RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 FCN3O75636 299 aa17.66■□□□□ 0.42
CSNK1D-216ENST00000581108 HCCSP53701 268 aa17.66■□□□□ 0.42
CSNK1D-216ENST00000581108 CSNK2BP67870 215 aa17.66■□□□□ 0.42
CSNK1D-216ENST00000581108 SLC9A3R2Q15599 337 aa17.66■□□□□ 0.42
CSNK1D-216ENST00000581108 LRRC29Q8WV35 223 aa17.66■□□□□ 0.42
CSNK1D-216ENST00000581108 ZMAT3Q9HA38 289 aaKnown RBP17.66■□□□□ 0.42
CSNK1D-216ENST00000581108 RNPEPL1Q9HAU8 725 aa17.66■□□□□ 0.42
CSNK1D-216ENST00000581108 FAM53CQ9NYF3 392 aa17.66■□□□□ 0.42
CSNK1D-216ENST00000581108 DNAJC8O75937 253 aaPredicted RBP17.65■□□□□ 0.42
CSNK1D-216ENST00000581108 SFTPBP07988 381 aa17.65■□□□□ 0.42
CSNK1D-216ENST00000581108 RNASE1P07998 156 aaKnown RBP17.65■□□□□ 0.42
CSNK1D-216ENST00000581108 SLC2A5P22732 501 aa17.65■□□□□ 0.42
CSNK1D-216ENST00000581108 GNALP38405 381 aa17.65■□□□□ 0.42
CSNK1D-216ENST00000581108 RPS7P62081 194 aaKnown RBP17.65■□□□□ 0.42
CSNK1D-216ENST00000581108 ELF3P78545 371 aaPredicted RBP17.65■□□□□ 0.42
CSNK1D-216ENST00000581108 FOXL1Q12952 345 aa17.65■□□□□ 0.42
CSNK1D-216ENST00000581108 SLC35D3Q5M8T2 416 aa17.65■□□□□ 0.42
CSNK1D-216ENST00000581108 TEX36Q5VZQ5 186 aa17.65■□□□□ 0.42
CSNK1D-216ENST00000581108 CSNK2A3Q8NEV1 391 aa17.65■□□□□ 0.42
CSNK1D-216ENST00000581108 SLC25A28Q96A46 364 aa17.65■□□□□ 0.42
CSNK1D-216ENST00000581108 PAPOLGQ9BWT3 736 aaKnown RBP17.65■□□□□ 0.42
CSNK1D-216ENST00000581108 RGCCQ9H4X1 137 aa17.65■□□□□ 0.42
CSNK1D-216ENST00000581108 SLC25A19Q9HC21 320 aa17.65■□□□□ 0.42
CSNK1D-216ENST00000581108 ZNF879B4DU55 563 aa17.64■□□□□ 0.41
CSNK1D-216ENST00000581108 CLDN34H7C241 214 aa17.64■□□□□ 0.41
CSNK1D-216ENST00000581108 DVL1O14640 695 aa17.64■□□□□ 0.41
CSNK1D-216ENST00000581108 TMPRSS2O15393 492 aa17.64■□□□□ 0.41
CSNK1D-216ENST00000581108 LIPFP07098 398 aa17.64■□□□□ 0.41
CSNK1D-216ENST00000581108 ACKR3P25106 362 aa17.64■□□□□ 0.41
CSNK1D-216ENST00000581108 DEFB112Q30KQ8 113 aa17.64■□□□□ 0.41
CSNK1D-216ENST00000581108 GPR157Q5UAW9 335 aa17.64■□□□□ 0.41
CSNK1D-216ENST00000581108 WDR82Q6UXN9 313 aa17.64■□□□□ 0.41
CSNK1D-216ENST00000581108 TAF15Q92804 592 aaKnown RBP eCLIP17.64■□□□□ 0.41
CSNK1D-216ENST00000581108 ITPKCQ96DU7 683 aa17.64■□□□□ 0.41
CSNK1D-216ENST00000581108 SEH1LQ96EE3 360 aa17.64■□□□□ 0.41
CSNK1D-216ENST00000581108 LYZL4Q96KX0 146 aa17.64■□□□□ 0.41
CSNK1D-216ENST00000581108 PCDHGB1Q9Y5G3 927 aa17.64■□□□□ 0.41
CSNK1D-216ENST00000581108 CDIPTO14735 213 aa17.63■□□□□ 0.41
CSNK1D-216ENST00000581108 TIPRLO75663 272 aa17.63■□□□□ 0.41
CSNK1D-216ENST00000581108 TOX4O94842 621 aa17.63■□□□□ 0.41
CSNK1D-216ENST00000581108 ALOX5APP20292 161 aa17.63■□□□□ 0.41
CSNK1D-216ENST00000581108 CFHR2P36980 270 aa17.63■□□□□ 0.41
CSNK1D-216ENST00000581108 APOFQ13790 326 aa17.63■□□□□ 0.41
CSNK1D-216ENST00000581108 SNAPC1Q16533 368 aa17.63■□□□□ 0.41
CSNK1D-216ENST00000581108 MICBQ29980 383 aa17.63■□□□□ 0.41
CSNK1D-216ENST00000581108 RUSC1-AS1Q66K80 236 aa17.63■□□□□ 0.41
CSNK1D-216ENST00000581108 BTN2A1Q7KYR7 527 aa17.63■□□□□ 0.41
CSNK1D-216ENST00000581108 FGFRL1Q8N441 504 aa17.63■□□□□ 0.41
CSNK1D-216ENST00000581108 GALNT4Q8N4A0 578 aa17.63■□□□□ 0.41
CSNK1D-216ENST00000581108 PNLDC1Q8NA58 520 aaKnown RBP17.63■□□□□ 0.41
CSNK1D-216ENST00000581108 OR8B12Q8NGG6 310 aa17.63■□□□□ 0.41
CSNK1D-216ENST00000581108 WDFY2Q96P53 400 aa17.63■□□□□ 0.41
CSNK1D-216ENST00000581108 TBX15Q96SF7 602 aa17.63■□□□□ 0.41
CSNK1D-216ENST00000581108 CCL13Q99616 98 aa17.63■□□□□ 0.41
CSNK1D-216ENST00000581108 MICU1Q9BPX6 476 aa17.63■□□□□ 0.41
CSNK1D-216ENST00000581108 TEX12Q9BXU0 123 aa17.63■□□□□ 0.41
CSNK1D-216ENST00000581108 TVP23BQ9NYZ1 205 aa17.63■□□□□ 0.41
CSNK1D-216ENST00000581108 KAAG1Q9UBP8 84 aa17.63■□□□□ 0.41
CSNK1D-216ENST00000581108 LAMP5Q9UJQ1 280 aa17.63■□□□□ 0.41
CSNK1D-216ENST00000581108 LRP12Q9Y561 859 aa17.63■□□□□ 0.41
CSNK1D-216ENST00000581108 A0A1B0GW55 424 aa17.62■□□□□ 0.41
CSNK1D-216ENST00000581108 ZNF850A8MQ14 1090 aa17.62■□□□□ 0.41
CSNK1D-216ENST00000581108 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.62■□□□□ 0.41
CSNK1D-216ENST00000581108 GSC2O15499 205 aa17.62■□□□□ 0.41
CSNK1D-216ENST00000581108 DUX4L2P0CJ85 424 aa17.62■□□□□ 0.41
CSNK1D-216ENST00000581108 DUX4L3P0CJ86 424 aa17.62■□□□□ 0.41
CSNK1D-216ENST00000581108 DUX4L4P0CJ87 422 aa17.62■□□□□ 0.41
CSNK1D-216ENST00000581108 DUX4L5P0CJ88 424 aa17.62■□□□□ 0.41
CSNK1D-216ENST00000581108 DUX4L6P0CJ89 424 aa17.62■□□□□ 0.41
CSNK1D-216ENST00000581108 DUX4L7P0CJ90 424 aa17.62■□□□□ 0.41
CSNK1D-216ENST00000581108 MMP9P14780 707 aa17.62■□□□□ 0.41
CSNK1D-216ENST00000581108 DAPP51397 102 aa17.62■□□□□ 0.41
CSNK1D-216ENST00000581108 CRISP1P54107 249 aa17.62■□□□□ 0.41
CSNK1D-216ENST00000581108 PRDX4Q13162 271 aa17.62■□□□□ 0.41
CSNK1D-216ENST00000581108 DUX4L9Q6RFH8 374 aaPredicted RBP17.62■□□□□ 0.41
CSNK1D-216ENST00000581108 KRT77Q7Z794 578 aa17.62■□□□□ 0.41
CSNK1D-216ENST00000581108 FTMTQ8N4E7 242 aa17.62■□□□□ 0.41
CSNK1D-216ENST00000581108 PIGCQ92535 297 aa17.62■□□□□ 0.41
CSNK1D-216ENST00000581108 NRBF2Q96F24 287 aa17.62■□□□□ 0.41
CSNK1D-216ENST00000581108 TEAD3Q99594 435 aa17.62■□□□□ 0.41
CSNK1D-216ENST00000581108 CADM1Q9BY67 442 aaKnown RBP17.62■□□□□ 0.41
CSNK1D-216ENST00000581108 TLNRD1Q9H1K6 362 aa17.62■□□□□ 0.41
CSNK1D-216ENST00000581108 NIPAL2Q9H841 368 aa17.62■□□□□ 0.41
CSNK1D-216ENST00000581108 PAPOLBQ9NRJ5 636 aaKnown RBP17.62■□□□□ 0.41
CSNK1D-216ENST00000581108 DUX4Q9UBX2 424 aa17.62■□□□□ 0.41
CSNK1D-216ENST00000581108 MPC1Q9Y5U8 109 aa17.62■□□□□ 0.41
CSNK1D-216ENST00000581108 CENPVL3A0A0U1RRI6 287 aa17.61■□□□□ 0.41
CSNK1D-216ENST00000581108 ANXA2P2A6NMY6 339 aa17.61■□□□□ 0.41
CSNK1D-216ENST00000581108 PSMD9O00233 223 aa17.61■□□□□ 0.41
CSNK1D-216ENST00000581108 P2RY10O00398 339 aa17.61■□□□□ 0.41
CSNK1D-216ENST00000581108 HOXA3O43365 443 aaPredicted RBP17.61■□□□□ 0.41
CSNK1D-216ENST00000581108 CST4P01036 141 aa17.61■□□□□ 0.41
CSNK1D-216ENST00000581108 MUC1P15941 1255 aaPredicted RBP17.61■□□□□ 0.41
CSNK1D-216ENST00000581108 BPIFB3P59826 476 aa17.61■□□□□ 0.41
CSNK1D-216ENST00000581108 PSMA6P60900 246 aaKnown RBP17.61■□□□□ 0.41
CSNK1D-216ENST00000581108 ARF6P62330 175 aa17.61■□□□□ 0.41
CSNK1D-216ENST00000581108 IL5RAQ01344 420 aa17.61■□□□□ 0.41
CSNK1D-216ENST00000581108 SNCBQ16143 134 aa17.61■□□□□ 0.41
CSNK1D-216ENST00000581108 WDR38Q5JTN6 314 aa17.61■□□□□ 0.41
CSNK1D-216ENST00000581108 FAHD1Q6P587 224 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms