RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 NAA10P41227 235 aaPredicted RBP8.71□□□□□ -1.02
RFFL-209ENST00000581265 GSK3AP49840 483 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 GRB2P62993 217 aaKnown RBP8.71□□□□□ -1.02
RFFL-209ENST00000581265 GUCA2AQ02747 115 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 CRMP1Q14194 572 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 WDR38Q5JTN6 314 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 LINC01590Q5TEZ4 76 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 C1orf122Q6ZSJ8 110 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 Q6ZSV7 163 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 DPY19L4Q7Z388 723 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 PDZD9Q8IXQ8 264 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 CMTM4Q8IZR5 234 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 FGFRL1Q8N441 504 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 GALNT4Q8N4A0 578 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 OR9Q2Q8NGE9 314 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 C8orf46Q8TAG6 207 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 REEP6Q96HR9 211 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 TSSK6Q9BXA6 273 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 DNTTIP1Q9H147 329 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 TCF7L1Q9HCS4 588 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 MED4Q9NPJ6 270 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 PRPF19Q9UMS4 504 aaKnown RBP8.71□□□□□ -1.02
RFFL-209ENST00000581265 hCG_38984A0A1B0GV85 526 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 A0A1B0GW55 424 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 RNASEK-C17orf49H0YIS7 233 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 ACOT8O14734 319 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 CDIPTO14735 213 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 TBX1O43435 398 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 NDUFB3O43676 98 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 SNX3O60493 162 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 GYPBP06028 91 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 ANXA2P07355 339 aaKnown RBP8.7□□□□□ -1.02
RFFL-209ENST00000581265 DUX4L2P0CJ85 424 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 DUX4L3P0CJ86 424 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 DUX4L4P0CJ87 422 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 DUX4L5P0CJ88 424 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 DUX4L6P0CJ89 424 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 DUX4L7P0CJ90 424 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 CLUP10909 449 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 TGFBR2P37173 567 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 MAGEA2P43356 314 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 CX3CR1P49238 355 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 CSNK2BP67870 215 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 ELF3P78545 371 aaPredicted RBP8.7□□□□□ -1.02
RFFL-209ENST00000581265 SNCBQ16143 134 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 TIGD6Q17RP2 521 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 KLHL12Q53G59 568 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 FAM76BQ5HYJ3 339 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 DUX4L9Q6RFH8 374 aaPredicted RBP8.7□□□□□ -1.02
RFFL-209ENST00000581265 FAM216BQ8N7L0 139 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 Q8N7P7 452 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 CSNK2A3Q8NEV1 391 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 OR2T33Q8NG76 320 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 OR4Q3Q8NH05 313 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 RNF133Q8WVZ7 376 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 TNFRSF14Q92956 283 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 ITPKCQ96DU7 683 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 SEH1LQ96EE3 360 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 DCTN5Q9BTE1 182 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 ABHD6Q9BV23 337 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 RGCCQ9H4X1 137 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 PPP1R3EQ9H7J1 279 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 TBC1D23Q9NUY8 699 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 HAO2Q9NYQ3 351 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 ZNRD1Q9P1U0 126 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 ZNF319Q9P2F9 582 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 ONECUT1Q9UBC0 465 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 DUX4Q9UBX2 424 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 VPREB3Q9UKI3 123 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 RHBDD3Q9Y3P4 386 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 CMYA5Q8N3K9 4069 aa8.7□□□□□ -1.02
RFFL-209ENST00000581265 PRKDCP78527 4128 aaKnown RBP8.69□□□□□ -1.02
RFFL-209ENST00000581265 ZNF816-ZNF321PA0A0X1KG74 233 aa8.69□□□□□ -1.02
RFFL-209ENST00000581265 BTBD17A6NE02 478 aa8.69□□□□□ -1.02
RFFL-209ENST00000581265 NPFFO15130 113 aa8.69□□□□□ -1.02
RFFL-209ENST00000581265 CCNB2O95067 398 aa8.69□□□□□ -1.02
RFFL-209ENST00000581265 IFNGP01579 166 aa8.69□□□□□ -1.02
RFFL-209ENST00000581265 VSIG8P0DPA2 414 aa8.69□□□□□ -1.02
RFFL-209ENST00000581265 EEF1B2P24534 225 aaKnown RBP8.69□□□□□ -1.02
RFFL-209ENST00000581265 HSD11B1P28845 292 aa8.69□□□□□ -1.02
RFFL-209ENST00000581265 GNALP38405 381 aa8.69□□□□□ -1.02
RFFL-209ENST00000581265 OPRL1P41146 370 aa8.69□□□□□ -1.02
RFFL-209ENST00000581265 ZNF121P58317 390 aaPredicted RBP8.69□□□□□ -1.02
RFFL-209ENST00000581265 IL5RAQ01344 420 aa8.69□□□□□ -1.02
RFFL-209ENST00000581265 EIF2B1Q14232 305 aaKnown RBP8.69□□□□□ -1.02
RFFL-209ENST00000581265 MICAQ29983 383 aa8.69□□□□□ -1.02
RFFL-209ENST00000581265 LRRC10Q5BKY1 277 aa8.69□□□□□ -1.02
RFFL-209ENST00000581265 STUMQ69YW2 141 aa8.69□□□□□ -1.02
RFFL-209ENST00000581265 FAM57BQ71RH2 274 aa8.69□□□□□ -1.02
RFFL-209ENST00000581265 FTMTQ8N4E7 242 aa8.69□□□□□ -1.02
RFFL-209ENST00000581265 AQP11Q8NBQ7 271 aa8.69□□□□□ -1.02
RFFL-209ENST00000581265 OR5T2Q8NGG2 359 aa8.69□□□□□ -1.02
RFFL-209ENST00000581265 OR6K6Q8NGW6 343 aa8.69□□□□□ -1.02
RFFL-209ENST00000581265 OR10Z1Q8NGY1 313 aa8.69□□□□□ -1.02
RFFL-209ENST00000581265 OR5R1Q8NH85 324 aa8.69□□□□□ -1.02
RFFL-209ENST00000581265 RAB3IPQ96QF0 476 aaPredicted RBP8.69□□□□□ -1.02
RFFL-209ENST00000581265 MICU1Q9BPX6 476 aa8.69□□□□□ -1.02
RFFL-209ENST00000581265 PAPOLGQ9BWT3 736 aaKnown RBP8.69□□□□□ -1.02
RFFL-209ENST00000581265 DGCR6LQ9BY27 220 aa8.69□□□□□ -1.02
RFFL-209ENST00000581265 OR10A2Q9H208 303 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms