RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 PLPP2O43688 288 aa16.38■□□□□ 0.21
SS18-209ENST00000578595 DCTDP32321 178 aa16.38■□□□□ 0.21
SS18-209ENST00000578595 CD80P33681 288 aa16.38■□□□□ 0.21
SS18-209ENST00000578595 PMELP40967 661 aa16.38■□□□□ 0.21
SS18-209ENST00000578595 MAP2K3P46734 347 aa16.38■□□□□ 0.21
SS18-209ENST00000578595 MTNR1AP48039 350 aa16.38■□□□□ 0.21
SS18-209ENST00000578595 EGR3Q06889 387 aa16.38■□□□□ 0.21
SS18-209ENST00000578595 PRDX4Q13162 271 aa16.38■□□□□ 0.21
SS18-209ENST00000578595 TMED1Q13445 227 aa16.38■□□□□ 0.21
SS18-209ENST00000578595 OR8B8Q15620 311 aa16.38■□□□□ 0.21
SS18-209ENST00000578595 MEDAGQ5VYS4 303 aa16.38■□□□□ 0.21
SS18-209ENST00000578595 LRRC28Q86X40 367 aaPredicted RBP16.38■□□□□ 0.21
SS18-209ENST00000578595 DEFB108BQ8NET1 73 aa16.38■□□□□ 0.21
SS18-209ENST00000578595 HIST1H2AAQ96QV6 131 aa16.38■□□□□ 0.21
SS18-209ENST00000578595 PATZ1Q9HBE1 687 aaKnown RBP16.38■□□□□ 0.21
SS18-209ENST00000578595 RNF7Q9UBF6 113 aa16.38■□□□□ 0.21
SS18-209ENST00000578595 NUFIP1Q9UHK0 495 aaKnown RBP16.38■□□□□ 0.21
SS18-209ENST00000578595 MRM2Q9UI43 246 aaKnown RBP16.38■□□□□ 0.21
SS18-209ENST00000578595 GNG8Q9UK08 70 aa16.38■□□□□ 0.21
SS18-209ENST00000578595 R4GMQ9 66 aa16.38■□□□□ 0.21
SS18-209ENST00000578595 ANK3Q12955 4377 aaKnown RBP16.38■□□□□ 0.21
SS18-209ENST00000578595 ACOD1A6NK06 481 aa16.37■□□□□ 0.21
SS18-209ENST00000578595 IFNA2P01563 188 aa16.37■□□□□ 0.21
SS18-209ENST00000578595 FAM157CP0CG43 387 aa16.37■□□□□ 0.21
SS18-209ENST00000578595 ACKR3P25106 362 aa16.37■□□□□ 0.21
SS18-209ENST00000578595 SNRPGP62308 76 aaKnown RBP16.37■□□□□ 0.21
SS18-209ENST00000578595 IL5RAQ01344 420 aa16.37■□□□□ 0.21
SS18-209ENST00000578595 GABPB1Q06547 395 aaPredicted RBP16.37■□□□□ 0.21
SS18-209ENST00000578595 ODF4Q2M2E3 257 aa16.37■□□□□ 0.21
SS18-209ENST00000578595 ZNF181Q2M3W8 571 aa16.37■□□□□ 0.21
SS18-209ENST00000578595 ESCO2Q56NI9 601 aa16.37■□□□□ 0.21
SS18-209ENST00000578595 DCAF12L2Q5VW00 463 aa16.37■□□□□ 0.21
SS18-209ENST00000578595 LPCAT4Q643R3 524 aa16.37■□□□□ 0.21
SS18-209ENST00000578595 ZNF826PQ6ZT77 177 aa16.37■□□□□ 0.21
SS18-209ENST00000578595 ZDHHC23Q8IYP9 409 aa16.37■□□□□ 0.21
SS18-209ENST00000578595 PPP1R14AQ96A00 147 aa16.37■□□□□ 0.21
SS18-209ENST00000578595 RTL8AQ9BWD3 113 aa16.37■□□□□ 0.21
SS18-209ENST00000578595 PPP1R3EQ9H7J1 279 aa16.37■□□□□ 0.21
SS18-209ENST00000578595 SMPD3Q9NY59 655 aaPredicted RBP16.37■□□□□ 0.21
SS18-209ENST00000578595 OR52A1Q9UKL2 312 aa16.37■□□□□ 0.21
SS18-209ENST00000578595 A0A0G2JMP0 313 aa16.36■□□□□ 0.21
SS18-209ENST00000578595 A0A0U1RQV5 110 aa16.36■□□□□ 0.21
SS18-209ENST00000578595 A0A0X1KG70 313 aa16.36■□□□□ 0.21
SS18-209ENST00000578595 LOC100130705A0A1B0GUX0 176 aa16.36■□□□□ 0.21
SS18-209ENST00000578595 DAPL1A0PJW8 107 aa16.36■□□□□ 0.21
SS18-209ENST00000578595 METTL15A6NJ78 407 aa16.36■□□□□ 0.21
SS18-209ENST00000578595 CEACAM18A8MTB9 384 aa16.36■□□□□ 0.21
SS18-209ENST00000578595 C3orf80F5H4A9 247 aa16.36■□□□□ 0.21
SS18-209ENST00000578595 MPZL2O60487 215 aa16.36■□□□□ 0.21
SS18-209ENST00000578595 FOXH1O75593 365 aa16.36■□□□□ 0.21
SS18-209ENST00000578595 PNPP00491 289 aa16.36■□□□□ 0.21
SS18-209ENST00000578595 SEC61A1P61619 476 aaKnown RBP16.36■□□□□ 0.21
SS18-209ENST00000578595 ACTC1P68032 377 aa16.36■□□□□ 0.21
SS18-209ENST00000578595 ACTA1P68133 377 aa16.36■□□□□ 0.21
SS18-209ENST00000578595 OCLNQ16625 522 aa16.36■□□□□ 0.21
SS18-209ENST00000578595 SFRP4Q6FHJ7 346 aaPredicted RBP16.36■□□□□ 0.21
SS18-209ENST00000578595 ENTHD1Q8IYW4 607 aa16.36■□□□□ 0.21
SS18-209ENST00000578595 SEMA6DQ8NFY4 1073 aa16.36■□□□□ 0.21
SS18-209ENST00000578595 OR4M2Q8NGB6 313 aa16.36■□□□□ 0.21
SS18-209ENST00000578595 Q8TCH9 128 aa16.36■□□□□ 0.21
SS18-209ENST00000578595 CYGBQ8WWM9 190 aa16.36■□□□□ 0.21
SS18-209ENST00000578595 Q96MT0 163 aa16.36■□□□□ 0.21
SS18-209ENST00000578595 ABCB9Q9NP78 766 aa16.36■□□□□ 0.21
SS18-209ENST00000578595 FAM118AQ9NWS6 357 aa16.36■□□□□ 0.21
SS18-209ENST00000578595 PIGLQ9Y2B2 252 aa16.36■□□□□ 0.21
SS18-209ENST00000578595 MPC1Q9Y5U8 109 aa16.36■□□□□ 0.21
SS18-209ENST00000578595 SNX5Q9Y5X3 404 aa16.36■□□□□ 0.21
SS18-209ENST00000578595 ZNF816-ZNF321PA0A0X1KG74 233 aa16.35■□□□□ 0.21
SS18-209ENST00000578595 H3BSH0 61 aa16.35■□□□□ 0.21
SS18-209ENST00000578595 P2RY10O00398 339 aa16.35■□□□□ 0.21
SS18-209ENST00000578595 MTRF1O75570 445 aaKnown RBP16.35■□□□□ 0.21
SS18-209ENST00000578595 TTRP02766 147 aa16.35■□□□□ 0.21
SS18-209ENST00000578595 PEX2P28328 305 aa16.35■□□□□ 0.21
SS18-209ENST00000578595 CSNK2BP67870 215 aa16.35■□□□□ 0.21
SS18-209ENST00000578595 HOXA4Q00056 320 aaPredicted RBP16.35■□□□□ 0.21
SS18-209ENST00000578595 TP53I3Q53FA7 332 aa16.35■□□□□ 0.21
SS18-209ENST00000578595 NLRC3Q7RTR2 1065 aa16.35■□□□□ 0.21
SS18-209ENST00000578595 PRIMA1Q86XR5 153 aa16.35■□□□□ 0.21
SS18-209ENST00000578595 PLPP7Q8NBV4 271 aa16.35■□□□□ 0.21
SS18-209ENST00000578595 OR8B3Q8NGG8 313 aa16.35■□□□□ 0.21
SS18-209ENST00000578595 OR8B2Q96RD0 313 aa16.35■□□□□ 0.21
SS18-209ENST00000578595 TMEM246Q9BRR3 403 aa16.35■□□□□ 0.21
SS18-209ENST00000578595 PHF1O43189 567 aaPredicted RBP16.34■□□□□ 0.21
SS18-209ENST00000578595 FAHP16930 419 aa16.34■□□□□ 0.21
SS18-209ENST00000578595 GMFBP60983 142 aa16.34■□□□□ 0.21
SS18-209ENST00000578595 GNB2P62879 340 aa16.34■□□□□ 0.21
SS18-209ENST00000578595 ZNF91Q05481 1191 aa16.34■□□□□ 0.21
SS18-209ENST00000578595 RIPPLY1Q0D2K3 151 aa16.34■□□□□ 0.21
SS18-209ENST00000578595 ZNF404Q494X3 552 aa16.34■□□□□ 0.21
SS18-209ENST00000578595 CEP78Q5JTW2 689 aa16.34■□□□□ 0.21
SS18-209ENST00000578595 LIPNQ5VXI9 398 aa16.34■□□□□ 0.21
SS18-209ENST00000578595 PLCXD3Q63HM9 321 aa16.34■□□□□ 0.21
SS18-209ENST00000578595 MOB3CQ70IA8 216 aa16.34■□□□□ 0.21
SS18-209ENST00000578595 OR1M1Q8NGA1 313 aa16.34■□□□□ 0.21
SS18-209ENST00000578595 LRRC29Q8WV35 223 aa16.34■□□□□ 0.21
SS18-209ENST00000578595 ITPKCQ96DU7 683 aa16.34■□□□□ 0.21
SS18-209ENST00000578595 RNF170Q96K19 258 aa16.34■□□□□ 0.21
SS18-209ENST00000578595 ADI1Q9BV57 179 aa16.34■□□□□ 0.21
SS18-209ENST00000578595 METTL17Q9H7H0 456 aaPredicted RBP16.34■□□□□ 0.21
SS18-209ENST00000578595 PLEKHA1Q9HB21 404 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms