RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 MYOZ1Q9NP98 299 aaPredicted RBP13.78□□□□□ -0.2
PFN1-203ENST00000574872 ERVK-18Q9QC07 812 aa13.78□□□□□ -0.2
PFN1-203ENST00000574872 IL19Q9UHD0 177 aa13.78□□□□□ -0.2
PFN1-203ENST00000574872 PIGLQ9Y2B2 252 aa13.78□□□□□ -0.2
PFN1-203ENST00000574872 TPRKBQ9Y3C4 175 aa13.78□□□□□ -0.2
PFN1-203ENST00000574872 A0A1B0GWJ7 208 aa13.77□□□□□ -0.21
PFN1-203ENST00000574872 LOC390937A0A1W2PQ73 354 aa13.77□□□□□ -0.21
PFN1-203ENST00000574872 OR4C45A6NMZ5 311 aa13.77□□□□□ -0.21
PFN1-203ENST00000574872 MYL12BO14950 172 aa13.77□□□□□ -0.21
PFN1-203ENST00000574872 DENRO43583 198 aaKnown RBP13.77□□□□□ -0.21
PFN1-203ENST00000574872 LMX1BO60663 402 aa13.77□□□□□ -0.21
PFN1-203ENST00000574872 MTRF1O75570 445 aaKnown RBP13.77□□□□□ -0.21
PFN1-203ENST00000574872 CCDC159P0C7I6 412 aa13.77□□□□□ -0.21
PFN1-203ENST00000574872 UBCP0CG48 685 aaKnown RBP13.77□□□□□ -0.21
PFN1-203ENST00000574872 FLNAP21333 2647 aaKnown RBP13.77□□□□□ -0.21
PFN1-203ENST00000574872 CRHBPP24387 322 aa13.77□□□□□ -0.21
PFN1-203ENST00000574872 SRP9P49458 86 aaKnown RBP13.77□□□□□ -0.21
PFN1-203ENST00000574872 DSCR9P59020 149 aa13.77□□□□□ -0.21
PFN1-203ENST00000574872 SLC35A2P78381 396 aa13.77□□□□□ -0.21
PFN1-203ENST00000574872 RIPPLY1Q0D2K3 151 aa13.77□□□□□ -0.21
PFN1-203ENST00000574872 PRDX4Q13162 271 aa13.77□□□□□ -0.21
PFN1-203ENST00000574872 MAB21L1Q13394 359 aa13.77□□□□□ -0.21
PFN1-203ENST00000574872 DMRTC1Q5HYR2 192 aa13.77□□□□□ -0.21
PFN1-203ENST00000574872 PRAMEF6Q5VXH4 476 aa13.77□□□□□ -0.21
PFN1-203ENST00000574872 SPNS3Q6ZMD2 512 aa13.77□□□□□ -0.21
PFN1-203ENST00000574872 DOK3Q7L591 496 aa13.77□□□□□ -0.21
PFN1-203ENST00000574872 FTMTQ8N4E7 242 aa13.77□□□□□ -0.21
PFN1-203ENST00000574872 OR14K1Q8NGZ2 314 aa13.77□□□□□ -0.21
PFN1-203ENST00000574872 OR8S1Q8NH09 359 aa13.77□□□□□ -0.21
PFN1-203ENST00000574872 OR52N1Q8NH53 320 aa13.77□□□□□ -0.21
PFN1-203ENST00000574872 CCL17Q92583 94 aa13.77□□□□□ -0.21
PFN1-203ENST00000574872 PIMREGQ9BSJ6 248 aa13.77□□□□□ -0.21
PFN1-203ENST00000574872 ZNF275Q9NSD4 429 aaPredicted RBP13.77□□□□□ -0.21
PFN1-203ENST00000574872 DCAF16Q9NXF7 216 aa13.77□□□□□ -0.21
PFN1-203ENST00000574872 NOP16Q9Y3C1 178 aaKnown RBP13.77□□□□□ -0.21
PFN1-203ENST00000574872 ZNF816-ZNF321PA0A0X1KG74 233 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 RNF223E7ERA6 249 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 H7C1Q1 480 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 SMAD7O15105 426 aaKnown RBP13.76□□□□□ -0.21
PFN1-203ENST00000574872 GMDSO60547 372 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 RP2O75695 350 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 LALBAP00709 142 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 ATP6V1B1P15313 513 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 TNFRSF1AP19438 455 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 ACHEP22303 614 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 CCL1P22362 96 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 CRYBB2P43320 205 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 MRPS11P82912 194 aaKnown RBP13.76□□□□□ -0.21
PFN1-203ENST00000574872 MRPL28Q13084 256 aaKnown RBP13.76□□□□□ -0.21
PFN1-203ENST00000574872 HFEQ30201 348 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 MOGAT3Q86VF5 341 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 CIARTQ8N365 385 aaPredicted RBP13.76□□□□□ -0.21
PFN1-203ENST00000574872 ZNF676Q8N7Q3 588 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 ZFP41Q8N8Y5 198 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 PLPP7Q8NBV4 271 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 MAPK1IP1LQ8NDC0 245 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 OR10AC1Q8NH08 325 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 ZNF420Q8TAQ5 688 aaPredicted RBP13.76□□□□□ -0.21
PFN1-203ENST00000574872 PDCD1LG2Q9BQ51 273 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 BPESC1Q9GZL8 116 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 CCDC90BQ9GZT6 254 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 CHODLQ9H9P2 273 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 PLEKHA1Q9HB21 404 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 UFSP2Q9NUQ7 469 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 ENPP5Q9UJA9 477 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 ERGIC3Q9Y282 383 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 V9GYS6 101 aa13.76□□□□□ -0.21
PFN1-203ENST00000574872 ZNF469Q96JG9 3925 aaPredicted RBP13.76□□□□□ -0.21
PFN1-203ENST00000574872 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.75□□□□□ -0.21
PFN1-203ENST00000574872 TRBV2A0A0J9YWF9 115 aa13.75□□□□□ -0.21
PFN1-203ENST00000574872 ANXA2P2A6NMY6 339 aa13.75□□□□□ -0.21
PFN1-203ENST00000574872 PPIHO43447 177 aaKnown RBP13.75□□□□□ -0.21
PFN1-203ENST00000574872 RGS10O43665 173 aa13.75□□□□□ -0.21
PFN1-203ENST00000574872 ZFPL1O95159 310 aa13.75□□□□□ -0.21
PFN1-203ENST00000574872 CST4P01036 141 aa13.75□□□□□ -0.21
PFN1-203ENST00000574872 MT-ND2P03891 347 aa13.75□□□□□ -0.21
PFN1-203ENST00000574872 GRPP07492 148 aa13.75□□□□□ -0.21
PFN1-203ENST00000574872 EEF1B2P24534 225 aaKnown RBP13.75□□□□□ -0.21
PFN1-203ENST00000574872 CD200P41217 278 aa13.75□□□□□ -0.21
PFN1-203ENST00000574872 TGM4P49221 684 aa13.75□□□□□ -0.21
PFN1-203ENST00000574872 CCR9P51686 369 aa13.75□□□□□ -0.21
PFN1-203ENST00000574872 DOC2BQ14184 412 aa13.75□□□□□ -0.21
PFN1-203ENST00000574872 CEP78Q5JTW2 689 aa13.75□□□□□ -0.21
PFN1-203ENST00000574872 RBM48Q5RL73 367 aaKnown RBP13.75□□□□□ -0.21
PFN1-203ENST00000574872 TMEM244Q5VVB8 128 aa13.75□□□□□ -0.21
PFN1-203ENST00000574872 EGFL6Q8IUX8 553 aa13.75□□□□□ -0.21
PFN1-203ENST00000574872 ZDHHC23Q8IYP9 409 aa13.75□□□□□ -0.21
PFN1-203ENST00000574872 OR51A4Q8NGJ6 313 aa13.75□□□□□ -0.21
PFN1-203ENST00000574872 REG4Q9BYZ8 158 aa13.75□□□□□ -0.21
PFN1-203ENST00000574872 DUSP21Q9H596 190 aa13.75□□□□□ -0.21
PFN1-203ENST00000574872 GCM1Q9NP62 436 aa13.75□□□□□ -0.21
PFN1-203ENST00000574872 TRIM36Q9NQ86 728 aa13.75□□□□□ -0.21
PFN1-203ENST00000574872 DLL4Q9NR61 685 aa13.75□□□□□ -0.21
PFN1-203ENST00000574872 BABAM2Q9NXR7 383 aa13.75□□□□□ -0.21
PFN1-203ENST00000574872 PPP1R3CQ9UQK1 317 aa13.75□□□□□ -0.21
PFN1-203ENST00000574872 SIRT4Q9Y6E7 314 aaPredicted RBP13.75□□□□□ -0.21
PFN1-203ENST00000574872 ACANP16112 2415 aa13.75□□□□□ -0.21
PFN1-203ENST00000574872 LOC100289279A0A1B0GTE1 492 aa13.74□□□□□ -0.21
PFN1-203ENST00000574872 PNMA8CA0A1B0GUJ8 204 aa13.74□□□□□ -0.21
PFN1-203ENST00000574872 NDUFS8O00217 210 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms