RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 GATA4P43694 442 aa18.29■□□□□ 0.52
TSEN54-208ENST00000583173 ALKBH1Q13686 389 aaKnown RBP18.29■□□□□ 0.52
TSEN54-208ENST00000583173 ZBTB37Q5TC79 503 aa18.29■□□□□ 0.52
TSEN54-208ENST00000583173 RDH10Q8IZV5 341 aa18.29■□□□□ 0.52
TSEN54-208ENST00000583173 GCM1Q9NP62 436 aa18.29■□□□□ 0.52
TSEN54-208ENST00000583173 ZNF275Q9NSD4 429 aaPredicted RBP18.29■□□□□ 0.52
TSEN54-208ENST00000583173 PAK1IP1Q9NWT1 392 aaPredicted RBP18.29■□□□□ 0.52
TSEN54-208ENST00000583173 ISG15P05161 165 aa18.28■□□□□ 0.52
TSEN54-208ENST00000583173 CDK1P06493 297 aa18.28■□□□□ 0.52
TSEN54-208ENST00000583173 HTR1AP08908 422 aa18.28■□□□□ 0.52
TSEN54-208ENST00000583173 CCDC159P0C7I6 412 aa18.28■□□□□ 0.52
TSEN54-208ENST00000583173 SLC25A16P16260 332 aa18.28■□□□□ 0.52
TSEN54-208ENST00000583173 TNFRSF1AP19438 455 aa18.28■□□□□ 0.52
TSEN54-208ENST00000583173 RBMXP38159 391 aaKnown RBP18.28■□□□□ 0.52
TSEN54-208ENST00000583173 TGM4P49221 684 aa18.28■□□□□ 0.52
TSEN54-208ENST00000583173 MRPL28Q13084 256 aaKnown RBP18.28■□□□□ 0.52
TSEN54-208ENST00000583173 HNRNPA0Q13151 305 aaKnown RBP18.28■□□□□ 0.52
TSEN54-208ENST00000583173 OR8G1Q15617 311 aa18.28■□□□□ 0.52
TSEN54-208ENST00000583173 OR2G6Q5TZ20 316 aa18.28■□□□□ 0.52
TSEN54-208ENST00000583173 TMEM42Q69YG0 159 aa18.28■□□□□ 0.52
TSEN54-208ENST00000583173 SPERTQ8NA61 448 aa18.28■□□□□ 0.52
TSEN54-208ENST00000583173 ZNF540Q8NDQ6 660 aa18.28■□□□□ 0.52
TSEN54-208ENST00000583173 SEMA6DQ8NFY4 1073 aa18.28■□□□□ 0.52
TSEN54-208ENST00000583173 OR52N1Q8NH53 320 aa18.28■□□□□ 0.52
TSEN54-208ENST00000583173 RPS4Y2Q8TD47 263 aa18.28■□□□□ 0.52
TSEN54-208ENST00000583173 SGCDQ92629 289 aa18.28■□□□□ 0.52
TSEN54-208ENST00000583173 FAM71F1Q96KD3 344 aaPredicted RBP18.28■□□□□ 0.52
TSEN54-208ENST00000583173 FGF23Q9GZV9 251 aaPredicted RBP18.28■□□□□ 0.52
TSEN54-208ENST00000583173 UBAP1Q9NZ09 502 aa18.28■□□□□ 0.52
TSEN54-208ENST00000583173 GTF2A1LQ9UNN4 478 aa18.28■□□□□ 0.52
TSEN54-208ENST00000583173 NOP16Q9Y3C1 178 aaKnown RBP18.28■□□□□ 0.52
TSEN54-208ENST00000583173 MPC1Q9Y5U8 109 aa18.28■□□□□ 0.52
TSEN54-208ENST00000583173 DHRS7CA6NNS2 312 aa18.27■□□□□ 0.52
TSEN54-208ENST00000583173 RNF223E7ERA6 249 aa18.27■□□□□ 0.52
TSEN54-208ENST00000583173 H7C1Q1 480 aa18.27■□□□□ 0.52
TSEN54-208ENST00000583173 TPD52L2O43399 206 aaKnown RBP18.27■□□□□ 0.52
TSEN54-208ENST00000583173 MTRF1O75570 445 aaKnown RBP18.27■□□□□ 0.52
TSEN54-208ENST00000583173 CD99P14209 185 aa18.27■□□□□ 0.52
TSEN54-208ENST00000583173 FOSL1P15407 271 aa18.27■□□□□ 0.52
TSEN54-208ENST00000583173 SRP9P49458 86 aaKnown RBP18.27■□□□□ 0.52
TSEN54-208ENST00000583173 SLC35A2P78381 396 aa18.27■□□□□ 0.52
TSEN54-208ENST00000583173 RIPPLY1Q0D2K3 151 aa18.27■□□□□ 0.52
TSEN54-208ENST00000583173 SNCBQ16143 134 aa18.27■□□□□ 0.52
TSEN54-208ENST00000583173 AHSA2Q719I0 299 aa18.27■□□□□ 0.52
TSEN54-208ENST00000583173 DOK3Q7L591 496 aa18.27■□□□□ 0.52
TSEN54-208ENST00000583173 ITPKCQ96DU7 683 aa18.27■□□□□ 0.52
TSEN54-208ENST00000583173 COX4I2Q96KJ9 171 aa18.27■□□□□ 0.52
TSEN54-208ENST00000583173 BPESC1Q9GZL8 116 aa18.27■□□□□ 0.52
TSEN54-208ENST00000583173 DCAF16Q9NXF7 216 aa18.27■□□□□ 0.52
TSEN54-208ENST00000583173 BABAM2Q9NXR7 383 aa18.27■□□□□ 0.52
TSEN54-208ENST00000583173 TREM2Q9NZC2 230 aa18.27■□□□□ 0.52
TSEN54-208ENST00000583173 SIRT4Q9Y6E7 314 aaPredicted RBP18.27■□□□□ 0.52
TSEN54-208ENST00000583173 F8P00451 2351 aa18.27■□□□□ 0.52
TSEN54-208ENST00000583173 ZNF816-ZNF321PA0A0X1KG74 233 aa18.26■□□□□ 0.51
TSEN54-208ENST00000583173 PTGES3LE9PB15 166 aa18.26■□□□□ 0.51
TSEN54-208ENST00000583173 OGG1O15527 345 aa18.26■□□□□ 0.51
TSEN54-208ENST00000583173 CRHBPP24387 322 aa18.26■□□□□ 0.51
TSEN54-208ENST00000583173 GTF2A1P52655 376 aaPredicted RBP18.26■□□□□ 0.51
TSEN54-208ENST00000583173 GBX2P52951 348 aaPredicted RBP18.26■□□□□ 0.51
TSEN54-208ENST00000583173 LOXL1Q08397 574 aaPredicted RBP18.26■□□□□ 0.51
TSEN54-208ENST00000583173 DOC2BQ14184 412 aa18.26■□□□□ 0.51
TSEN54-208ENST00000583173 IRF3Q14653 427 aa18.26■□□□□ 0.51
TSEN54-208ENST00000583173 CARTPTQ16568 116 aa18.26■□□□□ 0.51
TSEN54-208ENST00000583173 CCDC58Q4VC31 144 aa18.26■□□□□ 0.51
TSEN54-208ENST00000583173 FAM76BQ5HYJ3 339 aa18.26■□□□□ 0.51
TSEN54-208ENST00000583173 TMEM244Q5VVB8 128 aa18.26■□□□□ 0.51
TSEN54-208ENST00000583173 TMPRSS11AQ6ZMR5 421 aa18.26■□□□□ 0.51
TSEN54-208ENST00000583173 WDR86Q86TI4 376 aa18.26■□□□□ 0.51
TSEN54-208ENST00000583173 C11orf53Q8IXP5 236 aa18.26■□□□□ 0.51
TSEN54-208ENST00000583173 STX19Q8N4C7 294 aa18.26■□□□□ 0.51
TSEN54-208ENST00000583173 KLHL36Q8N4N3 616 aa18.26■□□□□ 0.51
TSEN54-208ENST00000583173 NANOGP1Q8N7R0 232 aa18.26■□□□□ 0.51
TSEN54-208ENST00000583173 CCDC54Q8NEL0 328 aa18.26■□□□□ 0.51
TSEN54-208ENST00000583173 HAVCR2Q8TDQ0 301 aa18.26■□□□□ 0.51
TSEN54-208ENST00000583173 OR5P3Q8WZ94 311 aa18.26■□□□□ 0.51
TSEN54-208ENST00000583173 CCL17Q92583 94 aa18.26■□□□□ 0.51
TSEN54-208ENST00000583173 DVL3Q92997 716 aaPredicted RBP18.26■□□□□ 0.51
TSEN54-208ENST00000583173 CNBD2Q96M20 576 aa18.26■□□□□ 0.51
TSEN54-208ENST00000583173 PIMREGQ9BSJ6 248 aa18.26■□□□□ 0.51
TSEN54-208ENST00000583173 ADAT1Q9BUB4 502 aaKnown RBP18.26■□□□□ 0.51
TSEN54-208ENST00000583173 CDCA4Q9BXL8 241 aa18.26■□□□□ 0.51
TSEN54-208ENST00000583173 SCN3BQ9NY72 215 aa18.26■□□□□ 0.51
TSEN54-208ENST00000583173 ZANQ9Y493 2812 aa18.26■□□□□ 0.51
TSEN54-208ENST00000583173 ZNF850A8MQ14 1090 aa18.25■□□□□ 0.51
TSEN54-208ENST00000583173 LALBAP00709 142 aa18.25■□□□□ 0.51
TSEN54-208ENST00000583173 MYL12AP19105 171 aa18.25■□□□□ 0.51
TSEN54-208ENST00000583173 PRDX4Q13162 271 aa18.25■□□□□ 0.51
TSEN54-208ENST00000583173 ODF4Q2M2E3 257 aa18.25■□□□□ 0.51
TSEN54-208ENST00000583173 ZNF181Q2M3W8 571 aa18.25■□□□□ 0.51
TSEN54-208ENST00000583173 HFEQ30201 348 aa18.25■□□□□ 0.51
TSEN54-208ENST00000583173 XAF1Q6GPH4 301 aa18.25■□□□□ 0.51
TSEN54-208ENST00000583173 Q8TCH9 128 aa18.25■□□□□ 0.51
TSEN54-208ENST00000583173 GATAD2BQ8WXI9 593 aa18.25■□□□□ 0.51
TSEN54-208ENST00000583173 PIGCQ92535 297 aa18.25■□□□□ 0.51
TSEN54-208ENST00000583173 ERGIC1Q969X5 290 aa18.25■□□□□ 0.51
TSEN54-208ENST00000583173 TMEM106BQ9NUM4 274 aa18.25■□□□□ 0.51
TSEN54-208ENST00000583173 PPP1R3CQ9UQK1 317 aa18.25■□□□□ 0.51
TSEN54-208ENST00000583173 PIGLQ9Y2B2 252 aa18.25■□□□□ 0.51
TSEN54-208ENST00000583173 IGHV4-61A0A0C4DH41 118 aa18.24■□□□□ 0.51
TSEN54-208ENST00000583173 SYT7O43581 403 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms