RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 ZNF319Q9P2F9 582 aa13.44□□□□□ -0.26
VAPA-204ENST00000577901 ZNF391Q9UJN7 358 aa13.44□□□□□ -0.26
VAPA-204ENST00000577901 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.44□□□□□ -0.265e-9■□□□□ 10.1
VAPA-204ENST00000577901 COPS3Q9UNS2 423 aa13.44□□□□□ -0.26
VAPA-204ENST00000577901 PPIAL4AQ9Y536 164 aa13.44□□□□□ -0.26
VAPA-204ENST00000577901 GMPPBQ9Y5P6 360 aa13.44□□□□□ -0.26
VAPA-204ENST00000577901 SNTNA6NMZ2 147 aa13.43□□□□□ -0.26
VAPA-204ENST00000577901 OR2T7P0C7T2 308 aa13.43□□□□□ -0.26
VAPA-204ENST00000577901 IRF2P14316 349 aa13.43□□□□□ -0.26
VAPA-204ENST00000577901 CD200P41217 278 aa13.43□□□□□ -0.26
VAPA-204ENST00000577901 GSK3AP49840 483 aa13.43□□□□□ -0.26
VAPA-204ENST00000577901 MMP16P51512 607 aa13.43□□□□□ -0.26
VAPA-204ENST00000577901 GABPB1Q06547 395 aaPredicted RBP13.43□□□□□ -0.26
VAPA-204ENST00000577901 FOXL1Q12952 345 aa13.43□□□□□ -0.26
VAPA-204ENST00000577901 MAB21L1Q13394 359 aa13.43□□□□□ -0.26
VAPA-204ENST00000577901 ZNF829Q3KNS6 432 aaPredicted RBP13.43□□□□□ -0.26
VAPA-204ENST00000577901 SLC25A30Q5SVS4 291 aa13.43□□□□□ -0.26
VAPA-204ENST00000577901 SHISA2Q6UWI4 295 aa13.43□□□□□ -0.26
VAPA-204ENST00000577901 RBMS3Q6XE24 437 aaKnown RBP13.43□□□□□ -0.26
VAPA-204ENST00000577901 CSNK2A3Q8NEV1 391 aa13.43□□□□□ -0.26
VAPA-204ENST00000577901 OR2T27Q8NH04 317 aa13.43□□□□□ -0.26
VAPA-204ENST00000577901 UBE2FQ969M7 185 aa13.43□□□□□ -0.26
VAPA-204ENST00000577901 PPIAL4EA0A075B759 164 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 PPIAL4CA0A0B4J2A2 164 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 IGHV3-64DA0A0J9YX35 117 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 hCG_38984A0A1B0GV85 526 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 PPIAL4DF5H284 164 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 TMEM178BH3BS89 294 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 TMPRSS2O15393 492 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 MPZL2O60487 215 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 FOXH1O75593 365 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 PPIAL4FP0DN26 164 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 HKR1P10072 659 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 ZFP36P26651 326 aaKnown RBP13.42□□□□□ -0.26
VAPA-204ENST00000577901 GNALP38405 381 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 GATA4P43694 442 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 SNRPGP62308 76 aaKnown RBP13.42□□□□□ -0.26
VAPA-204ENST00000577901 BTG1P62324 171 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 OCLNQ16625 522 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 ZNF181Q2M3W8 571 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 MOGAT3Q86VF5 341 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 C1orf87Q8N0U7 546 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 SPICQ8N5J4 248 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 SIGLECL1Q8N7X8 197 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 PLPP7Q8NBV4 271 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 OR8B12Q8NGG6 310 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 OR11L1Q8NGX0 322 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 ZNF420Q8TAQ5 688 aaPredicted RBP13.42□□□□□ -0.26
VAPA-204ENST00000577901 ITFG2Q969R8 447 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 MBOAT4Q96T53 435 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 TTTY10Q9BZA0 68 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 ZNF696Q9H7X3 374 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 C14orf119Q9NWQ9 140 aa13.42□□□□□ -0.26
VAPA-204ENST00000577901 LOC100130705A0A1B0GUX0 176 aa13.41□□□□□ -0.26
VAPA-204ENST00000577901 E9PQ18 207 aa13.41□□□□□ -0.26
VAPA-204ENST00000577901 ENTPD6O75354 484 aa13.41□□□□□ -0.26
VAPA-204ENST00000577901 IGHV2-70P01814 119 aa13.41□□□□□ -0.26
VAPA-204ENST00000577901 KRT8P05787 483 aa13.41□□□□□ -0.26
VAPA-204ENST00000577901 MTNR1AP48039 350 aa13.41□□□□□ -0.26
VAPA-204ENST00000577901 LRRC28Q86X40 367 aaPredicted RBP13.41□□□□□ -0.26
VAPA-204ENST00000577901 KLHL36Q8N4N3 616 aa13.41□□□□□ -0.26
VAPA-204ENST00000577901 ZNF555Q8NEP9 628 aa13.41□□□□□ -0.26
VAPA-204ENST00000577901 OR10H4Q8NGA5 316 aa13.41□□□□□ -0.26
VAPA-204ENST00000577901 OR8S1Q8NH09 359 aa13.41□□□□□ -0.26
VAPA-204ENST00000577901 Q96MT0 163 aa13.41□□□□□ -0.26
VAPA-204ENST00000577901 RDH12Q96NR8 316 aa13.41□□□□□ -0.26
VAPA-204ENST00000577901 SIGLEC11Q96RL6 698 aa13.41□□□□□ -0.26
VAPA-204ENST00000577901 TBX5Q99593 518 aa13.41□□□□□ -0.26
VAPA-204ENST00000577901 APOL4Q9BPW4 351 aa13.41□□□□□ -0.26
VAPA-204ENST00000577901 PBOV1Q9GZY1 135 aa13.41□□□□□ -0.26
VAPA-204ENST00000577901 FN3KRPQ9HA64 309 aa13.41□□□□□ -0.26
VAPA-204ENST00000577901 C8orf4Q9NR00 106 aa13.41□□□□□ -0.26
VAPA-204ENST00000577901 FAM206AQ9NX38 181 aa13.41□□□□□ -0.26
VAPA-204ENST00000577901 DCAF16Q9NXF7 216 aa13.41□□□□□ -0.26
VAPA-204ENST00000577901 TANC2Q9HCD6 1990 aa13.4□□□□□ -0.26
VAPA-204ENST00000577901 A0A0U1RQV5 110 aa13.4□□□□□ -0.26
VAPA-204ENST00000577901 PRR32B1ATL7 298 aa13.4□□□□□ -0.26
VAPA-204ENST00000577901 ANKRD65E5RJM6 399 aa13.4□□□□□ -0.26
VAPA-204ENST00000577901 CYB5R3P00387 301 aaPredicted RBP13.4□□□□□ -0.26
VAPA-204ENST00000577901 MDH2P40926 338 aaKnown RBP13.4□□□□□ -0.26
VAPA-204ENST00000577901 HNRNPA0Q13151 305 aaKnown RBP13.4□□□□□ -0.26
VAPA-204ENST00000577901 RCN1Q15293 331 aa13.4□□□□□ -0.26
VAPA-204ENST00000577901 OR8B8Q15620 311 aa13.4□□□□□ -0.26
VAPA-204ENST00000577901 TUSC1Q2TAM9 212 aa13.4□□□□□ -0.26
VAPA-204ENST00000577901 TMEM155Q4W5P6 130 aa13.4□□□□□ -0.26
VAPA-204ENST00000577901 ARMCX4Q5H9R4 360 aa13.4□□□□□ -0.26
VAPA-204ENST00000577901 DOK3Q7L591 496 aa13.4□□□□□ -0.26
VAPA-204ENST00000577901 COMMD2Q86X83 199 aa13.4□□□□□ -0.26
VAPA-204ENST00000577901 MUC20Q8N307 709 aaPredicted RBP13.4□□□□□ -0.26
VAPA-204ENST00000577901 DEFB108BQ8NET1 73 aa13.4□□□□□ -0.26
VAPA-204ENST00000577901 Q8TCH9 128 aa13.4□□□□□ -0.26
VAPA-204ENST00000577901 PAPOLGQ9BWT3 736 aaKnown RBP13.4□□□□□ -0.26
VAPA-204ENST00000577901 MOB1AQ9H8S9 216 aa13.4□□□□□ -0.26
VAPA-204ENST00000577901 MMP26Q9NRE1 261 aa13.4□□□□□ -0.26
VAPA-204ENST00000577901 FAM118AQ9NWS6 357 aa13.4□□□□□ -0.26
VAPA-204ENST00000577901 SMPD3Q9NY59 655 aaPredicted RBP13.4□□□□□ -0.26
VAPA-204ENST00000577901 NUP50Q9UKX7 468 aa13.4□□□□□ -0.26
VAPA-204ENST00000577901 MPC1Q9Y5U8 109 aa13.4□□□□□ -0.26
VAPA-204ENST00000577901 R4GMQ9 66 aa13.4□□□□□ -0.26
VAPA-204ENST00000577901 A0A1W2PQL4 384 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms