RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 KLHL12Q53G59 568 aa12.01□□□□□ -0.49
SMARCE1-213ENST00000578044 METTL11BQ5VVY1 283 aa12.01□□□□□ -0.49
SMARCE1-213ENST00000578044 WDR82Q6UXN9 313 aa12.01□□□□□ -0.49
SMARCE1-213ENST00000578044 SLC36A1Q7Z2H8 476 aa12.01□□□□□ -0.49
SMARCE1-213ENST00000578044 ERI1Q8IV48 349 aaKnown RBP12.01□□□□□ -0.49
SMARCE1-213ENST00000578044 KIR3DL3Q8N743 410 aa12.01□□□□□ -0.49
SMARCE1-213ENST00000578044 LY6G5BQ8NDX9 201 aa12.01□□□□□ -0.49
SMARCE1-213ENST00000578044 OR1M1Q8NGA1 313 aa12.01□□□□□ -0.49
SMARCE1-213ENST00000578044 OR6N2Q8NGY6 317 aa12.01□□□□□ -0.49
SMARCE1-213ENST00000578044 C8orf46Q8TAG6 207 aa12.01□□□□□ -0.49
SMARCE1-213ENST00000578044 GATAD2BQ8WXI9 593 aa12.01□□□□□ -0.49
SMARCE1-213ENST00000578044 ITPKCQ96DU7 683 aa12.01□□□□□ -0.49
SMARCE1-213ENST00000578044 TEX12Q9BXU0 123 aa12.01□□□□□ -0.49
SMARCE1-213ENST00000578044 SIRPDQ9H106 197 aa12.01□□□□□ -0.49
SMARCE1-213ENST00000578044 ZNF556Q9HAH1 456 aa12.01□□□□□ -0.49
SMARCE1-213ENST00000578044 IGHV3-64DA0A0J9YX35 117 aa12□□□□□ -0.49
SMARCE1-213ENST00000578044 A0A0U1RQV5 110 aa12□□□□□ -0.49
SMARCE1-213ENST00000578044 ANXA2P2A6NMY6 339 aa12□□□□□ -0.49
SMARCE1-213ENST00000578044 PRR23D1E9PI22 279 aaPredicted RBP12□□□□□ -0.49
SMARCE1-213ENST00000578044 H3BN98 237 aa12□□□□□ -0.49
SMARCE1-213ENST00000578044 E2F6O75461 281 aa12□□□□□ -0.49
SMARCE1-213ENST00000578044 TOX4O94842 621 aa12□□□□□ -0.49
SMARCE1-213ENST00000578044 ANXA2P07355 339 aaKnown RBP12□□□□□ -0.49
SMARCE1-213ENST00000578044 PRR23D2P0DMB1 279 aaPredicted RBP12□□□□□ -0.49
SMARCE1-213ENST00000578044 TGM4P49221 684 aa12□□□□□ -0.49
SMARCE1-213ENST00000578044 ZNF121P58317 390 aaPredicted RBP12□□□□□ -0.49
SMARCE1-213ENST00000578044 PSMA6P60900 246 aaKnown RBP12□□□□□ -0.49
SMARCE1-213ENST00000578044 CDONQ4KMG0 1287 aa12□□□□□ -0.49
SMARCE1-213ENST00000578044 DNAL1Q4LDG9 190 aa12□□□□□ -0.49
SMARCE1-213ENST00000578044 LDLRAD3Q86YD5 345 aa12□□□□□ -0.49
SMARCE1-213ENST00000578044 SSMEM1Q8WWF3 244 aa12□□□□□ -0.49
SMARCE1-213ENST00000578044 TECTBQ96PL2 329 aa12□□□□□ -0.49
SMARCE1-213ENST00000578044 TBX15Q96SF7 602 aa12□□□□□ -0.49
SMARCE1-213ENST00000578044 MICU1Q9BPX6 476 aa12□□□□□ -0.49
SMARCE1-213ENST00000578044 MMADHCQ9H3L0 296 aaPredicted RBP12□□□□□ -0.49
SMARCE1-213ENST00000578044 CNTD2Q9H8S5 307 aa12□□□□□ -0.49
SMARCE1-213ENST00000578044 UNKLQ9H9P5 680 aaKnown RBP12□□□□□ -0.49
SMARCE1-213ENST00000578044 SLC25A19Q9HC21 320 aa12□□□□□ -0.49
SMARCE1-213ENST00000578044 ACOXLQ9NUZ1 547 aa12□□□□□ -0.49
SMARCE1-213ENST00000578044 RPUSD1Q9UJJ7 312 aaKnown RBP12□□□□□ -0.49
SMARCE1-213ENST00000578044 PCDHGB1Q9Y5G3 927 aa12□□□□□ -0.49
SMARCE1-213ENST00000578044 CENPVL3A0A0U1RRI6 287 aa11.99□□□□□ -0.49
SMARCE1-213ENST00000578044 A0A1B0GVI7 797 aa11.99□□□□□ -0.49
SMARCE1-213ENST00000578044 A6NLC8 198 aa11.99□□□□□ -0.49
SMARCE1-213ENST00000578044 C3orf80F5H4A9 247 aa11.99□□□□□ -0.49
SMARCE1-213ENST00000578044 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.99□□□□□ -0.49
SMARCE1-213ENST00000578044 DVL1O14640 695 aa11.99□□□□□ -0.49
SMARCE1-213ENST00000578044 ZNF254O75437 659 aa11.99□□□□□ -0.49
SMARCE1-213ENST00000578044 GRPP07492 148 aa11.99□□□□□ -0.49
SMARCE1-213ENST00000578044 H2BFMP0C1H6 154 aa11.99□□□□□ -0.49
SMARCE1-213ENST00000578044 SLC2A1P11166 492 aa11.99□□□□□ -0.49
SMARCE1-213ENST00000578044 ALOX5APP20292 161 aa11.99□□□□□ -0.49
SMARCE1-213ENST00000578044 GNALP38405 381 aa11.99□□□□□ -0.49
SMARCE1-213ENST00000578044 PPP1R8Q12972 351 aaKnown RBP11.99□□□□□ -0.49
SMARCE1-213ENST00000578044 DEFB112Q30KQ8 113 aa11.99□□□□□ -0.49
SMARCE1-213ENST00000578044 ZBTB37Q5TC79 503 aa11.99□□□□□ -0.49
SMARCE1-213ENST00000578044 SFRP4Q6FHJ7 346 aaPredicted RBP11.99□□□□□ -0.49
SMARCE1-213ENST00000578044 WDR86Q86TI4 376 aa11.99□□□□□ -0.49
SMARCE1-213ENST00000578044 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.99□□□□□ -0.49
SMARCE1-213ENST00000578044 CANT1Q8WVQ1 401 aa11.99□□□□□ -0.49
SMARCE1-213ENST00000578044 TMIGD2Q96BF3 282 aa11.99□□□□□ -0.49
SMARCE1-213ENST00000578044 RTL8AQ9BWD3 113 aa11.99□□□□□ -0.49
SMARCE1-213ENST00000578044 YIPF3Q9GZM5 350 aa11.99□□□□□ -0.49
SMARCE1-213ENST00000578044 SMURF1Q9HCE7 757 aa11.99□□□□□ -0.49
SMARCE1-213ENST00000578044 DNAJB9Q9UBS3 223 aa11.99□□□□□ -0.49
SMARCE1-213ENST00000578044 TMEM14AQ9Y6G1 99 aa11.99□□□□□ -0.49
SMARCE1-213ENST00000578044 IGHV1-69DA0A0B4J2H0 117 aa11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 hCG_1807616A0A1W2PRN6 198 aa11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 TCRBV3S1A0A5B6 114 aa11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 FAM183AA6NL82 134 aa11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 TBX1O43435 398 aa11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 IGHV1-69P01742 117 aa11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 SLC2A5P22732 501 aa11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 ROM1Q03395 351 aa11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 GINS1Q14691 196 aa11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 LCN1P1Q5VSP4 162 aa11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 STUMQ69YW2 141 aa11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 KCTD18Q6PI47 426 aaPredicted RBP11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 ZNF826PQ6ZT77 177 aa11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 FAM57BQ71RH2 274 aa11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 BTN2A1Q7KYR7 527 aa11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 OR4F5Q8NH21 305 aa11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 TBC1D15Q8TC07 691 aa11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 LRRC29Q8WV35 223 aa11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 OR5P3Q8WZ94 311 aa11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 DYRK2Q92630 601 aa11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 ZDHHC16Q969W1 377 aa11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 PGAM5Q96HS1 289 aa11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 PDP1Q9P0J1 537 aaPredicted RBP11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 ZNF319Q9P2F9 582 aa11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 CAB39Q9Y376 341 aaPredicted RBP11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 RHBDD3Q9Y3P4 386 aa11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 VWFP04275 2813 aa11.98□□□□□ -0.49
SMARCE1-213ENST00000578044 GNGT2O14610 69 aa11.97□□□□□ -0.49
SMARCE1-213ENST00000578044 HOXA3O43365 443 aaPredicted RBP11.97□□□□□ -0.49
SMARCE1-213ENST00000578044 FCN3O75636 299 aa11.97□□□□□ -0.49
SMARCE1-213ENST00000578044 GYPAP02724 150 aa11.97□□□□□ -0.49
SMARCE1-213ENST00000578044 CAV3P56539 151 aa11.97□□□□□ -0.49
SMARCE1-213ENST00000578044 GUCA2AQ02747 115 aa11.97□□□□□ -0.49
SMARCE1-213ENST00000578044 PLBD1Q6P4A8 553 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms