RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	KIF17	Q9P2E2	1029 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	NUP50	Q9UKX7	468 aa		5.78	□□□□□ -1.48
SF3B3-209	ENST00000567635	SVEP1	Q4LDE5	3571 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	TRAV38-1	A0A0B4J264	116 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	IGHV2-70D	A0A0C4DH43	119 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	ACOD1	A6NK06	481 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635		A6NLC8	198 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635		G3V2T6	193 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635		H3BNX3	289 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	TNFRSF13B	O14836	293 aa	Predicted RBP	5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	BAG2	O95816	211 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	LHB	P01229	141 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	PPIAL4G	P0DN37	164 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	ALOX5AP	P20292	161 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	SLC2A5	P22732	501 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	GNAL	P38405	381 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	PSMB10	P40306	273 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	DAP	P51397	102 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	HCCS	P53701	268 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	ESRRG	P62508	458 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	APOF	Q13790	326 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	PTGES3	Q15185	160 aa	Known RBP	5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	OR8B8	Q15620	311 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	ATP6AP1	Q15904	470 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	CD276	Q5ZPR3	534 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	SFRP4	Q6FHJ7	346 aa	Predicted RBP	5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	KCTD18	Q6PI47	426 aa	Predicted RBP	5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	BRICD5	Q6PL45	260 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	DEGS2	Q6QHC5	323 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	RBMS3	Q6XE24	437 aa	Known RBP	5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	ZNF841	Q6ZN19	808 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	ZNF826P	Q6ZT77	177 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	KRT77	Q7Z794	578 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	PARP8	Q8N3A8	854 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	C19orf18	Q8NEA5	215 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	CSNK2A3	Q8NEV1	391 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	BBS1	Q8NFJ9	593 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	FAM216A	Q8WUB2	273 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	PYDC1	Q8WXC3	89 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	C22orf15	Q8WYQ4	148 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	GCDH	Q92947	438 aa	Predicted RBP	5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	NIPAL2	Q9H841	368 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	H2AFY2	Q9P0M6	372 aa	Predicted RBP	5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	ZNF319	Q9P2F9	582 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	ERVK-18	Q9QC07	812 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	CLN8	Q9UBY8	286 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	ZNF69	Q9UC07	566 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	SCOC	Q9UIL1	159 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	LAMP5	Q9UJQ1	280 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	LRRC42	Q9Y546	428 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	AP4S1	Q9Y587	144 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	KIAA2026	Q5HYC2	2103 aa		5.77	□□□□□ -1.49
SF3B3-209	ENST00000567635	TENM1	Q9UKZ4	2725 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	NBEAL1	Q6ZS30	2694 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	hCG_38984	A0A1B0GV85	526 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	hCG_1807616	A0A1W2PRN6	198 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	DPPA5	A6NC42	116 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	PHYH	O14832	338 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	ADAM20	O43506	726 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	ATP6V1G1	O75348	118 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	LIPF	P07098	398 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	FAS	P25445	335 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	CFHR2	P36980	270 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	VHL	P40337	213 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	NAA10	P41227	235 aa	Predicted RBP	5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	NPY4R	P50391	375 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	IL5RA	Q01344	420 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	TUSC1	Q2TAM9	212 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	GFOD2	Q3B7J2	385 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	KLF17	Q5JT82	389 aa	Predicted RBP	5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	LCN1P1	Q5VSP4	162 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	WDR25	Q64LD2	544 aa	Predicted RBP	5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	C12orf54	Q6X4T0	127 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	MEPCE	Q7L2J0	689 aa	Known RBP	5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	AMIGO2	Q86SJ2	522 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	ZDHHC13	Q8IUH4	622 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	C11orf53	Q8IXP5	236 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	BCL6B	Q8N143	479 aa	Predicted RBP	5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	PQLC1	Q8N2U9	271 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	GALNT4	Q8N4A0	578 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	FTMT	Q8N4E7	242 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	GCSAM	Q8N6F7	178 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	OR1M1	Q8NGA1	313 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	NRG4	Q8WWG1	115 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	ASB17	Q8WXJ9	295 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	DACT3	Q96B18	629 aa	Predicted RBP	5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	MICU1	Q9BPX6	476 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	NUDT16L1	Q9BRJ7	211 aa	Known RBP	5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	PAPOLG	Q9BWT3	736 aa	Known RBP	5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	PRRG3	Q9BZD7	231 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	MS4A7	Q9GZW8	240 aa	Predicted RBP	5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	KRT84	Q9NSB2	600 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	ZNF391	Q9UJN7	358 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	PAIP2B	Q9ULR5	123 aa	Known RBP	5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	KLHDC2	Q9Y2U9	406 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	RHBDD3	Q9Y3P4	386 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	LRP12	Q9Y561	859 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	MPC1	Q9Y5U8	109 aa		5.76	□□□□□ -1.49
SF3B3-209	ENST00000567635	TMEM14A	Q9Y6G1	99 aa		5.76	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms