□□□ -0.67
COPS3-218ENST00000584216 NDUFB7P17568 137 aa10.87□□□□□ -0.67
COPS3-218ENST00000584216 RHCEP18577 417 aa10.87□□□□□ -0.67
COPS3-218ENST00000584216 DLX1P56177 255 aa10.87□□□□□ -0.67
COPS3-218ENST00000584216 CSNK2BP67870 215 aa10.87□□□□□ -0.67
COPS3-218ENST00000584216 KRT72Q14CN4 511 aa10.87□□□□□ -0.67
COPS3-218ENST00000584216 TIGD6Q17RP2 521 aa10.87□□□□□ -0.67
COPS3-218ENST00000584216 CRIP3Q6Q6R5 217 aa10.87□□□□□ -0.67
COPS3-218ENST00000584216 ZDHHC21Q8IVQ6 265 aa10.87□□□□□ -0.67
COPS3-218ENST00000584216 C11orf53Q8IXP5 236 aa10.87□□□□□ -0.67
COPS3-218ENST00000584216 PROKR2Q8NFJ6 384 aa10.87□□□□□ -0.67
COPS3-218ENST00000584216 OR10Z1Q8NGY1 313 aa10.87□□□□□ -0.67
COPS3-218ENST00000584216 DUS3LQ96G46 650 aaKnown RBP10.87□□□□□ -0.67
COPS3-218ENST00000584216 ATP6V1G3Q96LB4 118 aa10.87□□□□□ -0.67
COPS3-218ENST00000584216 KCNJ15Q99712 375 aa10.87□□□□□ -0.67
COPS3-218ENST00000584216 MICU1Q9BPX6 476 aa10.87□□□□□ -0.67
COPS3-218ENST00000584216 OCSTAMPQ9BR26 566 aa10.87□□□□□ -0.67
COPS3-218ENST00000584216 CDCA4Q9BXL8 241 aa10.87□□□□□ -0.67
COPS3-218ENST00000584216 TLNRD1Q9H1K6 362 aa10.87□□□□□ -0.67
COPS3-218ENST00000584216 OR52D1Q9H346 318 aa10.87□□□□□ -0.67
COPS3-218ENST00000584216 ABCB9Q9NP78 766 aa10.87□□□□□ -0.67
COPS3-218ENST00000584216 MRPL22Q9NWU5 206 aaKnown RBP10.87□□□□□ -0.67
COPS3-218ENST00000584216 ZNF391Q9UJN7 358 aa10.87□□□□□ -0.67
COPS3-218ENST00000584216 OR6C68A6NDL8 312 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 CDIPTO14735 213 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 SIGLEC5O15389 551 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 EDF1O60869 148 aaKnown RBP10.86□□□□□ -0.67
COPS3-218ENST00000584216 ALDOBP05062 364 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 VSIG8P0DPA2 414 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 CD28P10747 220 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 SLC15A1P46059 708 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 PRKXP51817 358 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 LGALS4P56470 323 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 SMIM11AP58511 58 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 ELF3P78545 371 aaPredicted RBP10.86□□□□□ -0.67
COPS3-218ENST00000584216 SPIBQ01892 262 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 LIPEQ05469 1076 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 KLF10Q13118 480 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 ZNF788Q6ZQV5 615 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 DCXRQ7Z4W1 244 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 WDR86Q86TI4 376 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 PAPD5Q8NDF8 572 aaKnown RBP10.86□□□□□ -0.67
COPS3-218ENST00000584216 CSNK2A3Q8NEV1 391 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 SDR9C7Q8NEX9 313 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 OR5T2Q8NGG2 359 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 OR2T4Q8NH00 348 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 RORBQ92753 470 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 FAM162AQ96A26 154 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 WWC2-AS2Q96NR7 200 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 RAB3IPQ96QF0 476 aaPredicted RBP10.86□□□□□ -0.67
COPS3-218ENST00000584216 RTL8AQ9BWD3 113 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 PAPOLGQ9BWT3 736 aaKnown RBP10.86□□□□□ -0.67
COPS3-218ENST00000584216 HEXA-AS1Q9H8Q6 139 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 ADA2Q9NZK5 511 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 N6AMT1Q9Y5N5 214 aa10.86□□□□□ -0.67
COPS3-218ENST00000584216 TRBV4-1A0A0J9YWV2 114 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 LOC100653049A0A140TA62 436 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 hCG_1809904A0A1W2PP81 198 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 A0A1W2PPE2 198 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 A0A1W2PR64 198 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 A0A1W2PRV1 198 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 TMEM210A6NLX4 147 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 ZNF878C9JN71 531 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 NDUFAB1O14561 156 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 TBX1O43435 398 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 KRT34O76011 436 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 APOC1P02654 83 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 SLC2A1P11166 492 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 IFNGR2P38484 337 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 GRB2P62993 217 aaKnown RBP10.85□□□□□ -0.67
COPS3-218ENST00000584216 DGUOKQ16854 277 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 ZBTB37Q5TC79 503 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 SLC16A9Q7RTY1 509 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 Q8N2B8 174 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 WFDC9Q8NEX5 89 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 OR52H1Q8NGJ2 320 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 SEH1LQ96EE3 360 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 REEP6Q96HR9 211 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 CITED2Q99967 270 aaPredicted RBP10.85□□□□□ -0.67
COPS3-218ENST00000584216 FN3KQ9H479 309 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 CENPMQ9NSP4 180 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 CMTM6Q9NX76 183 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 NDUFAF4Q9P032 175 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 PITPNC1Q9UKF7 332 aa10.85□□□□□ -0.67
COPS3-218ENST00000584216 CHST1O43916 411 aa10.84□□□□□ -0.67
COPS3-218ENST00000584216 DUS4LO95620 317 aaKnown RBP10.84□□□□□ -0.67
COPS3-218ENST00000584216 ANXA2P07355 339 aaKnown RBP10.84□□□□□ -0.67
COPS3-218ENST00000584216 ACAA1P09110 424 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms