RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 SRPX2O60687 465 aaPredicted RBP10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 WNT11O96014 354 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 CLPSP04118 112 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 FOLR1P15328 257 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 IL12BP29460 328 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 GAGE1Q13065 139 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 HLA-BQ31612 363 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 SCGB2B2Q4G0G5 96 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 ABHD12BQ7Z5M8 362 aaPredicted RBP10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 EID2Q8N6I1 236 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 SLC25A28Q96A46 364 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 LMF2Q9BU23 707 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 ONECUT1Q9UBC0 465 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 GLS2Q9UI32 602 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 SERTAD3Q9UJW9 196 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 LRP4O75096 1905 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 TMEM272A0A1B0GTI8 110 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 A0A1B0GUH1 482 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 A0A1W2PNV4 684 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 SLC22A23A1A5C7 686 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 M0QZK8 103 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 DDAH2O95865 285 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 ITGA5P08648 1049 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 CD80P33681 288 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 DLSTP36957 453 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 SEC61A1P61619 476 aaKnown RBP10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 ZXDAP98168 799 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 ALG10Q5BKT4 473 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 VWA2Q5GFL6 755 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 GUSBP11Q6P575 273 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 FAM220AQ7Z4H9 259 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 FOXRED2Q8IWF2 684 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 SYS1Q8N2H4 156 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 OR1M1Q8NGA1 313 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 CFHR4Q92496 578 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 WBP1Q96G27 269 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 PDCD10Q9BUL8 212 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 OR8D2Q9GZM6 311 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 SHARPINQ9H0F6 387 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 NXF5Q9H1B4 397 aaKnown RBP10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 ATG5Q9H1Y0 275 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 ZNF552Q9H707 407 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 AUP1Q9Y679 476 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 A0A087WUJ7 227 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 PDCD5O14737 125 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 RBMXL2O75526 392 aaKnown RBP10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 UPK3AO75631 287 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 RPA2P15927 270 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 GLB1P16278 677 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 CD1CP29017 333 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 S100A11P31949 105 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 CSF2RBP32927 897 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 DEFA5Q01523 94 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 EGR4Q05215 589 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 Q499Y3 187 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 ZNF626Q68DY1 528 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 C16orf47Q6ZP98 133 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 CD163Q86VB7 1156 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 PLXDC1Q8IUK5 500 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 OR4S1Q8NGB4 309 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 OR5M8Q8NGP6 311 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 ZNF563Q8TA94 476 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 FAM222BQ8WU58 562 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 SLAMF9Q96A28 289 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 HAVCR1Q96D42 359 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 ALKBH3Q96Q83 286 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 ADOQ96SZ5 270 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 ALKBH7Q9BT30 221 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 ANGPTL4Q9BY76 406 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 Q9N2J8 555 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 TAS2R5Q9NYW4 299 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 CEP192Q8TEP8 1941 aa10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 PRRC2CQ9Y520 2896 aaKnown RBP10.32□□□□□ -0.76
CDK5RAP3-231ENST00000584063 FITM1A5D6W6 292 aa10.31□□□□□ -0.76
CDK5RAP3-231ENST00000584063 LILRA5A6NI73 299 aa10.31□□□□□ -0.76
CDK5RAP3-231ENST00000584063 C17orf105B2RV13 164 aa10.31□□□□□ -0.76
CDK5RAP3-231ENST00000584063 SULT1C2O00338 296 aa10.31□□□□□ -0.76
CDK5RAP3-231ENST00000584063 RP2O75695 350 aa10.31□□□□□ -0.76
CDK5RAP3-231ENST00000584063 NDUFB6O95139 128 aa10.31□□□□□ -0.76
CDK5RAP3-231ENST00000584063 MPZL1O95297 269 aa10.31□□□□□ -0.76
CDK5RAP3-231ENST00000584063 PF4P02776 101 aa10.31□□□□□ -0.76
CDK5RAP3-231ENST00000584063 ZNF28P17035 718 aa10.31□□□□□ -0.76
CDK5RAP3-231ENST00000584063 AGAP20933 346 aa10.31□□□□□ -0.76
CDK5RAP3-231ENST00000584063 HSD11B2P80365 405 aa10.31□□□□□ -0.76
CDK5RAP3-231ENST00000584063 PRTGQ2VWP7 1150 aa10.31□□□□□ -0.76
CDK5RAP3-231ENST00000584063 RNF212Q495C1 297 aa10.31□□□□□ -0.76
CDK5RAP3-231ENST00000584063 UNQ9370/PRO34162Q6UXP9 181 aa10.31□□□□□ -0.76
CDK5RAP3-231ENST00000584063 MARCH3Q86UD3 253 aa10.31□□□□□ -0.76
CDK5RAP3-231ENST00000584063 RTN4RL2Q86UN3 420 aa10.31□□□□□ -0.76
CDK5RAP3-231ENST00000584063 ADGRG3Q86Y34 549 aa10.31□□□□□ -0.76
CDK5RAP3-231ENST00000584063 C1orf210Q8IVY1 113 aa10.31□□□□□ -0.76
CDK5RAP3-231ENST00000584063 OR11L1Q8NGX0 322 aa10.31□□□□□ -0.76
CDK5RAP3-231ENST00000584063 LPAR4Q99677 370 aa10.31□□□□□ -0.76
CDK5RAP3-231ENST00000584063 TCEAL7Q9BRU2 100 aa10.31□□□□□ -0.76
CDK5RAP3-231ENST00000584063 MAGT1Q9H0U3 335 aa10.31□□□□□ -0.76
CDK5RAP3-231ENST00000584063 SLITRK2Q9H156 845 aa10.31□□□□□ -0.76
CDK5RAP3-231ENST00000584063 LHX6Q9UPM6 363 aa10.31□□□□□ -0.76
CDK5RAP3-231ENST00000584063 MRPS33Q9Y291 106 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-231ENST00000584063 NPTNQ9Y639 398 aa10.31□□□□□ -0.76
CDK5RAP3-231ENST00000584063 CLEC18AA5D8T8 446 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms