RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 TIMD4Q96H15 378 aa17.8■□□□□ 0.44
SHCBP1-205ENST00000566016 PAPOLGQ9BWT3 736 aaKnown RBP17.8■□□□□ 0.44
SHCBP1-205ENST00000566016 PLCXD1Q9NUJ7 323 aa17.8■□□□□ 0.44
SHCBP1-205ENST00000566016 TMEM106BQ9NUM4 274 aa17.8■□□□□ 0.44
SHCBP1-205ENST00000566016 GTF2A1LQ9UNN4 478 aa17.8■□□□□ 0.44
SHCBP1-205ENST00000566016 RRP15Q9Y3B9 282 aaKnown RBP17.8■□□□□ 0.44
SHCBP1-205ENST00000566016 MPC1Q9Y5U8 109 aa17.8■□□□□ 0.44
SHCBP1-205ENST00000566016 MALRD1Q5VYJ5 2156 aa17.79■□□□□ 0.44
SHCBP1-205ENST00000566016 GNALP38405 381 aa17.79■□□□□ 0.44
SHCBP1-205ENST00000566016 CHN2P52757 468 aa17.79■□□□□ 0.44
SHCBP1-205ENST00000566016 OR12D2P58182 307 aa17.79■□□□□ 0.44
SHCBP1-205ENST00000566016 MRPL28Q13084 256 aaKnown RBP17.79■□□□□ 0.44
SHCBP1-205ENST00000566016 LAIR2Q6ISS4 152 aa17.79■□□□□ 0.44
SHCBP1-205ENST00000566016 LHFPL3Q86UP9 236 aa17.79■□□□□ 0.44
SHCBP1-205ENST00000566016 MAPK1IP1LQ8NDC0 245 aa17.79■□□□□ 0.44
SHCBP1-205ENST00000566016 Q8TCH9 128 aa17.79■□□□□ 0.44
SHCBP1-205ENST00000566016 PELI1Q96FA3 418 aa17.79■□□□□ 0.44
SHCBP1-205ENST00000566016 C4orf36Q96KX1 117 aa17.79■□□□□ 0.44
SHCBP1-205ENST00000566016 C14orf119Q9NWQ9 140 aa17.79■□□□□ 0.44
SHCBP1-205ENST00000566016 CNOT2Q9NZN8 540 aaKnown RBP17.79■□□□□ 0.44
SHCBP1-205ENST00000566016 DIMT1Q9UNQ2 313 aaKnown RBP17.79■□□□□ 0.44
SHCBP1-205ENST00000566016 RHBDD3Q9Y3P4 386 aa17.79■□□□□ 0.44
SHCBP1-205ENST00000566016 SETD2Q9BYW2 2564 aaPredicted RBP17.79■□□□□ 0.44
SHCBP1-205ENST00000566016 ZNF816-ZNF321PA0A0X1KG74 233 aa17.78■□□□□ 0.44
SHCBP1-205ENST00000566016 A0A1B0GTI1 187 aa17.78■□□□□ 0.44
SHCBP1-205ENST00000566016 TMEM249Q2WGJ8 235 aa17.78■□□□□ 0.44
SHCBP1-205ENST00000566016 WDR38Q5JTN6 314 aa17.78■□□□□ 0.44
SHCBP1-205ENST00000566016 IZUMO2Q6UXV1 221 aa17.78■□□□□ 0.44
SHCBP1-205ENST00000566016 PEG10Q86TG7 708 aaKnown RBP17.78■□□□□ 0.44
SHCBP1-205ENST00000566016 CCDC54Q8NEL0 328 aa17.78■□□□□ 0.44
SHCBP1-205ENST00000566016 SEMA6DQ8NFY4 1073 aa17.78■□□□□ 0.44
SHCBP1-205ENST00000566016 OR2G2Q8NGZ5 317 aa17.78■□□□□ 0.44
SHCBP1-205ENST00000566016 HPS1Q92902 700 aa17.78■□□□□ 0.44
SHCBP1-205ENST00000566016 RAB1CQ92928 201 aa17.78■□□□□ 0.44
SHCBP1-205ENST00000566016 PPP1R14AQ96A00 147 aa17.78■□□□□ 0.44
SHCBP1-205ENST00000566016 SOX7Q9BT81 388 aa17.78■□□□□ 0.44
SHCBP1-205ENST00000566016 ANKRD60Q9BZ19 345 aa17.78■□□□□ 0.44
SHCBP1-205ENST00000566016 SLC22A13Q9Y226 551 aa17.78■□□□□ 0.44
SHCBP1-205ENST00000566016 EFCAB10A6NFE3 127 aa17.77■□□□□ 0.44
SHCBP1-205ENST00000566016 ANXA2P2A6NMY6 339 aa17.77■□□□□ 0.44
SHCBP1-205ENST00000566016 UBCP0CG48 685 aaKnown RBP17.77■□□□□ 0.44
SHCBP1-205ENST00000566016 LIMS3P0CW19 117 aa17.77■□□□□ 0.44
SHCBP1-205ENST00000566016 LIMS4P0CW20 117 aa17.77■□□□□ 0.44
SHCBP1-205ENST00000566016 CCR9P51686 369 aa17.77■□□□□ 0.44
SHCBP1-205ENST00000566016 KRTAP1-1Q07627 177 aa17.77■□□□□ 0.44
SHCBP1-205ENST00000566016 DOK3Q7L591 496 aa17.77■□□□□ 0.44
SHCBP1-205ENST00000566016 PRSS35Q8N3Z0 413 aa17.77■□□□□ 0.44
SHCBP1-205ENST00000566016 OR8S1Q8NH09 359 aa17.77■□□□□ 0.44
SHCBP1-205ENST00000566016 ITPKCQ96DU7 683 aa17.77■□□□□ 0.44
SHCBP1-205ENST00000566016 FAM71F1Q96KD3 344 aaPredicted RBP17.77■□□□□ 0.44
SHCBP1-205ENST00000566016 WIPI2Q9Y4P8 454 aa17.77■□□□□ 0.44
SHCBP1-205ENST00000566016 V9GYS6 101 aa17.77■□□□□ 0.44
SHCBP1-205ENST00000566016 NIPBLQ6KC79 2804 aaeCLIP17.77■□□□□ 0.43
SHCBP1-205ENST00000566016 LRRC30A6NM36 301 aa17.76■□□□□ 0.43
SHCBP1-205ENST00000566016 J3QLW9 94 aa17.76■□□□□ 0.43
SHCBP1-205ENST00000566016 FSTL3O95633 263 aa17.76■□□□□ 0.43
SHCBP1-205ENST00000566016 ZNF19P17023 458 aa17.76■□□□□ 0.43
SHCBP1-205ENST00000566016 CSNK2BP67870 215 aa17.76■□□□□ 0.43
SHCBP1-205ENST00000566016 RIPPLY1Q0D2K3 151 aa17.76■□□□□ 0.43
SHCBP1-205ENST00000566016 DVL3Q92997 716 aaPredicted RBP17.76■□□□□ 0.43
SHCBP1-205ENST00000566016 TREM2Q9NZC2 230 aa17.76■□□□□ 0.43
SHCBP1-205ENST00000566016 EXOSC1Q9Y3B2 195 aaKnown RBP17.76■□□□□ 0.43
SHCBP1-205ENST00000566016 LOC100289279A0A1B0GTE1 492 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 TMEM178BH3BS89 294 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 ISG15P05161 165 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 HEXAP06865 529 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 HTR1AP08908 422 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 MYL12AP19105 171 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 MYF6P23409 242 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 VHLP40337 213 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 KIR3DL2P43630 455 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 PRDX4Q13162 271 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 MED21Q13503 144 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 CLEC9AQ6UXN8 241 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 MOGAT3Q86VF5 341 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 C1orf87Q8N0U7 546 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 SMR3AQ99954 134 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 FN3KRPQ9HA64 309 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 FRRS1LQ9P0K9 344 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 PSORS1C1Q9UIG5 152 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 ENPP5Q9UJA9 477 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 CAB39Q9Y376 341 aaPredicted RBP17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 NPTNQ9Y639 398 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 A0A1B0GVI7 797 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 P2RY10O00398 339 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 RRP9O43818 475 aaKnown RBP17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 LY6G6DO95868 133 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 ZNF12P17014 697 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 PSMB10P40306 273 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 NANOS3P60323 173 aaKnown RBP17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 TMEM42Q69YG0 159 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 ZDHHC23Q8IYP9 409 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 OR14K1Q8NGZ2 314 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 OR5P3Q8WZ94 311 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 GGHQ92820 318 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 TMEM80Q96HE8 168 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 MICU1Q9BPX6 476 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 RTL8AQ9BWD3 113 aa17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 ISG20L2Q9H9L3 353 aaKnown RBP17.75■□□□□ 0.43
SHCBP1-205ENST00000566016 FKBP14Q9NWM8 211 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms