RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 NUDT16L1Q9BRJ7 211 aaKnown RBP24.7■■□□□ 1.54
CTDNEP1-210ENST00000574322 COPZ2Q9P299 210 aa24.7■■□□□ 1.54
CTDNEP1-210ENST00000574322 MTFP1Q9UDX5 166 aa24.7■■□□□ 1.54
CTDNEP1-210ENST00000574322 METTL21EPA6NDL7 271 aa24.69■■□□□ 1.54
CTDNEP1-210ENST00000574322 NAP1L6A6NFF2 107 aa24.69■■□□□ 1.54
CTDNEP1-210ENST00000574322 SULT1C2O00338 296 aa24.69■■□□□ 1.54
CTDNEP1-210ENST00000574322 SCGNO76038 276 aa24.69■■□□□ 1.54
CTDNEP1-210ENST00000574322 ACKR3P25106 362 aa24.69■■□□□ 1.54
CTDNEP1-210ENST00000574322 PMPCAQ10713 525 aa24.69■■□□□ 1.54
CTDNEP1-210ENST00000574322 TNK1Q13470 666 aa24.69■■□□□ 1.54
CTDNEP1-210ENST00000574322 AWAT2Q6E213 333 aa24.69■■□□□ 1.54
CTDNEP1-210ENST00000574322 UPRTQ96BW1 309 aa24.69■■□□□ 1.54
CTDNEP1-210ENST00000574322 MRPS28Q9Y2Q9 187 aaKnown RBP24.69■■□□□ 1.54
CTDNEP1-210ENST00000574322 ATMQ13315 3056 aa24.69■■□□□ 1.54
CTDNEP1-210ENST00000574322 hCG_38984A0A1B0GV85 526 aa24.69■■□□□ 1.54
CTDNEP1-210ENST00000574322 PTHLHP12272 177 aa24.69■■□□□ 1.54
CTDNEP1-210ENST00000574322 GSK3AP49840 483 aa24.69■■□□□ 1.54
CTDNEP1-210ENST00000574322 BTG1P62324 171 aa24.69■■□□□ 1.54
CTDNEP1-210ENST00000574322 RAB1AP62820 205 aa24.69■■□□□ 1.54
CTDNEP1-210ENST00000574322 OR8B8Q15620 311 aa24.69■■□□□ 1.54
CTDNEP1-210ENST00000574322 TMEM42Q69YG0 159 aa24.69■■□□□ 1.54
CTDNEP1-210ENST00000574322 OR10K2Q6IF99 312 aa24.69■■□□□ 1.54
CTDNEP1-210ENST00000574322 RNF144BQ7Z419 303 aa24.69■■□□□ 1.54
CTDNEP1-210ENST00000574322 GLCCI1Q86VQ1 547 aa24.69■■□□□ 1.54
CTDNEP1-210ENST00000574322 DPAGT1Q9H3H5 408 aa24.69■■□□□ 1.54
CTDNEP1-210ENST00000574322 NOX3Q9HBY0 568 aa24.69■■□□□ 1.54
CTDNEP1-210ENST00000574322 GHRLQ9UBU3 117 aa24.69■■□□□ 1.54
CTDNEP1-210ENST00000574322 EDN3P14138 238 aa24.68■■□□□ 1.54
CTDNEP1-210ENST00000574322 KISS1Q15726 138 aa24.68■■□□□ 1.54
CTDNEP1-210ENST00000574322 ACSF3Q4G176 576 aaPredicted RBP24.68■■□□□ 1.54
CTDNEP1-210ENST00000574322 OR2A2Q6IF42 318 aa24.68■■□□□ 1.54
CTDNEP1-210ENST00000574322 SCPEP1Q9HB40 452 aa24.68■■□□□ 1.54
CTDNEP1-210ENST00000574322 A0A0B4J293 547 aa24.67■■□□□ 1.54
CTDNEP1-210ENST00000574322 TRAPPC2P0DI81 140 aa24.67■■□□□ 1.54
CTDNEP1-210ENST00000574322 TRAPPC2BP0DI82 140 aa24.67■■□□□ 1.54
CTDNEP1-210ENST00000574322 NAT2P11245 290 aa24.67■■□□□ 1.54
CTDNEP1-210ENST00000574322 PRSS3P35030 304 aa24.67■■□□□ 1.54
CTDNEP1-210ENST00000574322 FAM3AP98173 230 aa24.67■■□□□ 1.54
CTDNEP1-210ENST00000574322 ZBTB37Q5TC79 503 aa24.67■■□□□ 1.54
CTDNEP1-210ENST00000574322 RSBN1Q5VWQ0 802 aaPredicted RBP24.67■■□□□ 1.54
CTDNEP1-210ENST00000574322 OLFML2AQ68BL7 652 aa24.67■■□□□ 1.54
CTDNEP1-210ENST00000574322 GLIPR1L1Q6UWM5 242 aa24.67■■□□□ 1.54
CTDNEP1-210ENST00000574322 NANOS1Q8WY41 292 aaKnown RBP24.67■■□□□ 1.54
CTDNEP1-210ENST00000574322 SPSB1Q96BD6 273 aa24.67■■□□□ 1.54
CTDNEP1-210ENST00000574322 SPACA5Q96QH8 159 aa24.67■■□□□ 1.54
CTDNEP1-210ENST00000574322 TAS2R8Q9NYW2 309 aa24.67■■□□□ 1.54
CTDNEP1-210ENST00000574322 LHX6Q9UPM6 363 aa24.67■■□□□ 1.54
CTDNEP1-210ENST00000574322 CACNA1BQ00975 2339 aa24.67■■□□□ 1.54
CTDNEP1-210ENST00000574322 RAB27BO00194 218 aa24.66■■□□□ 1.54
CTDNEP1-210ENST00000574322 RBBP9O75884 186 aa24.66■■□□□ 1.54
CTDNEP1-210ENST00000574322 CRYABP02511 175 aaKnown RBP24.66■■□□□ 1.54
CTDNEP1-210ENST00000574322 SFTPCP11686 197 aa24.66■■□□□ 1.54
CTDNEP1-210ENST00000574322 CD79AP11912 226 aa24.66■■□□□ 1.54
CTDNEP1-210ENST00000574322 STOMP27105 288 aa24.66■■□□□ 1.54
CTDNEP1-210ENST00000574322 NSUN5P2Q63ZY6 315 aa24.66■■□□□ 1.54
CTDNEP1-210ENST00000574322 OR5M9Q8NGP3 310 aa24.66■■□□□ 1.54
CTDNEP1-210ENST00000574322 KCNG3Q8TAE7 436 aa24.66■■□□□ 1.54
CTDNEP1-210ENST00000574322 GPX8Q8TED1 209 aa24.66■■□□□ 1.54
CTDNEP1-210ENST00000574322 FAM46BQ96A09 425 aa24.66■■□□□ 1.54
CTDNEP1-210ENST00000574322 BOD1Q96IK1 185 aa24.66■■□□□ 1.54
CTDNEP1-210ENST00000574322 POM121L2Q96KW2 1035 aa24.66■■□□□ 1.54
CTDNEP1-210ENST00000574322 HRASLSQ9HDD0 168 aa24.66■■□□□ 1.54
CTDNEP1-210ENST00000574322 OR3A4PP47883 348 aa24.66■■□□□ 1.54
CTDNEP1-210ENST00000574322 ZNF92Q03936 586 aa24.66■■□□□ 1.54
CTDNEP1-210ENST00000574322 PLP2Q04941 152 aa24.66■■□□□ 1.54
CTDNEP1-210ENST00000574322 SF3B4Q15427 424 aaKnown RBP eCLIP24.66■■□□□ 1.549e-6■■■■■ 27.7
CTDNEP1-210ENST00000574322 CCDC36Q8IYA8 594 aa24.66■■□□□ 1.54
CTDNEP1-210ENST00000574322 PNLDC1Q8NA58 520 aaKnown RBP24.66■■□□□ 1.54
CTDNEP1-210ENST00000574322 C9orf106Q8NAJ2 232 aa24.66■■□□□ 1.54
CTDNEP1-210ENST00000574322 NUBP2Q9Y5Y2 271 aa24.66■■□□□ 1.54
CTDNEP1-210ENST00000574322 PIEZO2Q9H5I5 2752 aa24.65■■□□□ 1.54
CTDNEP1-210ENST00000574322 BOLA2-SMG1P6H3BVE0 249 aa24.65■■□□□ 1.54
CTDNEP1-210ENST00000574322 HLA-DMAP28067 261 aa24.65■■□□□ 1.54
CTDNEP1-210ENST00000574322 KIR2DL2P43627 348 aaPredicted RBP24.65■■□□□ 1.54
CTDNEP1-210ENST00000574322 LY6DQ14210 128 aa24.65■■□□□ 1.54
CTDNEP1-210ENST00000574322 FAM189A2Q15884 450 aa24.65■■□□□ 1.54
CTDNEP1-210ENST00000574322 OR6K3Q8NGY3 331 aa24.65■■□□□ 1.54
CTDNEP1-210ENST00000574322 CACNG6Q9BXT2 260 aa24.65■■□□□ 1.54
CTDNEP1-210ENST00000574322 MYEF2Q9P2K5 600 aaKnown RBP24.65■■□□□ 1.54
CTDNEP1-210ENST00000574322 INMT-MINDY4F8WBC2 141 aa24.64■■□□□ 1.54
CTDNEP1-210ENST00000574322 PTGFRP43088 359 aa24.64■■□□□ 1.54
CTDNEP1-210ENST00000574322 TGFBR3Q03167 851 aa24.64■■□□□ 1.54
CTDNEP1-210ENST00000574322 CARTPTQ16568 116 aa24.64■■□□□ 1.54
CTDNEP1-210ENST00000574322 TBRG1Q3YBR2 411 aa24.64■■□□□ 1.54
CTDNEP1-210ENST00000574322 PLEKHN1Q494U1 663 aaPredicted RBP24.64■■□□□ 1.54
CTDNEP1-210ENST00000574322 CLVS2Q5SYC1 327 aa24.64■■□□□ 1.54
CTDNEP1-210ENST00000574322 PCSK4Q6UW60 755 aa24.64■■□□□ 1.54
CTDNEP1-210ENST00000574322 Q6ZT83 130 aa24.64■■□□□ 1.54
CTDNEP1-210ENST00000574322 AKAP14Q86UN6 197 aa24.64■■□□□ 1.54
CTDNEP1-210ENST00000574322 CDH24Q86UP0 819 aa24.64■■□□□ 1.54
CTDNEP1-210ENST00000574322 ZNF584Q8IVC4 421 aa24.64■■□□□ 1.54
CTDNEP1-210ENST00000574322 HPS1Q92902 700 aa24.64■■□□□ 1.54
CTDNEP1-210ENST00000574322 APOBEC3DQ96AK3 386 aaPredicted RBP24.64■■□□□ 1.54
CTDNEP1-210ENST00000574322 WBP1Q96G27 269 aa24.64■■□□□ 1.54
CTDNEP1-210ENST00000574322 ZNF75AQ96N20 296 aa24.64■■□□□ 1.54
CTDNEP1-210ENST00000574322 GPER1Q99527 375 aa24.64■■□□□ 1.54
CTDNEP1-210ENST00000574322 NEK6Q9HC98 313 aa24.64■■□□□ 1.54
CTDNEP1-210ENST00000574322 ZNHIT1O43257 154 aa24.64■■□□□ 1.53
CTDNEP1-210ENST00000574322 GMDSO60547 372 aa24.64■■□□□ 1.53
CTDNEP1-210ENST00000574322 TCRBP04435 133 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms